RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 NBPF11Q86T75 865 aa8.11□□□□□ -1.11
SREK1-213ENST00000523655 CLEC10AQ8IUN9 316 aa8.11□□□□□ -1.11
SREK1-213ENST00000523655 CSRNP1Q96S65 589 aa8.11□□□□□ -1.11
SREK1-213ENST00000523655 BICRAQ9NZM4 1560 aa8.1□□□□□ -1.11
SREK1-213ENST00000523655 TIAF1O95411 115 aa8.1□□□□□ -1.11
SREK1-213ENST00000523655 MAP4P27816 1152 aaKnown RBP8.1□□□□□ -1.11
SREK1-213ENST00000523655 RXRBP28702 533 aa8.1□□□□□ -1.11
SREK1-213ENST00000523655 RNF43Q68DV7 783 aa8.1□□□□□ -1.11
SREK1-213ENST00000523655 SMG8Q8ND04 991 aaKnown RBP8.1□□□□□ -1.11
SREK1-213ENST00000523655 FBLIM1Q8WUP2 373 aa8.1□□□□□ -1.11
SREK1-213ENST00000523655 FAM83CQ9BQN1 747 aa8.1□□□□□ -1.11
SREK1-213ENST00000523655 ZNF576Q9H609 170 aa8.1□□□□□ -1.11
SREK1-213ENST00000523655 ABCB6Q9NP58 842 aa8.1□□□□□ -1.11
SREK1-213ENST00000523655 NEFLP07196 543 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 FAAP100Q0VG06 881 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 GRM2Q14416 872 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 POU4F3Q15319 338 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 EXOSC6Q5RKV6 272 aaKnown RBP8.09□□□□□ -1.11
SREK1-213ENST00000523655 GLIS3Q8NEA6 775 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 SHKBP1Q8TBC3 707 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 MFSD14AQ96MC6 490 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 CITED4Q96RK1 184 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 RBCK1Q9BYM8 510 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 PCMTD2Q9NV79 361 aa8.09□□□□□ -1.11
SREK1-213ENST00000523655 PRR19A6NJB7 356 aa8.08□□□□□ -1.12
SREK1-213ENST00000523655 ADAMTS4O75173 837 aa8.08□□□□□ -1.12
SREK1-213ENST00000523655 FBXL6Q8N531 539 aa8.08□□□□□ -1.12
SREK1-213ENST00000523655 C2CD4AQ8NCU7 369 aaPredicted RBP8.08□□□□□ -1.12
SREK1-213ENST00000523655 ZC3H12CQ9C0D7 883 aaKnown RBP8.08□□□□□ -1.12
SREK1-213ENST00000523655 CYP4F12Q9HCS2 524 aa8.08□□□□□ -1.12
SREK1-213ENST00000523655 TMEM238LA0A1B0GVL6 79 aa8.07□□□□□ -1.12
SREK1-213ENST00000523655 WDR64B1ANS9 1081 aa8.07□□□□□ -1.12
SREK1-213ENST00000523655 ITPKAP23677 461 aa8.07□□□□□ -1.12
SREK1-213ENST00000523655 SOX4Q06945 474 aaPredicted RBP8.07□□□□□ -1.12
SREK1-213ENST00000523655 NFKBIBQ15653 356 aa8.07□□□□□ -1.12
SREK1-213ENST00000523655 AKAP4Q5JQC9 854 aa8.07□□□□□ -1.12
SREK1-213ENST00000523655 NPM2Q86SE8 214 aaKnown RBP8.07□□□□□ -1.12
SREK1-213ENST00000523655 SETDB2Q96T68 719 aa8.07□□□□□ -1.12
SREK1-213ENST00000523655 DBNDD2Q9BQY9 259 aa8.07□□□□□ -1.12
SREK1-213ENST00000523655 SUGCTQ9HAC7 445 aa8.07□□□□□ -1.12
SREK1-213ENST00000523655 GNEQ9Y223 722 aaKnown RBP8.07□□□□□ -1.12
SREK1-213ENST00000523655 BRD1O95696 1058 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 B3GALT4O96024 378 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 MAPK1P28482 360 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 HOXA10P31260 410 aaPredicted RBP8.06□□□□□ -1.12
SREK1-213ENST00000523655 CD97P48960 835 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 PDE4CQ08493 712 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 DNAJC25Q9H1X3 360 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 DCTN4Q9UJW0 460 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 ACTL7BQ9Y614 415 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 IVNS1ABPQ9Y6Y0 642 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 UNC13AQ9UPW8 1703 aa8.06□□□□□ -1.12
SREK1-213ENST00000523655 NACADO15069 1562 aa8.05□□□□□ -1.12
SREK1-213ENST00000523655 GSC2O15499 205 aa8.05□□□□□ -1.12
SREK1-213ENST00000523655 ADH5P11766 374 aa8.05□□□□□ -1.12
SREK1-213ENST00000523655 USP11P51784 963 aa8.05□□□□□ -1.12
SREK1-213ENST00000523655 FCGRTP55899 365 aa8.05□□□□□ -1.12
SREK1-213ENST00000523655 WDR89Q96FK6 387 aaPredicted RBP8.05□□□□□ -1.12
SREK1-213ENST00000523655 DMRTB1Q96MA1 342 aa8.05□□□□□ -1.12
SREK1-213ENST00000523655 CYP11A1P05108 521 aa8.04□□□□□ -1.12
SREK1-213ENST00000523655 F13BP05160 661 aa8.04□□□□□ -1.12
SREK1-213ENST00000523655 RAB6AP20340 208 aa8.04□□□□□ -1.12
SREK1-213ENST00000523655 ADMP35318 185 aa8.04□□□□□ -1.12
SREK1-213ENST00000523655 DSC3Q14574 896 aa8.04□□□□□ -1.12
SREK1-213ENST00000523655 DYMQ7RTS9 669 aa8.04□□□□□ -1.12
SREK1-213ENST00000523655 SLC51AQ86UW1 340 aa8.04□□□□□ -1.12
SREK1-213ENST00000523655 ALKBH8Q96BT7 664 aaKnown RBP8.04□□□□□ -1.12
SREK1-213ENST00000523655 LGR6Q9HBX8 967 aa8.04□□□□□ -1.12
SREK1-213ENST00000523655 HIF3AQ9Y2N7 669 aa8.04□□□□□ -1.12
SREK1-213ENST00000523655 PNMA6FA0A0J9YX94 578 aa8.03□□□□□ -1.12
SREK1-213ENST00000523655 FAM95CA0A1B0GW59 222 aa8.03□□□□□ -1.12
SREK1-213ENST00000523655 LIG1P18858 919 aa8.03□□□□□ -1.12
SREK1-213ENST00000523655 PRPF40BQ6NWY9 871 aaKnown RBP8.03□□□□□ -1.12
SREK1-213ENST00000523655 STK35Q8TDR2 534 aa8.03□□□□□ -1.12
SREK1-213ENST00000523655 CORO1BQ9BR76 489 aa8.03□□□□□ -1.12
SREK1-213ENST00000523655 KRTAP4-8Q9BYQ9 185 aa8.03□□□□□ -1.12
SREK1-213ENST00000523655 RAD18Q9NS91 495 aa8.03□□□□□ -1.12
SREK1-213ENST00000523655 FAM105AQ9NUU6 356 aa8.03□□□□□ -1.12
SREK1-213ENST00000523655 COBLO75128 1261 aa8.02□□□□□ -1.13
SREK1-213ENST00000523655 NFICP08651 508 aa8.02□□□□□ -1.13
SREK1-213ENST00000523655 PLCB3Q01970 1234 aa8.02□□□□□ -1.13
SREK1-213ENST00000523655 PDE3AQ14432 1141 aa8.02□□□□□ -1.13
SREK1-213ENST00000523655 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.02□□□□□ -1.13
SREK1-213ENST00000523655 NXPE4Q6UWF7 544 aa8.02□□□□□ -1.13
SREK1-213ENST00000523655 BCO2Q9BYV7 579 aa8.02□□□□□ -1.13
SREK1-213ENST00000523655 CCDC86Q9H6F5 360 aaKnown RBP8.02□□□□□ -1.13
SREK1-213ENST00000523655 WWC3Q9ULE0 1092 aa8.02□□□□□ -1.13
SREK1-213ENST00000523655 PPP1R9AQ9ULJ8 1098 aa8.02□□□□□ -1.13
SREK1-213ENST00000523655 AP4E1Q9UPM8 1137 aa8.02□□□□□ -1.13
SREK1-213ENST00000523655 DYNC1LI2O43237 492 aaPredicted RBP8.01□□□□□ -1.13
SREK1-213ENST00000523655 AOC2O75106 756 aa8.01□□□□□ -1.13
SREK1-213ENST00000523655 DTHD1Q6ZMT9 781 aa8.01□□□□□ -1.13
SREK1-213ENST00000523655 PSMG3-AS1Q96PY0 264 aa8.01□□□□□ -1.13
SREK1-213ENST00000523655 WDR18Q9BV38 432 aa8.01□□□□□ -1.13
SREK1-213ENST00000523655 FAM170BA6NMN3 283 aa8□□□□□ -1.13
SREK1-213ENST00000523655 TREHO43280 583 aa8□□□□□ -1.13
SREK1-213ENST00000523655 NLRP2Q9NX02 1062 aa8□□□□□ -1.13
SREK1-213ENST00000523655 AKAP2Q9Y2D5 859 aa8□□□□□ -1.13
SREK1-213ENST00000523655 KIAA1324LA8MWY0 1029 aaPredicted RBP7.99□□□□□ -1.13
SREK1-213ENST00000523655 PDIA4P13667 645 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms