RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 CFAP54Q96N23 3096 aa6.91□□□□□ -1.3
SDC2-206ENST00000521590 VIL1P09327 827 aaKnown RBP6.91□□□□□ -1.3
SDC2-206ENST00000521590 ZBTB48P10074 688 aaPredicted RBP6.91□□□□□ -1.3
SDC2-206ENST00000521590 COPS2P61201 443 aa6.91□□□□□ -1.3
SDC2-206ENST00000521590 ARHGEF6Q15052 776 aa6.91□□□□□ -1.3
SDC2-206ENST00000521590 ZNF790Q6PG37 636 aa6.91□□□□□ -1.3
SDC2-206ENST00000521590 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
SDC2-206ENST00000521590 U2AF1L4Q8WU68 220 aaKnown RBP6.91□□□□□ -1.3
SDC2-206ENST00000521590 WNK4Q96J92 1243 aa6.91□□□□□ -1.3
SDC2-206ENST00000521590 P2RX7Q99572 595 aaKnown RBP6.91□□□□□ -1.3
SDC2-206ENST00000521590 DBNDD1Q9H9R9 158 aa6.91□□□□□ -1.3
SDC2-206ENST00000521590 ZMYND8Q9ULU4 1186 aaPredicted RBP6.91□□□□□ -1.3
SDC2-206ENST00000521590 FZD1Q9UP38 647 aa6.91□□□□□ -1.3
SDC2-206ENST00000521590 USP16Q9Y5T5 823 aa6.91□□□□□ -1.3
SDC2-206ENST00000521590 OTOFQ9HC10 1997 aa6.91□□□□□ -1.3
SDC2-206ENST00000521590 TCF20Q9UGU0 1960 aaKnown RBP6.91□□□□□ -1.3
SDC2-206ENST00000521590 SGPL1O95470 568 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 GJA5P36382 358 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 PRKG1Q13976 671 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 SWT1Q5T5J6 900 aaKnown RBP6.9□□□□□ -1.3
SDC2-206ENST00000521590 ZNF787Q6DD87 383 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 TTC5Q8N0Z6 440 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 TTC13Q8NBP0 860 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 MYLIPQ8WY64 445 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 SLC10A4Q96EP9 437 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 CLMNQ96JQ2 1002 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 LRFN3Q9BTN0 628 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 CARD11Q9BXL7 1154 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 NYXQ9GZU5 481 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 ABCC4O15439 1325 aa6.9□□□□□ -1.3
SDC2-206ENST00000521590 BBOX1O75936 387 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 SYN1P17600 705 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 CTGFP29279 349 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 E2F4Q16254 413 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 WASHC4Q2M389 1173 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 NBPF9Q3BBW0 867 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 OTUD7BQ6GQQ9 843 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 SULT6B1Q6IMI4 303 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 NBPF10Q6P3W6 841 aaKnown RBP6.89□□□□□ -1.31
SDC2-206ENST00000521590 ARMC9Q7Z3E5 817 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 C7orf61Q8IZ16 206 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 USP38Q8NB14 1042 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 NECTIN2Q92692 538 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 EMID1Q96A84 441 aaPredicted RBP6.89□□□□□ -1.31
SDC2-206ENST00000521590 GMLQ99445 158 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 C1QTNF1Q9BXJ1 281 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 UBE2OQ9C0C9 1292 aaKnown RBP6.89□□□□□ -1.31
SDC2-206ENST00000521590 RNF208Q9H0X6 261 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 TMX4Q9H1E5 349 aaPredicted RBP6.89□□□□□ -1.31
SDC2-206ENST00000521590 SEMA6BQ9H3T3 888 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 MYOZ2Q9NPC6 264 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
SDC2-206ENST00000521590 HCN4Q9Y3Q4 1203 aa6.89□□□□□ -1.31
SDC2-206ENST00000521590 IBTKQ9P2D0 1353 aaPredicted RBP6.88□□□□□ -1.31
SDC2-206ENST00000521590 UBN2Q6ZU65 1347 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 ECE2O60344 883 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 GNRH1P01148 92 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 GRK4P32298 578 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 MRE11P49959 708 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 PRMT2P55345 433 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 LACTBP83111 547 aaPredicted RBP6.88□□□□□ -1.31
SDC2-206ENST00000521590 MAP3K11Q16584 847 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 ZNF697Q5TEC3 545 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 SUSD4Q5VX71 490 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 PADI6Q6TGC4 694 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 TRIM67Q6ZTA4 783 aa6.88□□□□□ -1.31
SDC2-206ENST00000521590 PAWRQ96IZ0 340 aaKnown RBP6.88□□□□□ -1.31
SDC2-206ENST00000521590 ANGEL1Q9UNK9 670 aaKnown RBP6.88□□□□□ -1.31
SDC2-206ENST00000521590 ECM29Q5VYK3 1845 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 DDX60LQ5H9U9 1706 aaKnown RBP6.87□□□□□ -1.31
SDC2-206ENST00000521590 C5orf42Q9H799 3197 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 KCNQ3O43525 872 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 NTSR2O95665 410 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 NF2P35240 595 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 AGBL3Q8NEM8 1001 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 ADAMTS19Q8TE59 1207 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 BBXQ8WY36 941 aaPredicted RBP6.87□□□□□ -1.31
SDC2-206ENST00000521590 ZNF775Q96BV0 537 aaPredicted RBP6.87□□□□□ -1.31
SDC2-206ENST00000521590 FMNL2Q96PY5 1086 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 UNC93B1Q9H1C4 597 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 TTYH1Q9H313 450 aaPredicted RBP6.87□□□□□ -1.31
SDC2-206ENST00000521590 POLLQ9UGP5 575 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 RIPOR2Q9Y4F9 1068 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 COL4A1P02462 1669 aa6.87□□□□□ -1.31
SDC2-206ENST00000521590 COL3A1P02461 1466 aaPredicted RBP6.86□□□□□ -1.31
SDC2-206ENST00000521590 MTHFSDQ2M296 383 aaKnown RBP6.86□□□□□ -1.31
SDC2-206ENST00000521590 SLC10A5Q5PT55 438 aa6.86□□□□□ -1.31
SDC2-206ENST00000521590 RSBN1LQ6PCB5 846 aaPredicted RBP6.86□□□□□ -1.31
SDC2-206ENST00000521590 DIS3LQ8TF46 1054 aaKnown RBP6.86□□□□□ -1.31
SDC2-206ENST00000521590 NLRP3Q96P20 1036 aa6.86□□□□□ -1.31
SDC2-206ENST00000521590 SRRDQ9UH36 339 aa6.86□□□□□ -1.31
SDC2-206ENST00000521590 USP17L8P0C7I0 530 aa6.85□□□□□ -1.31
SDC2-206ENST00000521590 FOSL2P15408 326 aa6.85□□□□□ -1.31
SDC2-206ENST00000521590 CAPN2P17655 700 aa6.85□□□□□ -1.31
SDC2-206ENST00000521590 TAF1CQ15572 869 aaPredicted RBP6.85□□□□□ -1.31
SDC2-206ENST00000521590 FAM43AQ8N2R8 423 aa6.85□□□□□ -1.31
SDC2-206ENST00000521590 IL17REQ8NFR9 667 aa6.85□□□□□ -1.31
SDC2-206ENST00000521590 ATXN2LQ8WWM7 1075 aaKnown RBP6.85□□□□□ -1.31
SDC2-206ENST00000521590 BRI3BPQ8WY22 251 aa6.85□□□□□ -1.31
SDC2-206ENST00000521590 TRIM47Q96LD4 638 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms