RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 KIAA0319Q5VV43 1072 aa8.16□□□□□ -1.1
CSDE1-212ENST00000529046 Q8N3U1 123 aa8.16□□□□□ -1.1
CSDE1-212ENST00000529046 TCF12Q99081 682 aa8.16□□□□□ -1.1
CSDE1-212ENST00000529046 RUSC1Q9BVN2 902 aa8.16□□□□□ -1.1
CSDE1-212ENST00000529046 GRIA4P48058 902 aa8.15□□□□□ -1.1
CSDE1-212ENST00000529046 ANKRD34AQ69YU3 496 aa8.15□□□□□ -1.1
CSDE1-212ENST00000529046 UTP4Q969X6 686 aaKnown RBP8.15□□□□□ -1.1
CSDE1-212ENST00000529046 USP26Q9BXU7 913 aa8.15□□□□□ -1.1
CSDE1-212ENST00000529046 EHD4Q9H223 541 aa8.15□□□□□ -1.1
CSDE1-212ENST00000529046 MROH2BQ7Z745 1585 aa8.14□□□□□ -1.11
CSDE1-212ENST00000529046 LAMC3Q9Y6N6 1575 aa8.14□□□□□ -1.11
CSDE1-212ENST00000529046 PNMA6FA0A0J9YX94 578 aa8.14□□□□□ -1.11
CSDE1-212ENST00000529046 SCO2A0A1W2PP80 73 aa8.14□□□□□ -1.11
CSDE1-212ENST00000529046 DHX15O43143 795 aaKnown RBP8.14□□□□□ -1.11
CSDE1-212ENST00000529046 SART1O43290 800 aaKnown RBP8.14□□□□□ -1.11
CSDE1-212ENST00000529046 PCDH1Q08174 1060 aa8.14□□□□□ -1.11
CSDE1-212ENST00000529046 EAPPQ56P03 285 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-212ENST00000529046 CCDC74AQ96AQ1 378 aa8.14□□□□□ -1.11
CSDE1-212ENST00000529046 FAM46AQ96IP4 442 aaKnown RBP8.14□□□□□ -1.11
CSDE1-212ENST00000529046 CLEC4MQ9H2X3 399 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-212ENST00000529046 RAXQ9Y2V3 346 aa8.14□□□□□ -1.11
CSDE1-212ENST00000529046 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-212ENST00000529046 PRPF40AO75400 957 aaKnown RBP8.13□□□□□ -1.11
CSDE1-212ENST00000529046 FSTP19883 344 aa8.13□□□□□ -1.11
CSDE1-212ENST00000529046 FGD1P98174 961 aa8.13□□□□□ -1.11
CSDE1-212ENST00000529046 GSTM4Q03013 218 aa8.13□□□□□ -1.11
CSDE1-212ENST00000529046 SPRED3Q2MJR0 410 aa8.13□□□□□ -1.11
CSDE1-212ENST00000529046 ALG1LQ6GMV1 187 aa8.13□□□□□ -1.11
CSDE1-212ENST00000529046 FDX2Q6P4F2 183 aa8.13□□□□□ -1.11
CSDE1-212ENST00000529046 ARMC10Q8N2F6 343 aa8.13□□□□□ -1.11
CSDE1-212ENST00000529046 NESP48681 1621 aa8.13□□□□□ -1.11
CSDE1-212ENST00000529046 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
CSDE1-212ENST00000529046 GADD45BO75293 160 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-212ENST00000529046 LCE3BQ5TA77 95 aa8.12□□□□□ -1.11
CSDE1-212ENST00000529046 MYRFLQ96LU7 910 aa8.12□□□□□ -1.11
CSDE1-212ENST00000529046 STOML1Q9UBI4 398 aa8.12□□□□□ -1.11
CSDE1-212ENST00000529046 LOC100289279A0A1B0GTE1 492 aa8.11□□□□□ -1.11
CSDE1-212ENST00000529046 MEGF11A6BM72 1044 aa8.11□□□□□ -1.11
CSDE1-212ENST00000529046 LDHBP07195 334 aaKnown RBP8.11□□□□□ -1.11
CSDE1-212ENST00000529046 MAPK8P45983 427 aa8.11□□□□□ -1.11
CSDE1-212ENST00000529046 PREPP48147 710 aa8.11□□□□□ -1.11
CSDE1-212ENST00000529046 SETDB2Q96T68 719 aa8.11□□□□□ -1.11
CSDE1-212ENST00000529046 WWC3Q9ULE0 1092 aa8.11□□□□□ -1.11
CSDE1-212ENST00000529046 CADPSQ9ULU8 1353 aa8.1□□□□□ -1.11
CSDE1-212ENST00000529046 ZNF16P17020 682 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-212ENST00000529046 ZNF423Q2M1K9 1284 aa8.1□□□□□ -1.11
CSDE1-212ENST00000529046 NUTM2GQ5VZR2 741 aa8.1□□□□□ -1.11
CSDE1-212ENST00000529046 PRPF40BQ6NWY9 871 aaKnown RBP8.1□□□□□ -1.11
CSDE1-212ENST00000529046 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-212ENST00000529046 SLC51AQ86UW1 340 aa8.1□□□□□ -1.11
CSDE1-212ENST00000529046 FRMD6Q96NE9 622 aa8.1□□□□□ -1.11
CSDE1-212ENST00000529046 BCL2L13Q9BXK5 485 aa8.1□□□□□ -1.11
CSDE1-212ENST00000529046 TMPRSS13Q9BYE2 586 aa8.1□□□□□ -1.11
CSDE1-212ENST00000529046 ZNF576Q9H609 170 aa8.1□□□□□ -1.11
CSDE1-212ENST00000529046 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
CSDE1-212ENST00000529046 GSC2O15499 205 aa8.09□□□□□ -1.11
CSDE1-212ENST00000529046 GAS2O43903 313 aaKnown RBP8.09□□□□□ -1.11
CSDE1-212ENST00000529046 ITPKAP23677 461 aa8.09□□□□□ -1.11
CSDE1-212ENST00000529046 TAGLNQ01995 201 aaKnown RBP8.09□□□□□ -1.11
CSDE1-212ENST00000529046 GLIS3Q8NEA6 775 aa8.09□□□□□ -1.11
CSDE1-212ENST00000529046 DDX54Q8TDD1 881 aaKnown RBP8.09□□□□□ -1.11
CSDE1-212ENST00000529046 EPS8L3Q8TE67 593 aaKnown RBP8.09□□□□□ -1.11
CSDE1-212ENST00000529046 CYP4F12Q9HCS2 524 aa8.09□□□□□ -1.11
CSDE1-212ENST00000529046 ABCB6Q9NP58 842 aa8.09□□□□□ -1.11
CSDE1-212ENST00000529046 HIF3AQ9Y2N7 669 aa8.09□□□□□ -1.11
CSDE1-212ENST00000529046 DLGAP3O95886 979 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 B3GALT4O96024 378 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 CYP11A1P05108 521 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 BMP3P12645 472 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 DAB2P98082 770 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 ATP2B2Q01814 1243 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 PTPN12Q05209 780 aaKnown RBP8.08□□□□□ -1.12
CSDE1-212ENST00000529046 GRM2Q14416 872 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 FAM20CQ8IXL6 584 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 C12orf50Q8NA57 414 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-212ENST00000529046 SMG8Q8ND04 991 aaKnown RBP8.08□□□□□ -1.12
CSDE1-212ENST00000529046 NRSN2Q9GZP1 204 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 KCNF1Q9H3M0 494 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 RNF112Q9ULX5 631 aa8.08□□□□□ -1.12
CSDE1-212ENST00000529046 THOC2Q8NI27 1593 aaKnown RBP8.07□□□□□ -1.12
CSDE1-212ENST00000529046 TMEM238LA0A1B0GVL6 79 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 GIPC1O14908 333 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 IGLV1-40P01703 118 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 GNA15P30679 374 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 LRP8Q14114 963 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 EXOSC6Q5RKV6 272 aaKnown RBP8.07□□□□□ -1.12
CSDE1-212ENST00000529046 ARTNQ5T4W7 220 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 TMC4Q7Z404 712 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 GIPC2Q8TF65 315 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 C7orf69Q9H7B7 122 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 SUGCTQ9HAC7 445 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 ZFP64Q9NPA5 681 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 NLRP2Q9NX02 1062 aa8.07□□□□□ -1.12
CSDE1-212ENST00000529046 TIAF1O95411 115 aa8.06□□□□□ -1.12
CSDE1-212ENST00000529046 MAOBP27338 520 aa8.06□□□□□ -1.12
CSDE1-212ENST00000529046 POU4F3Q15319 338 aa8.06□□□□□ -1.12
CSDE1-212ENST00000529046 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.06□□□□□ -1.12
CSDE1-212ENST00000529046 HP1BP3Q5SSJ5 553 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-212ENST00000529046 PI16Q6UXB8 463 aa8.06□□□□□ -1.12
CSDE1-212ENST00000529046 CLEC10AQ8IUN9 316 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms