RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CALR3Q96L12 384 aaKnown RBP9.32□□□□□ -0.92
CSDE1-214ENST00000530886 GGA2Q9UJY4 613 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 C4AP0C0L4 1744 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 C4BP0C0L5 1744 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 ANKRD18BA2A2Z9 1011 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 CHGAP10645 457 aaKnown RBP9.31□□□□□ -0.92
CSDE1-214ENST00000530886 NEFHP12036 1026 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 VSTM4Q8IW00 320 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 GOLPH3LQ9H4A5 285 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 ODF2LQ9ULJ1 636 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 LRRIQ3A6PVS8 624 aaPredicted RBP9.31□□□□□ -0.92
CSDE1-214ENST00000530886 SMTNP53814 917 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 TBX2Q13207 712 aaPredicted RBP9.31□□□□□ -0.92
CSDE1-214ENST00000530886 TOB2Q14106 344 aaPredicted RBP9.31□□□□□ -0.92
CSDE1-214ENST00000530886 B4GALNT4Q76KP1 1039 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 IQCA1Q86XH1 822 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 MAB21L3Q8N8X9 362 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 CCDC102AQ96A19 550 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 TFIP11Q9UBB9 837 aaKnown RBP9.31□□□□□ -0.92
CSDE1-214ENST00000530886 DIP2CQ9Y2E4 1556 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 CEMIPQ8WUJ3 1361 aa9.31□□□□□ -0.92
CSDE1-214ENST00000530886 A0A1B0GUA9 196 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 ZEB2O60315 1214 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 KINO60870 393 aaKnown RBP9.3□□□□□ -0.92
CSDE1-214ENST00000530886 RASSF9O75901 435 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 ARHGAP25P42331 645 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 IRAK1P51617 712 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 RCSD1Q6JBY9 416 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 FERMT3Q86UX7 667 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 CCDC50Q8IVM0 306 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 BAG1Q99933 345 aaPredicted RBP9.3□□□□□ -0.92
CSDE1-214ENST00000530886 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 GNAI2P04899 355 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 MCM3P25205 808 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 RWDD2BP57060 319 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 PPFIA1Q13136 1202 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 LARP1Q6PKG0 1096 aaKnown RBP9.3□□□□□ -0.92
CSDE1-214ENST00000530886 CCDC73Q6ZRK6 1079 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 ARMC2Q8NEN0 867 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 GRIN2DO15399 1336 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 EIF3HO15372 352 aaKnown RBP eCLIP9.3□□□□□ -0.92
CSDE1-214ENST00000530886 CCT5P48643 541 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 FANCCQ00597 558 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 DRP2Q13474 957 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 AP1ARQ63HQ0 302 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 CCDC26Q8TAB7 109 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 JAKMIP1Q96N16 626 aaKnown RBP9.3□□□□□ -0.92
CSDE1-214ENST00000530886 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
CSDE1-214ENST00000530886 NWD2Q9ULI1 1742 aa9.3□□□□□ -0.92
CSDE1-214ENST00000530886 RICTORQ6R327 1708 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 SHTN1A0MZ66 631 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 WDHD1O75717 1129 aaPredicted RBP9.29□□□□□ -0.92
CSDE1-214ENST00000530886 VSNL1P62760 191 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 TRAF1Q13077 416 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 FMR1NBQ8N0W7 255 aaPredicted RBP9.29□□□□□ -0.92
CSDE1-214ENST00000530886 PLEKHA4Q9H4M7 779 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 ATP6V0A4Q9HBG4 840 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 SBNO1A3KN83 1393 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 OVOS2A0A0J9YW53 1432 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 OVOS2Q6IE36 1432 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 F6X3S4 739 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 IPO7O95373 1038 aaKnown RBP9.29□□□□□ -0.92
CSDE1-214ENST00000530886 NLRP12P59046 1061 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 WHAMMP3Q1A5X7 153 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 CNTROBQ8N137 903 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 HOMER3Q9NSC5 361 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 SPATS2LQ9NUQ6 558 aaKnown RBP9.29□□□□□ -0.92
CSDE1-214ENST00000530886 HPCAL4Q9UM19 191 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 TAF6LQ9Y6J9 622 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 CAPN7Q9Y6W3 813 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 A0A1W2PQ27 194 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 A0A1W2PQ64 194 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 A0A1W2PQD8 194 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 RAB11FIP3O75154 756 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 PSMA5P28066 241 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 BRAPQ7Z569 592 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 IGSF22Q8N9C0 903 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 SH3GL2Q99962 352 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 USP44Q9H0E7 712 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 BATF3Q9NR55 127 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
CSDE1-214ENST00000530886 PARP4Q9UKK3 1724 aaKnown RBP9.29□□□□□ -0.92
CSDE1-214ENST00000530886 MEFVO15553 781 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-214ENST00000530886 IDI1Q13907 227 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 ILDR1Q86SU0 546 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-214ENST00000530886 RUFY2Q8WXA3 655 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 SMARCC1Q92922 1105 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-214ENST00000530886 KAT14Q9H8E8 782 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 CABP1Q9NZU7 370 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 COL15A1P39059 1388 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 MED23Q9ULK4 1368 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 SIPA1L3O60292 1781 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-214ENST00000530886 CCNHP51946 323 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-214ENST00000530886 PIP4K2BP78356 416 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 SKOR1P84550 965 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 CDCA2Q69YH5 1023 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-214ENST00000530886 TTC19Q6DKK2 380 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-214ENST00000530886 NAA16Q6N069 864 aaPredicted RBP9.28□□□□□ -0.92
CSDE1-214ENST00000530886 NECAB1Q8N987 351 aa9.28□□□□□ -0.92
CSDE1-214ENST00000530886 FAM76AQ8TAV0 307 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms