RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CHAF1AQ13111 956 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 TCIRG1Q13488 830 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 SPECC1Q5M775 1068 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 TTLL5Q6EMB2 1281 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 HSCBQ8IWL3 235 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 EDEM1Q92611 657 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 BMP2KQ9NSY1 1161 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 MAPRE3Q9UPY8 281 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 ZSCAN20P17040 1043 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 ATP6V1AP38606 617 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 PWP1Q13610 501 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 PDE1CQ14123 709 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 TSHZ3Q63HK5 1081 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 MZT2AQ6P582 158 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 OTUD6BQ8N6M0 293 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 KMT5AQ9NQR1 393 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 SLC5A4Q9NY91 659 aa6.34□□□□□ -1.39
ECHDC1-222ENST00000531967 ZCCHC6Q5VYS8 1495 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 A6NCN8 305 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 APAF1O14727 1248 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 CPNE3O75131 537 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 ABLIM3O94929 683 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 IRS1P35568 1242 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 STK3Q13188 491 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 PABPC4Q13310 644 aaKnown RBP eCLIP6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 NBPF20Q3BBV1 942 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 WDR45BQ5MNZ6 344 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 DACT2Q5SW24 774 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 STRA8Q7Z7C7 330 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 ZSWIM2Q8NEG5 633 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 EPS8L3Q8TE67 593 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 GPKOWQ92917 476 aaPredicted RBP eCLIP6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 AGBL1Q96MI9 1066 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 SAGE1Q9NXZ1 904 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 PGAP2Q9UHJ9 254 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 LRFN2Q9ULH4 789 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 SYNPO2Q9UMS6 1093 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 DGKBQ9Y6T7 804 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 PHLDB1Q86UU1 1377 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 POTEFA5A3E0 1075 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 AGR2O95994 175 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 GBP2P32456 591 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 ZNF280AP59817 542 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 IRX5P78411 483 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 NEUROD1Q13562 356 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 C8orf34Q49A92 452 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 CXorf57Q6NSI4 855 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 C1orf228Q6PIY5 440 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 USP33Q8TEY7 942 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 ZMYM5Q9UJ78 669 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 PCDHGA4Q9Y5G9 962 aa6.33□□□□□ -1.4
ECHDC1-222ENST00000531967 A0A1W2PRU2 124 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 PHKG2P15735 406 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 CLCN6P51797 869 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 EIF5P55010 431 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 CBX2Q14781 532 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 KRT72Q14CN4 511 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 PPP2R5EQ16537 467 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 COBLL1Q53SF7 1204 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 TMEM67Q5HYA8 995 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 FBXL19Q6PCT2 694 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 DZIP3Q86Y13 1208 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 TNS4Q8IZW8 715 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 NDUFAF2Q8N183 169 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 FRS2Q8WU20 508 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 GJA10Q969M2 543 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 PAWRQ96IZ0 340 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 TMEM74Q96NL1 305 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 TSPAN10Q9H1Z9 355 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 OCEL1Q9H607 264 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 UBP1Q9NZI7 540 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 ZFATQ9P243 1243 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 ABCF2Q9UG63 623 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 PPT2Q9UMR5 302 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 CPEP16870 476 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 SEPT2Q15019 361 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 SLC39A7Q92504 469 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 TMEM87BQ96K49 555 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 ARHGAP9Q9BRR9 750 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 FBRSQ9HAH7 460 aa6.32□□□□□ -1.4
ECHDC1-222ENST00000531967 GJB6O95452 261 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 WASHC5Q12768 1159 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 SAFBQ15424 915 aaKnown RBP eCLIP6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 FXNQ16595 210 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 LARP1BQ659C4 914 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 CDK5RAP3Q96JB5 506 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 CDHR1Q96JP9 859 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 TSPAN7P41732 249 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 LHFPL2Q6ZUX7 228 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 PACS2Q86VP3 889 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 OR8H2Q8N162 312 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 NELL1Q92832 810 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 SRCIN1Q9C0H9 1055 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 KCNQ5Q9NR82 932 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 FAM50BQ9Y247 325 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 HCN4Q9Y3Q4 1203 aa6.31□□□□□ -1.4
ECHDC1-222ENST00000531967 TMEM229AB2RXF0 380 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 RPAINQ86UA6 219 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 TPH2Q8IWU9 490 aa6.3□□□□□ -1.4
ECHDC1-222ENST00000531967 WDR66Q8TBY9 1149 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms