RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 MPP2Q14168 576 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 VPS72Q15906 364 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 NFE2Q16621 373 aaPredicted RBP5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 CWF19L2Q2TBE0 894 aaKnown RBP5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 TKFCQ3LXA3 575 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 BRDTQ58F21 947 aaPredicted RBP5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 TMEM67Q5HYA8 995 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 TTC39BQ5VTQ0 682 aaPredicted RBP5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 DTHD1Q6ZMT9 781 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 Q6ZVU0 165 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 BTLAQ7Z6A9 289 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 CMTR1Q8N1G2 835 aaKnown RBP5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 C1orf127Q8N9H9 656 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 KDF1Q8NAX2 398 aaPredicted RBP5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 NINJ1Q92982 152 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 FERD3LQ96RJ6 166 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 SLC26A8Q96RN1 970 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 TRIM56Q9BRZ2 755 aaKnown RBP5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 ZNF700Q9H0M5 742 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 BSDC1Q9NW68 430 aaPredicted RBP5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 PTCH2Q9Y6C5 1203 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 KDM2BQ8NHM5 1336 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 MAN1A2O60476 641 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 ASMTLO95671 621 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 CNGA1P29973 690 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 GNALP38405 381 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 FAM160A1Q05DH4 1040 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 HSP90AB4PQ58FF6 505 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 RPS26P11Q5JNZ5 115 aaPredicted RBP5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 APBB1IPQ7Z5R6 666 aaPredicted RBP5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 FAM169BQ8N8A8 192 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 ABCB6Q9NP58 842 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 ZNRF3Q9ULT6 936 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 PPT2Q9UMR5 302 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 AKAP2Q9Y2D5 859 aa5.72□□□□□ -1.49
AC055878.1-201ENST00000531858 TSPAN6O43657 245 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 XYLBO75191 536 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 ALDH1L1O75891 902 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 TRIM37O94972 964 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 CPEP16870 476 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 CRKP46108 304 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 CDKN1CP49918 316 aaPredicted RBP5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 SSRP1Q08945 709 aaKnown RBP5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 SEZ6Q53EL9 994 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 TTBK2Q6IQ55 1244 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 THNSL2Q86YJ6 484 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 NIM1KQ8IY84 436 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 PNISRQ8TF01 805 aaKnown RBP5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 GATAD2BQ8WXI9 593 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 GRIP2Q9C0E4 1043 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 ST7Q9NRC1 585 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 SAMM50Q9Y512 469 aa5.71□□□□□ -1.5
AC055878.1-201ENST00000531858 MEN1O00255 615 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 PPFIA3O75145 1194 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 KRT18P05783 430 aaKnown RBP5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 NR3C2P08235 984 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 LMNB1P20700 586 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 ITPKAP23677 461 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 PLA2G4AP47712 749 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 CT47A1Q5JQC4 288 aaPredicted RBP5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 WDR44Q5JSH3 913 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 PERM1Q5SV97 790 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 SCARA3Q6AZY7 606 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 KANK3Q6NY19 840 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 CCDC81Q6ZN84 652 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 DDX42Q86XP3 938 aaKnown RBP eCLIP5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 CCNJLQ8IV13 435 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 FBXO41Q8TF61 875 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 NECAB3Q96P71 396 aaPredicted RBP5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 EPN3Q9H201 632 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 LIN7BQ9HAP6 207 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 ZMYM5Q9UJ78 669 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 MAPRE3Q9UPY8 281 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 TLR6Q9Y2C9 796 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 CD2APQ9Y5K6 639 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 TLL2Q9Y6L7 1015 aa5.7□□□□□ -1.5
AC055878.1-201ENST00000531858 SPATA31C2B4DYI2 1134 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 GJB6O95452 261 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 MYL1P05976 194 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 TFE3P19532 575 aaPredicted RBP5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 POU3F3P20264 500 aaPredicted RBP5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 NNTQ13423 1086 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 PPP2R5AQ15172 486 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 TTF1Q15361 905 aaPredicted RBP5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 MAP3K11Q16584 847 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 MAP9Q49MG5 647 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 C4orf17Q53FE4 359 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 PEAR1Q5VY43 1037 aaPredicted RBP5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 WWC2Q6AWC2 1192 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 NLRP8Q86W28 1048 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 JAMLQ86YT9 394 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 SVOPQ8N4V2 548 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 ZNF280CQ8ND82 737 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 CNTNAP3BQ96NU0 1288 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 TRERF1Q96PN7 1200 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 CAMKK2Q96RR4 588 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 CNTNAP3Q9BZ76 1288 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 MAF1Q9H063 256 aa5.69□□□□□ -1.5
AC055878.1-201ENST00000531858 MIR1-1HGQ9H1L0 117 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms