RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 GTF2IP78347 998 aa6.07□□□□□ -1.44
VPS13B-208ENST00000521037 SEMA3FQ13275 785 aa6.07□□□□□ -1.44
VPS13B-208ENST00000521037 TBCELQ5QJ74 424 aa6.07□□□□□ -1.44
VPS13B-208ENST00000521037 C1orf53Q5VUE5 145 aa6.07□□□□□ -1.44
VPS13B-208ENST00000521037 RAB44Q7Z6P3 723 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-208ENST00000521037 ZNF280CQ8ND82 737 aa6.07□□□□□ -1.44
VPS13B-208ENST00000521037 MTFR1LQ9H019 292 aa6.07□□□□□ -1.44
VPS13B-208ENST00000521037 ALG2Q9H553 416 aa6.07□□□□□ -1.44
VPS13B-208ENST00000521037 RGPD8O14715 1765 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-208ENST00000521037 PARP4Q9UKK3 1724 aaKnown RBP6.06□□□□□ -1.44
VPS13B-208ENST00000521037 SLC15A2Q16348 729 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 SHISA2Q6UWI4 295 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 TXNRD3Q86VQ6 643 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 NOD1Q9Y239 953 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 ATP7BP35670 1465 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 LMO7Q8WWI1 1683 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 BCL9O00512 1426 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 VPS8Q8N3P4 1428 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 ARHGEF10O15013 1369 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 AATKQ6ZMQ8 1374 aa6.06□□□□□ -1.44
VPS13B-208ENST00000521037 SERTM1A2A2V5 107 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 LILRB5O75023 590 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 ABL2P42684 1182 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 HTRA3P83110 453 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 TYRO3Q06418 890 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 EML3Q32P44 896 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 TRAPPC3LQ5T215 181 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 NFATC2IPQ8NCF5 419 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 HSH2DQ96JZ2 352 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 BRD7Q9NPI1 651 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 KCNH4Q9UQ05 1017 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 TNS2Q63HR2 1409 aa6.05□□□□□ -1.44
VPS13B-208ENST00000521037 LRRC37A3O60309 1634 aa6.04□□□□□ -1.44
VPS13B-208ENST00000521037 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
VPS13B-208ENST00000521037 AFF1P51825 1210 aaKnown RBP6.04□□□□□ -1.44
VPS13B-208ENST00000521037 NCOA4Q13772 614 aa6.04□□□□□ -1.44
VPS13B-208ENST00000521037 ZNF827Q17R98 1081 aa6.04□□□□□ -1.44
VPS13B-208ENST00000521037 NBPF11Q86T75 865 aa6.04□□□□□ -1.44
VPS13B-208ENST00000521037 SSH2Q76I76 1423 aa6.04□□□□□ -1.44
VPS13B-208ENST00000521037 KIAA0232Q92628 1395 aa6.04□□□□□ -1.44
VPS13B-208ENST00000521037 ABCC11Q96J66 1382 aa6.04□□□□□ -1.44
VPS13B-208ENST00000521037 WDR90Q96KV7 1748 aa6.03□□□□□ -1.44
VPS13B-208ENST00000521037 SFI1A8K8P3 1242 aa6.03□□□□□ -1.44
VPS13B-208ENST00000521037 SKIP12755 728 aa6.03□□□□□ -1.44
VPS13B-208ENST00000521037 NRG1Q02297 640 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-208ENST00000521037 GPR162Q16538 588 aa6.03□□□□□ -1.44
VPS13B-208ENST00000521037 TXNRD1Q16881 649 aa6.03□□□□□ -1.44
VPS13B-208ENST00000521037 LARP1Q6PKG0 1096 aaKnown RBP6.03□□□□□ -1.44
VPS13B-208ENST00000521037 SUSD3Q96L08 255 aa6.03□□□□□ -1.44
VPS13B-208ENST00000521037 CEP63Q96MT8 703 aa6.03□□□□□ -1.44
VPS13B-208ENST00000521037 ZNF232Q9UNY5 417 aa6.03□□□□□ -1.44
VPS13B-208ENST00000521037 KIAA1024Q9UPX6 916 aa6.03□□□□□ -1.44
VPS13B-208ENST00000521037 KNDC1Q76NI1 1749 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 PRR36Q9H6K5 1346 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 C21orf2O43822 256 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 DKK1O94907 266 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 CHRNA2Q15822 529 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 FMR1NBQ8N0W7 255 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-208ENST00000521037 RHPN1Q8TCX5 695 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 TSPAN10Q9H1Z9 355 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-208ENST00000521037 NEUROD4Q9HD90 331 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 ANKIB1Q9P2G1 1089 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 SLC6A14Q9UN76 642 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 HCN4Q9Y3Q4 1203 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 IFT172Q9UG01 1749 aa6.02□□□□□ -1.45
VPS13B-208ENST00000521037 CLDN10P78369 228 aa6.01□□□□□ -1.45
VPS13B-208ENST00000521037 NEUROD1Q13562 356 aa6.01□□□□□ -1.45
VPS13B-208ENST00000521037 GRIK5Q16478 980 aa6.01□□□□□ -1.45
VPS13B-208ENST00000521037 MARCH10Q8NA82 808 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-208ENST00000521037 TP53INP1Q96A56 240 aa6.01□□□□□ -1.45
VPS13B-208ENST00000521037 GSX2Q9BZM3 304 aa6.01□□□□□ -1.45
VPS13B-208ENST00000521037 PHACTR1Q9C0D0 580 aa6.01□□□□□ -1.45
VPS13B-208ENST00000521037 GOLGA2P5Q9HBQ8 144 aa6.01□□□□□ -1.45
VPS13B-208ENST00000521037 NAGPAQ9UK23 515 aa6.01□□□□□ -1.45
VPS13B-208ENST00000521037 PPLO60437 1756 aa6.01□□□□□ -1.45
VPS13B-208ENST00000521037 OVOS2A0A0G2JMS6 1433 aa6□□□□□ -1.45
VPS13B-208ENST00000521037 OVOS2A0A0J9YW53 1432 aa6□□□□□ -1.45
VPS13B-208ENST00000521037 OVOS2Q6IE36 1432 aa6□□□□□ -1.45
VPS13B-208ENST00000521037 PSMA6P60900 246 aaKnown RBP6□□□□□ -1.45
VPS13B-208ENST00000521037 DEPDC4Q8N2C3 294 aa6□□□□□ -1.45
VPS13B-208ENST00000521037 BHMTQ93088 406 aa6□□□□□ -1.45
VPS13B-208ENST00000521037 EFCC1Q9HA90 598 aa6□□□□□ -1.45
VPS13B-208ENST00000521037 RNF112Q9ULX5 631 aa6□□□□□ -1.45
VPS13B-208ENST00000521037 ADGRF5Q8IZF2 1346 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 ACIN1Q9UKV3 1341 aaKnown RBP5.99□□□□□ -1.45
VPS13B-208ENST00000521037 COL5A2P05997 1499 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-208ENST00000521037 M0R2N6 131 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 GRNP28799 593 aaKnown RBP5.99□□□□□ -1.45
VPS13B-208ENST00000521037 RAC1P63000 192 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 PSME1Q06323 249 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 PDE3BQ13370 1112 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 MCM6Q14566 821 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 BTLAQ7Z6A9 289 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 DMRTC2Q8IXT2 367 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-208ENST00000521037 TCP11L2Q8N4U5 519 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 NUDT8Q8WV74 236 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 JPH1Q9HDC5 661 aaPredicted RBP5.99□□□□□ -1.45
VPS13B-208ENST00000521037 PODXL2Q9NZ53 605 aa5.99□□□□□ -1.45
VPS13B-208ENST00000521037 DMGDHQ9UI17 866 aaKnown RBP5.99□□□□□ -1.45
VPS13B-208ENST00000521037 COG6Q9Y2V7 657 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms