RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 RBM6P78332 1123 aaKnown RBP17.38■□□□□ 0.37
USP47-207ENST00000527733 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
USP47-207ENST00000527733 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
USP47-207ENST00000527733 ANGEL1Q9UNK9 670 aaKnown RBP17.38■□□□□ 0.37
USP47-207ENST00000527733 PDE6AP16499 860 aa17.38■□□□□ 0.37
USP47-207ENST00000527733 HLFQ16534 295 aa17.38■□□□□ 0.37
USP47-207ENST00000527733 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
USP47-207ENST00000527733 A0A0D9SFI3 127 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 UBA7P41226 1012 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 MFSD14BQ5SR56 506 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 SUSD4Q5VX71 490 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 SPC24Q8NBT2 197 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 CALML3P27482 149 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 PHKA1P46020 1223 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 TM6SF1Q9BZW5 370 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 ZNF804BA4D1E1 1349 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 GTF2IP78347 998 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 KLHL40Q2TBA0 621 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 KCNG4Q8TDN1 519 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 TTLL11Q8NHH1 800 aa17.37■□□□□ 0.37
USP47-207ENST00000527733 SSH2Q76I76 1423 aa17.36■□□□□ 0.37
USP47-207ENST00000527733 RXRAP19793 462 aa17.36■□□□□ 0.37
USP47-207ENST00000527733 ADORA1P30542 326 aa17.36■□□□□ 0.37
USP47-207ENST00000527733 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
USP47-207ENST00000527733 LEMD3Q9Y2U8 911 aa17.36■□□□□ 0.37
USP47-207ENST00000527733 PATL2C9JE40 543 aaKnown RBP17.36■□□□□ 0.37
USP47-207ENST00000527733 PRDM1O75626 825 aa17.36■□□□□ 0.37
USP47-207ENST00000527733 NAPAP54920 295 aa17.36■□□□□ 0.37
USP47-207ENST00000527733 PPFIBP1Q86W92 1011 aa17.36■□□□□ 0.37
USP47-207ENST00000527733 CKAP2LQ8IYA6 745 aa17.36■□□□□ 0.37
USP47-207ENST00000527733 TLR7Q9NYK1 1049 aaKnown RBP17.36■□□□□ 0.37
USP47-207ENST00000527733 KCNQ2O43526 872 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 BBOX1O75936 387 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 MTX1Q13505 466 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 PYM1Q9BRP8 204 aaKnown RBP17.35■□□□□ 0.37
USP47-207ENST00000527733 RBM28Q9NW13 759 aaKnown RBP17.35■□□□□ 0.37
USP47-207ENST00000527733 NARFQ9UHQ1 456 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 XDHP47989 1333 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 SPATA31A1Q5TZJ5 1347 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 HSPA1LP34931 641 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 FAM43AQ8N2R8 423 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 GJA3Q9Y6H8 435 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 NAP1L1P55209 391 aaKnown RBP17.35■□□□□ 0.37
USP47-207ENST00000527733 MST1RQ04912 1400 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 RRP36Q96EU6 259 aaKnown RBP17.35■□□□□ 0.37
USP47-207ENST00000527733 TANGO6Q9C0B7 1094 aa17.35■□□□□ 0.37
USP47-207ENST00000527733 ZNHIT6Q9NWK9 470 aaKnown RBP17.35■□□□□ 0.37
USP47-207ENST00000527733 CCDC70Q6NSX1 233 aa17.34■□□□□ 0.37
USP47-207ENST00000527733 CALML4Q96GE6 196 aa17.34■□□□□ 0.37
USP47-207ENST00000527733 CNPY2Q9Y2B0 182 aa17.34■□□□□ 0.37
USP47-207ENST00000527733 NF2P35240 595 aa17.34■□□□□ 0.37
USP47-207ENST00000527733 PDE4CQ08493 712 aa17.34■□□□□ 0.37
USP47-207ENST00000527733 NIM1KQ8IY84 436 aa17.34■□□□□ 0.37
USP47-207ENST00000527733 C6orf50Q9HD87 102 aa17.34■□□□□ 0.37
USP47-207ENST00000527733 SYT1P21579 422 aa17.34■□□□□ 0.37
USP47-207ENST00000527733 DNM1Q05193 864 aaKnown RBP17.34■□□□□ 0.37
USP47-207ENST00000527733 SEC62Q99442 399 aaKnown RBP17.34■□□□□ 0.37
USP47-207ENST00000527733 CPDO75976 1380 aa17.34■□□□□ 0.37
USP47-207ENST00000527733 SASH1O94885 1247 aa17.33■□□□□ 0.37
USP47-207ENST00000527733 LMOD1P29536 600 aaPredicted RBP17.33■□□□□ 0.37
USP47-207ENST00000527733 EIF6P56537 245 aaKnown RBP17.33■□□□□ 0.37
USP47-207ENST00000527733 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.37
USP47-207ENST00000527733 UBE3CQ15386 1083 aa17.33■□□□□ 0.37
USP47-207ENST00000527733 PANK2Q9BZ23 570 aa17.33■□□□□ 0.37
USP47-207ENST00000527733 NBPF26B4DH59 902 aa17.33■□□□□ 0.37
USP47-207ENST00000527733 NBPF10Q6P3W6 841 aaKnown RBP17.33■□□□□ 0.37
USP47-207ENST00000527733 NBPF15Q8N660 670 aa17.33■□□□□ 0.37
USP47-207ENST00000527733 SEMA3EO15041 775 aa17.33■□□□□ 0.36
USP47-207ENST00000527733 LLPHQ9BRT6 129 aaKnown RBP17.33■□□□□ 0.36
USP47-207ENST00000527733 WWC2Q6AWC2 1192 aa17.33■□□□□ 0.36
USP47-207ENST00000527733 KANK3Q6NY19 840 aa17.33■□□□□ 0.36
USP47-207ENST00000527733 TTF2Q9UNY4 1162 aaKnown RBP17.33■□□□□ 0.36
USP47-207ENST00000527733 TRIM75PA6NK02 468 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 E7EWF7 191 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 ADRA2BP18089 450 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 PTH1RQ03431 593 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 AKNAD1Q5T1N1 836 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 MAPKAPK5Q8IW41 473 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
USP47-207ENST00000527733 HSPD1P10809 573 aaKnown RBP17.32■□□□□ 0.36
USP47-207ENST00000527733 CTDSPL2Q05D32 466 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 KLHL10Q6JEL2 608 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 CLEC11AQ9Y240 323 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 COL15A1P39059 1388 aa17.32■□□□□ 0.36
USP47-207ENST00000527733 ARHGEF28Q8N1W1 1705 aaKnown RBP17.32■□□□□ 0.36
USP47-207ENST00000527733 PARP1P09874 1014 aaKnown RBP17.31■□□□□ 0.36
USP47-207ENST00000527733 BRAPQ7Z569 592 aa17.31■□□□□ 0.36
USP47-207ENST00000527733 USP48Q86UV5 1035 aa17.31■□□□□ 0.36
USP47-207ENST00000527733 TGFBRAP1Q8WUH2 860 aa17.31■□□□□ 0.36
USP47-207ENST00000527733 TEKT1Q969V4 418 aa17.31■□□□□ 0.36
USP47-207ENST00000527733 AMPD3Q01432 767 aa17.31■□□□□ 0.36
USP47-207ENST00000527733 TRIM28Q13263 835 aaKnown RBP17.31■□□□□ 0.36
USP47-207ENST00000527733 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
USP47-207ENST00000527733 ISCA1Q9BUE6 129 aa17.31■□□□□ 0.36
USP47-207ENST00000527733 GNA11P29992 359 aa17.31■□□□□ 0.36
USP47-207ENST00000527733 TTLL5Q6EMB2 1281 aa17.31■□□□□ 0.36
USP47-207ENST00000527733 SYKP43405 635 aa17.31■□□□□ 0.36
USP47-207ENST00000527733 CFAP100Q494V2 611 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms