RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ADAM21Q9UKJ8 722 aa16.89■□□□□ 0.29
CAPN1-214ENST00000528165 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.29
CAPN1-214ENST00000528165 MYO1CO00159 1063 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 DHX16O60231 1041 aaKnown RBP16.88■□□□□ 0.29
CAPN1-214ENST00000528165 GYS2P54840 703 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 PTPN12Q05209 780 aaKnown RBP16.88■□□□□ 0.29
CAPN1-214ENST00000528165 TMEM139Q8IV31 216 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 PSD3Q9NYI0 1048 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 A0A0G2JLW4 131 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 MYO1BO43795 1136 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 TSPOAP1O95153 1857 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
CAPN1-214ENST00000528165 PTPN21Q16825 1174 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 C10orf67Q8IYJ2 551 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 PDILTQ8N807 584 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 RSPH14Q9UHP6 348 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 GOLIM4O00461 696 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 LONRF2Q1L5Z9 754 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 MYD88Q99836 296 aa16.88■□□□□ 0.29
CAPN1-214ENST00000528165 MROH7-TTC4A0A0A0MT08 1334 aa16.87■□□□□ 0.29
CAPN1-214ENST00000528165 CCDC151A5D8V7 595 aa16.87■□□□□ 0.29
CAPN1-214ENST00000528165 MARCKSP29966 332 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-214ENST00000528165 TXLNAP40222 546 aa16.87■□□□□ 0.29
CAPN1-214ENST00000528165 FANCLQ9NW38 375 aa16.87■□□□□ 0.29
CAPN1-214ENST00000528165 UBR1Q8IWV7 1749 aa16.87■□□□□ 0.29
CAPN1-214ENST00000528165 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
CAPN1-214ENST00000528165 RFX5P48382 616 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-214ENST00000528165 PAG1Q9NWQ8 432 aa16.87■□□□□ 0.29
CAPN1-214ENST00000528165 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
CAPN1-214ENST00000528165 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 CPLX1O14810 134 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 STX10O60499 249 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 WDHD1O75717 1129 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-214ENST00000528165 PDIA6Q15084 440 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 MYL6BP14649 208 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 PNOCQ13519 176 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 SLC39A14Q15043 492 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 BRD3Q15059 726 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 DHX58Q96C10 678 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 LCMT1Q9UIC8 334 aa16.86■□□□□ 0.29
CAPN1-214ENST00000528165 KIF28PB7ZC32 967 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 TRIM66O15016 1216 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 ZMYM1Q5SVZ6 1142 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 TOGARAM2Q6ZUX3 1019 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 KIFC2Q96AC6 838 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
CAPN1-214ENST00000528165 EFCC1Q9HA90 598 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 GPHNQ9NQX3 736 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-214ENST00000528165 GJB4Q9NTQ9 266 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 GOLGA8BA8MQT2 603 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 H3BQF6 201 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 ACTN2P35609 894 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 KIF23Q02241 960 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-214ENST00000528165 LEKR1Q6ZMV7 388 aa16.85■□□□□ 0.29
CAPN1-214ENST00000528165 CCDC12Q8WUD4 166 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-214ENST00000528165 METTL22Q9BUU2 404 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-214ENST00000528165 FAM69CQ0P6D2 419 aa16.84■□□□□ 0.29
CAPN1-214ENST00000528165 FBXL16Q8N461 479 aa16.84■□□□□ 0.29
CAPN1-214ENST00000528165 JMYQ8N9B5 988 aa16.84■□□□□ 0.29
CAPN1-214ENST00000528165 NEUROD6Q96NK8 337 aa16.84■□□□□ 0.29
CAPN1-214ENST00000528165 KLF18A0A0U1RQI7 1052 aa16.84■□□□□ 0.29
CAPN1-214ENST00000528165 SRLQ86TD4 932 aa16.84■□□□□ 0.29
CAPN1-214ENST00000528165 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
CAPN1-214ENST00000528165 INTS13Q9NVM9 706 aa16.84■□□□□ 0.29
CAPN1-214ENST00000528165 SETD1BQ9UPS6 1966 aaKnown RBP16.84■□□□□ 0.29
CAPN1-214ENST00000528165 TBX2Q13207 712 aaPredicted RBP16.83■□□□□ 0.29
CAPN1-214ENST00000528165 TTLL5Q6EMB2 1281 aa16.83■□□□□ 0.29
CAPN1-214ENST00000528165 C19orf44Q9H6X5 657 aa16.83■□□□□ 0.29
CAPN1-214ENST00000528165 RRP15Q9Y3B9 282 aaKnown RBP16.83■□□□□ 0.29
CAPN1-214ENST00000528165 EID1Q9Y6B2 187 aa16.83■□□□□ 0.29
CAPN1-214ENST00000528165 MAP2K7O14733 419 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 UBE3BQ7Z3V4 1068 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 ZSWIM4Q9H7M6 989 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 HPSEQ9Y251 543 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 MAST3O60307 1309 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 LTN1O94822 1766 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 ADKP55263 362 aaKnown RBP16.83■□□□□ 0.28
CAPN1-214ENST00000528165 CHMP4BP1P59074 171 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 KARSQ15046 597 aaKnown RBP16.83■□□□□ 0.28
CAPN1-214ENST00000528165 HSP90AA4PQ58FG1 418 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 SPECC1LQ69YQ0 1117 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 COPS6Q7L5N1 327 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 TC2NQ8N9U0 490 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 IQUBQ8NA54 791 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 ANKRD24Q8TF21 1146 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 VPS18Q9P253 973 aa16.83■□□□□ 0.28
CAPN1-214ENST00000528165 IVLP07476 585 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 MCM6Q14566 821 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 SHC4Q6S5L8 630 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 OVOS2A0A0G2JMS6 1433 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 PXDNQ92626 1479 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 USP54Q70EL1 1684 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 HDXQ7Z353 690 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 RAB11FIP4Q86YS3 637 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 DESI2Q9BSY9 194 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 PDE11AQ9HCR9 933 aa16.82■□□□□ 0.28
CAPN1-214ENST00000528165 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
CAPN1-214ENST00000528165 PRC1O43663 620 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms