RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 CORO1BQ9BR76 489 aa8.21□□□□□ -1.1
SKP1-207ENST00000520417 TMPRSS13Q9BYE2 586 aa8.21□□□□□ -1.1
SKP1-207ENST00000520417 ZNF576Q9H609 170 aa8.21□□□□□ -1.1
SKP1-207ENST00000520417 PCMTD2Q9NV79 361 aa8.21□□□□□ -1.1
SKP1-207ENST00000520417 IVNS1ABPQ9Y6Y0 642 aa8.21□□□□□ -1.1
SKP1-207ENST00000520417 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
SKP1-207ENST00000520417 MAP4P27816 1152 aaKnown RBP8.2□□□□□ -1.1
SKP1-207ENST00000520417 SMG8Q8ND04 991 aaKnown RBP8.2□□□□□ -1.1
SKP1-207ENST00000520417 FAM83CQ9BQN1 747 aa8.2□□□□□ -1.1
SKP1-207ENST00000520417 TGFB1P01137 390 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 IGHA2P01877 340 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 PLCB3Q01970 1234 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 NFKBIBQ15653 356 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 AKAP4Q5JQC9 854 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 RNF43Q68DV7 783 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 PI16Q6UXB8 463 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 DTHD1Q6ZMT9 781 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 SLC51AQ86UW1 340 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 ALKBH8Q96BT7 664 aaKnown RBP8.19□□□□□ -1.1
SKP1-207ENST00000520417 PPP4R2Q9NY27 417 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 TRAK1Q9UPV9 953 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 HIF3AQ9Y2N7 669 aa8.19□□□□□ -1.1
SKP1-207ENST00000520417 PNMA6FA0A0J9YX94 578 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 ECEL1O95672 775 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 FCGRTP55899 365 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 GRM2Q14416 872 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 FBXL6Q8N531 539 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 FBLIM1Q8WUP2 373 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 MFSD14AQ96MC6 490 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 DBNDD2Q9BQY9 259 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 ABCB6Q9NP58 842 aa8.18□□□□□ -1.1
SKP1-207ENST00000520417 B3GALT4O96024 378 aa8.17□□□□□ -1.1
SKP1-207ENST00000520417 CTSBP07858 339 aa8.17□□□□□ -1.1
SKP1-207ENST00000520417 ITPKAP23677 461 aa8.17□□□□□ -1.1
SKP1-207ENST00000520417 MAPK8P45983 427 aa8.17□□□□□ -1.1
SKP1-207ENST00000520417 SOX4Q06945 474 aaPredicted RBP8.17□□□□□ -1.1
SKP1-207ENST00000520417 HP1BP3Q5SSJ5 553 aaPredicted RBP8.17□□□□□ -1.1
SKP1-207ENST00000520417 DYMQ7RTS9 669 aa8.17□□□□□ -1.1
SKP1-207ENST00000520417 ZC3H12CQ9C0D7 883 aaKnown RBP8.17□□□□□ -1.1
SKP1-207ENST00000520417 SUGCTQ9HAC7 445 aa8.17□□□□□ -1.1
SKP1-207ENST00000520417 ZFYVE1Q9HBF4 777 aa8.17□□□□□ -1.1
SKP1-207ENST00000520417 GPN3Q9UHW5 284 aaPredicted RBP8.17□□□□□ -1.1
SKP1-207ENST00000520417 AP4E1Q9UPM8 1137 aa8.17□□□□□ -1.1
SKP1-207ENST00000520417 FAM95CA0A1B0GW59 222 aa8.16□□□□□ -1.1
SKP1-207ENST00000520417 WDR64B1ANS9 1081 aa8.16□□□□□ -1.1
SKP1-207ENST00000520417 TIAF1O95411 115 aa8.16□□□□□ -1.1
SKP1-207ENST00000520417 RAB6AP20340 208 aa8.16□□□□□ -1.1
SKP1-207ENST00000520417 SHKBP1Q8TBC3 707 aa8.16□□□□□ -1.1
SKP1-207ENST00000520417 COBLO75128 1261 aa8.15□□□□□ -1.1
SKP1-207ENST00000520417 ADH5P11766 374 aa8.15□□□□□ -1.1
SKP1-207ENST00000520417 CDPF1Q6NVV7 123 aa8.15□□□□□ -1.1
SKP1-207ENST00000520417 PRPF40BQ6NWY9 871 aaKnown RBP8.15□□□□□ -1.1
SKP1-207ENST00000520417 PAOXQ6QHF9 649 aa8.15□□□□□ -1.1
SKP1-207ENST00000520417 ZDHHC13Q8IUH4 622 aa8.15□□□□□ -1.1
SKP1-207ENST00000520417 TRIM56Q9BRZ2 755 aaKnown RBP8.15□□□□□ -1.1
SKP1-207ENST00000520417 YIPF2Q9BWQ6 316 aa8.15□□□□□ -1.1
SKP1-207ENST00000520417 BCO2Q9BYV7 579 aa8.15□□□□□ -1.1
SKP1-207ENST00000520417 NRSN2Q9GZP1 204 aa8.15□□□□□ -1.1
SKP1-207ENST00000520417 AKAP2Q9Y2D5 859 aa8.15□□□□□ -1.1
SKP1-207ENST00000520417 GRIK1P39086 918 aa8.14□□□□□ -1.11
SKP1-207ENST00000520417 KCNA1Q09470 495 aa8.14□□□□□ -1.11
SKP1-207ENST00000520417 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.14□□□□□ -1.11
SKP1-207ENST00000520417 ZSCAN29Q8IWY8 852 aaPredicted RBP8.14□□□□□ -1.11
SKP1-207ENST00000520417 C2CD4AQ8NCU7 369 aaPredicted RBP8.14□□□□□ -1.11
SKP1-207ENST00000520417 GIMAP7Q8NHV1 300 aa8.14□□□□□ -1.11
SKP1-207ENST00000520417 ATG3Q9NT62 314 aa8.14□□□□□ -1.11
SKP1-207ENST00000520417 PTPN12Q05209 780 aaKnown RBP8.13□□□□□ -1.11
SKP1-207ENST00000520417 FAAP100Q0VG06 881 aa8.13□□□□□ -1.11
SKP1-207ENST00000520417 AP3B2Q13367 1082 aa8.13□□□□□ -1.11
SKP1-207ENST00000520417 NXPE4Q6UWF7 544 aa8.13□□□□□ -1.11
SKP1-207ENST00000520417 GLIS3Q8NEA6 775 aa8.13□□□□□ -1.11
SKP1-207ENST00000520417 ACTL7BQ9Y614 415 aa8.13□□□□□ -1.11
SKP1-207ENST00000520417 TREHO43280 583 aa8.12□□□□□ -1.11
SKP1-207ENST00000520417 LIG1P18858 919 aa8.12□□□□□ -1.11
SKP1-207ENST00000520417 ASPAP45381 313 aa8.12□□□□□ -1.11
SKP1-207ENST00000520417 DSC3Q14574 896 aa8.12□□□□□ -1.11
SKP1-207ENST00000520417 TBC1D32Q96NH3 1257 aa8.12□□□□□ -1.11
SKP1-207ENST00000520417 OSBPL1AQ9BXW6 950 aa8.12□□□□□ -1.11
SKP1-207ENST00000520417 LGR6Q9HBX8 967 aa8.12□□□□□ -1.11
SKP1-207ENST00000520417 MED26O95402 600 aa8.11□□□□□ -1.11
SKP1-207ENST00000520417 NFICP08651 508 aa8.11□□□□□ -1.11
SKP1-207ENST00000520417 CD97P48960 835 aa8.11□□□□□ -1.11
SKP1-207ENST00000520417 PPP2R3AQ06190 1150 aa8.11□□□□□ -1.11
SKP1-207ENST00000520417 ENOX2Q16206 610 aaKnown RBP8.11□□□□□ -1.11
SKP1-207ENST00000520417 RPS26P11Q5JNZ5 115 aaPredicted RBP8.11□□□□□ -1.11
SKP1-207ENST00000520417 AOC2O75106 756 aa8.1□□□□□ -1.11
SKP1-207ENST00000520417 KCNB2Q92953 911 aa8.1□□□□□ -1.11
SKP1-207ENST00000520417 FAM105AQ9NUU6 356 aa8.1□□□□□ -1.11
SKP1-207ENST00000520417 TMEM39AQ9NV64 488 aa8.1□□□□□ -1.11
SKP1-207ENST00000520417 LEMD3Q9Y2U8 911 aa8.1□□□□□ -1.11
SKP1-207ENST00000520417 PRR19A6NJB7 356 aa8.09□□□□□ -1.11
SKP1-207ENST00000520417 F13BP05160 661 aa8.09□□□□□ -1.11
SKP1-207ENST00000520417 INTS5Q6P9B9 1019 aaKnown RBP8.09□□□□□ -1.11
SKP1-207ENST00000520417 AEBP1Q8IUX7 1158 aa8.09□□□□□ -1.11
SKP1-207ENST00000520417 SETDB2Q96T68 719 aa8.09□□□□□ -1.11
SKP1-207ENST00000520417 WDR18Q9BV38 432 aa8.09□□□□□ -1.11
SKP1-207ENST00000520417 CCDC86Q9H6F5 360 aaKnown RBP8.09□□□□□ -1.11
SKP1-207ENST00000520417 DAGLAQ9Y4D2 1042 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms