RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 UBE3CQ15386 1083 aa9.7□□□□□ -0.86
SOX6-210ENST00000528252 IMMTQ16891 758 aaKnown RBP9.7□□□□□ -0.86
SOX6-210ENST00000528252 CHST3Q7LGC8 479 aa9.7□□□□□ -0.86
SOX6-210ENST00000528252 RBSNQ9H1K0 784 aa9.7□□□□□ -0.86
SOX6-210ENST00000528252 GDPD2Q9HCC8 539 aa9.7□□□□□ -0.86
SOX6-210ENST00000528252 BSDC1Q9NW68 430 aaPredicted RBP9.7□□□□□ -0.86
SOX6-210ENST00000528252 NPHP1O15259 732 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 EXOSC10Q01780 885 aaKnown RBP9.69□□□□□ -0.86
SOX6-210ENST00000528252 PDLIM2Q96JY6 352 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 MINPP1Q9UNW1 487 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 COL4A1P02462 1669 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 NHSQ6T4R5 1651 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 TCRBV5S4A2TA0A5A2 114 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 VPS37CA5D8V6 355 aaPredicted RBP9.69□□□□□ -0.86
SOX6-210ENST00000528252 APPP05067 770 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 GYG1P46976 350 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 RPS8P62241 208 aaKnown RBP9.69□□□□□ -0.86
SOX6-210ENST00000528252 MAP3K12Q12852 859 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 LARP1BQ659C4 914 aaKnown RBP9.69□□□□□ -0.86
SOX6-210ENST00000528252 MAGEB6Q8N7X4 407 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 MTMR6Q9Y217 621 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 CAVIN1Q6NZI2 390 aaKnown RBP9.69□□□□□ -0.86
SOX6-210ENST00000528252 GPT2Q8TD30 523 aa9.69□□□□□ -0.86
SOX6-210ENST00000528252 BCORQ6W2J9 1755 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 ZNF213O14771 459 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 F13A1P00488 732 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 APOBRQ0VD83 1088 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 MYRIPQ8NFW9 859 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 GTF3C6Q969F1 213 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 AIDAQ96BJ3 306 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.68□□□□□ -0.86
SOX6-210ENST00000528252 JAK2O60674 1132 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 TRIM37O94972 964 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 CDK11BP21127 795 aaKnown RBP9.68□□□□□ -0.86
SOX6-210ENST00000528252 UBE4AQ14139 1066 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 NFIXQ14938 502 aa9.68□□□□□ -0.86
SOX6-210ENST00000528252 STRBPQ96SI9 672 aaKnown RBP9.68□□□□□ -0.86
SOX6-210ENST00000528252 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
SOX6-210ENST00000528252 DNTTIP2Q5QJE6 756 aaKnown RBP9.67□□□□□ -0.86
SOX6-210ENST00000528252 KRT27Q7Z3Y8 459 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 AGXT2Q9BYV1 514 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 GPHNQ9NQX3 736 aaPredicted RBP9.67□□□□□ -0.86
SOX6-210ENST00000528252 LRP2BPQ9P2M1 347 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 MBD4O95243 580 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 PDCP20941 246 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 SCRN1Q12765 414 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 USP48Q86UV5 1035 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 FERMT3Q86UX7 667 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 VPS37DQ86XT2 251 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 RBM27Q9P2N5 1060 aaKnown RBP9.67□□□□□ -0.86
SOX6-210ENST00000528252 ABCF2Q9UG63 623 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 CNPY2Q9Y2B0 182 aa9.67□□□□□ -0.86
SOX6-210ENST00000528252 TAF1P21675 1872 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 ZNF804BA4D1E1 1349 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 CCT2P78371 535 aaKnown RBP9.66□□□□□ -0.86
SOX6-210ENST00000528252 CAVIN4Q5BKX8 364 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 RALYLQ86SE5 291 aaKnown RBP9.66□□□□□ -0.86
SOX6-210ENST00000528252 DDX11Q96FC9 970 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 FAM84BQ96KN1 310 aaPredicted RBP9.66□□□□□ -0.86
SOX6-210ENST00000528252 ARMT1Q9H993 441 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 GNL3LQ9NVN8 582 aaKnown RBP9.66□□□□□ -0.86
SOX6-210ENST00000528252 ATP6V1DQ9Y5K8 247 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 PFKFB2O60825 505 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 GADD45BO75293 160 aaPredicted RBP9.66□□□□□ -0.86
SOX6-210ENST00000528252 KLRK1P26718 216 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 TM4SF1P30408 202 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 ZSCAN23Q3MJ62 389 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 CDC37L1Q7L3B6 337 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 NCOA7Q8NI08 942 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 NCOA5Q9HCD5 579 aaKnown RBP9.66□□□□□ -0.86
SOX6-210ENST00000528252 DENND2AQ9ULE3 1009 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 SCN7AQ01118 1682 aa9.66□□□□□ -0.86
SOX6-210ENST00000528252 PRC1O43663 620 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 PDIA3P30101 505 aaKnown RBP9.65□□□□□ -0.86
SOX6-210ENST00000528252 MCM5P33992 734 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 ZNF445P59923 1031 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 DNM1Q05193 864 aaKnown RBP9.65□□□□□ -0.86
SOX6-210ENST00000528252 MB21D2Q8IYB1 491 aaPredicted RBP9.65□□□□□ -0.86
SOX6-210ENST00000528252 CNBD1Q8NA66 436 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 MIGA1Q8NAN2 632 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 NBPF3Q9H094 633 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 LAMB2P55268 1798 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 MYO5AQ9Y4I1 1855 aaKnown RBP9.65□□□□□ -0.86
SOX6-210ENST00000528252 PATL2C9JE40 543 aaKnown RBP9.65□□□□□ -0.86
SOX6-210ENST00000528252 FIBPO43427 364 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 PRKAB2O43741 272 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 PPFIA3O75145 1194 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 MBD3O95983 291 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
SOX6-210ENST00000528252 TRDNQ13061 729 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 ZNF771Q7L3S4 317 aaPredicted RBP9.65□□□□□ -0.86
SOX6-210ENST00000528252 TBC1D10CQ8IV04 446 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 EPB41L4AQ9HCS5 686 aaPredicted RBP9.65□□□□□ -0.86
SOX6-210ENST00000528252 RAI14Q9P0K7 980 aa9.65□□□□□ -0.86
SOX6-210ENST00000528252 CARMIL3Q8ND23 1372 aa9.64□□□□□ -0.87
SOX6-210ENST00000528252 CYP7A1P22680 504 aa9.64□□□□□ -0.87
SOX6-210ENST00000528252 ANTXR2P58335 489 aa9.64□□□□□ -0.87
SOX6-210ENST00000528252 TAF3Q5VWG9 929 aa9.64□□□□□ -0.87
SOX6-210ENST00000528252 FAM173BQ6P4H8 233 aa9.64□□□□□ -0.87
SOX6-210ENST00000528252 IFNL3Q8IZI9 196 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms