RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 SYNE3Q6ZMZ3 975 aa14.29□□□□□ -0.12
PCM1-203ENST00000517545 KLF18A0A0U1RQI7 1052 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 CMA1P23946 247 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 OAS2P29728 719 aaKnown RBP14.28□□□□□ -0.12
PCM1-203ENST00000517545 TMEM139Q8IV31 216 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 AIFM3Q96NN9 605 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 HPS5Q9UPZ3 1129 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 GOLGA8BA8MQT2 603 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 GYS2P54840 703 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 RAD51AP2Q09MP3 1159 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 CC2D1AQ6P1N0 951 aaPredicted RBP14.28□□□□□ -0.12
PCM1-203ENST00000517545 VSTM4Q8IW00 320 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 UBXN6Q9BZV1 441 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 INTS13Q9NVM9 706 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 FANCLQ9NW38 375 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 PPP2R2CQ9Y2T4 447 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 CCP110O43303 1012 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 TOP1P11387 765 aaKnown RBP14.28□□□□□ -0.12
PCM1-203ENST00000517545 MYL5Q02045 173 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 KIF23Q02241 960 aaPredicted RBP14.28□□□□□ -0.12
PCM1-203ENST00000517545 PSME1Q06323 249 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 CCDC158Q5M9N0 1113 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 TEX35Q5T0J7 233 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 ANKRD24Q8TF21 1146 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 ZBTB9Q96C00 473 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
PCM1-203ENST00000517545 SYKP43405 635 aa14.27□□□□□ -0.12
PCM1-203ENST00000517545 GNL2Q13823 731 aaKnown RBP14.27□□□□□ -0.12
PCM1-203ENST00000517545 THEMISQ8N1K5 641 aaPredicted RBP14.27□□□□□ -0.12
PCM1-203ENST00000517545 OSBP2Q969R2 916 aa14.27□□□□□ -0.12
PCM1-203ENST00000517545 ZNF496Q96IT1 587 aaPredicted RBP14.27□□□□□ -0.12
PCM1-203ENST00000517545 SRRTQ9BXP5 876 aaKnown RBP14.27□□□□□ -0.12
PCM1-203ENST00000517545 GNG11P61952 73 aa14.27□□□□□ -0.13
PCM1-203ENST00000517545 LRP10Q7Z4F1 713 aa14.27□□□□□ -0.13
PCM1-203ENST00000517545 NFATC2IPQ8NCF5 419 aa14.27□□□□□ -0.13
PCM1-203ENST00000517545 SHC4Q6S5L8 630 aa14.27□□□□□ -0.13
PCM1-203ENST00000517545 ATG9AQ7Z3C6 839 aa14.27□□□□□ -0.13
PCM1-203ENST00000517545 BRAPQ7Z569 592 aa14.27□□□□□ -0.13
PCM1-203ENST00000517545 CLIC6Q96NY7 704 aa14.27□□□□□ -0.13
PCM1-203ENST00000517545 TUBE1Q9UJT0 475 aa14.27□□□□□ -0.13
PCM1-203ENST00000517545 AXIN2Q9Y2T1 843 aa14.27□□□□□ -0.13
PCM1-203ENST00000517545 FOXP2O15409 715 aa14.26□□□□□ -0.13
PCM1-203ENST00000517545 PRC1O43663 620 aa14.26□□□□□ -0.13
PCM1-203ENST00000517545 DHX8Q14562 1220 aaKnown RBP14.26□□□□□ -0.13
PCM1-203ENST00000517545 SMC1AQ14683 1233 aaKnown RBP14.26□□□□□ -0.13
PCM1-203ENST00000517545 HSP90AB3PQ58FF7 597 aa14.26□□□□□ -0.13
PCM1-203ENST00000517545 CPLX1O14810 134 aa14.26□□□□□ -0.13
PCM1-203ENST00000517545 RNF113AO15541 343 aaKnown RBP14.26□□□□□ -0.13
PCM1-203ENST00000517545 CDC27P30260 824 aa14.26□□□□□ -0.13
PCM1-203ENST00000517545 KRBA2Q6ZNG9 492 aa14.26□□□□□ -0.13
PCM1-203ENST00000517545 TOGARAM2Q6ZUX3 1019 aa14.26□□□□□ -0.13
PCM1-203ENST00000517545 FOXP4Q8IVH2 680 aaPredicted RBP14.26□□□□□ -0.13
PCM1-203ENST00000517545 KCNH5Q8NCM2 988 aa14.26□□□□□ -0.13
PCM1-203ENST00000517545 PDE4BQ07343 736 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 SLC39A14Q15043 492 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 CBFA2T2O43439 604 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 GCP02774 474 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 CASQ1P31415 396 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 CASP7P55210 303 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 PPP2R3AQ06190 1150 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 PDILTQ8N807 584 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 PARD6BQ9BYG5 372 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 FEZ2Q9UHY8 353 aaPredicted RBP14.25□□□□□ -0.13
PCM1-203ENST00000517545 OVOS2A0A0G2JMS6 1433 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 ZSCAN12O43309 604 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 IFIT1P09914 478 aaKnown RBP14.25□□□□□ -0.13
PCM1-203ENST00000517545 ADKP55263 362 aaKnown RBP14.25□□□□□ -0.13
PCM1-203ENST00000517545 ANTXR2P58335 489 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 MAP3K9P80192 1104 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 LRRC24Q50LG9 513 aa14.25□□□□□ -0.13
PCM1-203ENST00000517545 ZNF594Q96JF6 807 aaPredicted RBP14.25□□□□□ -0.13
PCM1-203ENST00000517545 FOXN1O15353 648 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 ARHGAP6O43182 974 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 BMP6P22004 513 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 ESCO1Q5FWF5 840 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 METTL16Q86W50 562 aaKnown RBP14.24□□□□□ -0.13
PCM1-203ENST00000517545 DESI2Q9BSY9 194 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 ZSWIM4Q9H7M6 989 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 DENND2AQ9ULE3 1009 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 MRFAP1Q9Y605 127 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 FKBP4Q02790 459 aaKnown RBP eCLIP14.24□□□□□ -0.13
PCM1-203ENST00000517545 LMOD2Q6P5Q4 547 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 BAG1Q99933 345 aaPredicted RBP14.24□□□□□ -0.13
PCM1-203ENST00000517545 TRIM34Q9BYJ4 488 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 TPM1P09493 284 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 RXRAP19793 462 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 LONRF3Q496Y0 759 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 RSRC2Q7L4I2 434 aaKnown RBP14.24□□□□□ -0.13
PCM1-203ENST00000517545 TXLNBQ8N3L3 684 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 NKX2-3Q8TAU0 364 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 KIFC2Q96AC6 838 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 MPHOSPH8Q99549 860 aa14.24□□□□□ -0.13
PCM1-203ENST00000517545 IRX2Q9BZI1 471 aaPredicted RBP14.24□□□□□ -0.13
PCM1-203ENST00000517545 C5P01031 1676 aa14.23□□□□□ -0.13
PCM1-203ENST00000517545 ADAMTSL3P82987 1691 aa14.23□□□□□ -0.13
PCM1-203ENST00000517545 FGAP02671 866 aa14.23□□□□□ -0.13
PCM1-203ENST00000517545 FOXO4P98177 505 aa14.23□□□□□ -0.13
PCM1-203ENST00000517545 KARSQ15046 597 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms