RNA–Protein interactions for RNA: ENST00000524792.5

ATM-204, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2

Gene ATM, Length 5,912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-204ENST00000524792 PPFIA3O75145 1194 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 LUC7L3O95232 432 aaKnown RBP4.43□□□□□ -1.7
ATM-204ENST00000524792 ST13P50502 369 aaKnown RBP4.43□□□□□ -1.7
ATM-204ENST00000524792 PRMT2P55345 433 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 SLC39A6Q13433 755 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 NCAPG2Q86XI2 1143 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 GPC2Q8N158 579 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 ARHGEF1Q92888 912 aaKnown RBP4.43□□□□□ -1.7
ATM-204ENST00000524792 HMX1Q9NP08 348 aaPredicted RBP4.43□□□□□ -1.7
ATM-204ENST00000524792 CWC25Q9NXE8 425 aaPredicted RBP4.43□□□□□ -1.7
ATM-204ENST00000524792 COG6Q9Y2V7 657 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 AGLP35573 1532 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 MED14O60244 1454 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 COL17A1Q9UMD9 1497 aaPredicted RBP4.43□□□□□ -1.7
ATM-204ENST00000524792 UBE2Q2LH0YL09 131 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 GHRP10912 638 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 LSP1P33241 339 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 GTF2F1P35269 517 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATM-204ENST00000524792 E2F5Q15329 346 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 CCDC13Q8IYE1 715 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 TEX9Q8N6V9 391 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 CLUAP1Q96AJ1 413 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 UNKQ9C0B0 810 aaKnown RBP4.43□□□□□ -1.7
ATM-204ENST00000524792 RUSC2Q8N2Y8 1516 aa4.43□□□□□ -1.7
ATM-204ENST00000524792 USP17L3A6NCW0 530 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 USP17L4A6NCW7 530 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 TRAF1Q13077 416 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 ZSCAN23Q3MJ62 389 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 STYK1Q6J9G0 422 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 LEKR1Q6ZMV7 388 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 USP17L1Q7RTZ2 530 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 RSPH3Q86UC2 560 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 SPDL1Q96EA4 605 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 LNPKQ9C0E8 428 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 ZBED4O75132 1171 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 DDAH1O94760 285 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 VEGFBP49765 207 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 GTF2IP78347 998 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 TAF7Q15545 349 aaPredicted RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 SPINK5Q9NQ38 1064 aaPredicted RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 ADD3Q9UEY8 706 aaKnown RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 ZC3H4Q9UPT8 1303 aaKnown RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 IFIT2P09913 472 aaKnown RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 ATXN3P54252 364 aaPredicted RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 PPP2R5CQ13362 524 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 TTLL5Q6EMB2 1281 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 FSIP1Q8NA03 581 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 GOLGA1Q92805 767 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 PIDD1Q9HB75 910 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 ZNHIT6Q9NWK9 470 aaKnown RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 ZMYND8Q9ULU4 1186 aaPredicted RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 RGS12O14924 1447 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 LRRC7Q96NW7 1537 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 ESYT2A0FGR8 921 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 CLRN2A0PK11 232 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 RSPH10B2B2RC85 870 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 CPLX1O14810 134 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 RSPH10BP0C881 870 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 ATN1P54259 1190 aaPredicted RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 RIPK4P57078 832 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 AOC3Q16853 763 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 TCERG1LQ5VWI1 586 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 DUSP27Q5VZP5 1158 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 FBXO46Q6PJ61 603 aaPredicted RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 PATL1Q86TB9 770 aaKnown RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 ITPRIPQ8IWB1 547 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 TRMT44Q8IYL2 757 aaKnown RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 SHCBP1Q8NEM2 672 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 TTLL11Q8NHH1 800 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 TBC1D22AQ8WUA7 517 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 DDX21Q9NR30 783 aaKnown RBP eCLIP4.42□□□□□ -1.7
ATM-204ENST00000524792 PES1O00541 588 aaKnown RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 VAMP4O75379 141 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 DDIT3P35638 169 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 RGS3P49796 1198 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 CDC16Q13042 620 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 PTPROQ16827 1216 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 PDZD4Q76G19 769 aaPredicted RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 ZNF444Q8N0Y2 327 aaPredicted RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 TEKT1Q969V4 418 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 SMC6Q96SB8 1091 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 GLIS2Q9BZE0 524 aaPredicted RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 NAT10Q9H0A0 1025 aaKnown RBP4.42□□□□□ -1.7
ATM-204ENST00000524792 ELP3Q9H9T3 547 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 ARHGEF10LQ9HCE6 1279 aa4.42□□□□□ -1.7
ATM-204ENST00000524792 NBPF26B4DH59 902 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 GNAI1P63096 354 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 KIAA0753Q2KHM9 967 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 DNTTIP2Q5QJE6 756 aaKnown RBP4.41□□□□□ -1.7
ATM-204ENST00000524792 LDHAL6AQ6ZMR3 332 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 RNF180Q86T96 592 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 CCDC89Q8N998 374 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 ST13P5Q8NFI4 369 aaPredicted RBP4.41□□□□□ -1.7
ATM-204ENST00000524792 CCDC127Q96BQ5 260 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 RNPC3Q96LT9 517 aaKnown RBP4.41□□□□□ -1.7
ATM-204ENST00000524792 TMEM39AQ9NV64 488 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 DISP1Q96F81 1524 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 PRAMEF22A3QJZ6 481 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 GOLGA8CPA6NN73 597 aa4.41□□□□□ -1.7
ATM-204ENST00000524792 STAMBPO95630 424 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms