RNA–Protein interactions for RNA: ENST00000516879.1

RNU6-579P-201, Transcript of RNA, U6 small nuclear 579, pseudogene, humanhuman

BASIC

Gene RNU6-579P, Length 102 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-579P-201ENST00000516879 ZNF274Q96GC6 653 aaPredicted RBP4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 TMEM87BQ96K49 555 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 NEK1Q96PY6 1258 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 STRBPQ96SI9 672 aaKnown RBP4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 SGIP1Q9BQI5 828 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 RIOK1Q9BRS2 568 aaKnown RBP4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 LLPHQ9BRT6 129 aaKnown RBP4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 IL25Q9H293 177 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 RNF41Q9H4P4 317 aaPredicted RBP4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 CD209Q9NNX6 404 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 CHMP5Q9NZZ3 219 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 ANKIB1Q9P2G1 1089 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 LIMCH1Q9UPQ0 1083 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 KIF3AQ9Y496 699 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 TIAM2Q8IVF5 1701 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 COL2A1P02458 1487 aaPredicted RBP4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 CACNA1SQ13698 1873 aa4.28□□□□□ -1.72
RNU6-579P-201ENST00000516879 ROBO3Q96MS0 1386 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 ZNF532Q9HCE3 1301 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 COL4A1P02462 1669 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 COL1A1P02452 1464 aaPredicted RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 FAM177BA6PVY3 158 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 FOXP2O15409 715 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 ORC4O43929 436 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 DHX16O60231 1041 aaKnown RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 IDH1O75874 414 aaKnown RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 FGAP02671 866 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 CYP21A2P08686 494 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 PDCP20941 246 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 RPS6KB1P23443 525 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 POLD1P28340 1107 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 LIFRP42702 1097 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 NEK4P51957 841 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 GPSM2P81274 684 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 EXOSC10Q01780 885 aaKnown RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 KIAA2012Q0VF49 1180 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 PPP4R3BQ5MIZ7 849 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 FKBP1CQ5VVH2 108 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 NAA16Q6N069 864 aaPredicted RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 TEX2Q8IWB9 1127 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 RASEFQ8IZ41 740 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 TTLL6Q8N841 843 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 HELBQ8NG08 1087 aaPredicted RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 STAG1Q8WVM7 1258 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 TMX3Q96JJ7 454 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 CCDC85AQ96PX6 553 aaPredicted RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 MAP3K14Q99558 947 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 CRNKL1Q9BZJ0 848 aaKnown RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 KRT23Q9C075 422 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 ZC3H12CQ9C0D7 883 aaKnown RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 PUS7LQ9H0K6 701 aaKnown RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 ZNF287Q9HBT7 754 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 PIH1D3Q9NQM4 214 aaKnown RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 LRP2BPQ9P2M1 347 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 ARPP21Q9UBL0 812 aaPredicted RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 MKRN1Q9UHC7 482 aaKnown RBP4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 PALD1Q9ULE6 856 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 LAMA4Q16363 1823 aa4.27□□□□□ -1.73
RNU6-579P-201ENST00000516879 COL11A2P13942 1736 aaPredicted RBP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 CCDC88AQ3V6T2 1871 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 MROH7-TTC4A0A0A0MT08 1334 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 GPR75-ASB3A0A0A6YYF3 556 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 GSG1L2A8MUP6 293 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 E7EWF7 191 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 ZNF213O14771 459 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 UFL1O94874 794 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 LDHBP07195 334 aaKnown RBP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 SLC3A2P08195 630 aaKnown RBP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 MCM5P33992 734 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 GYG1P46976 350 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 HMGN5P82970 282 aaKnown RBP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 TRDNQ13061 729 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 CCDC93Q567U6 631 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 PRPF40BQ6NWY9 871 aaKnown RBP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 DPP8Q6V1X1 898 aaPredicted RBP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 C2CD5Q86YS7 1000 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 MB21D2Q8IYB1 491 aaPredicted RBP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 IFNL3Q8IZI9 196 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 MAGEB6Q8N7X4 407 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 MTMR14Q8NCE2 650 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 NCOA7Q8NI08 942 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 ANKS1AQ92625 1134 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 UPF1Q92900 1129 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 EDC3Q96F86 508 aaKnown RBP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 ANP32EQ9BTT0 268 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 TCP11L1Q9NUJ3 509 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 POLLQ9UGP5 575 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 WWC3Q9ULE0 1092 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 SYNPO2Q9UMS6 1093 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 NSFL1CQ9UNZ2 370 aaKnown RBP4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 MYH13Q9UKX3 1938 aa4.26□□□□□ -1.73
RNU6-579P-201ENST00000516879 PSME4Q14997 1843 aa4.25□□□□□ -1.73
RNU6-579P-201ENST00000516879 MAGEB6P1A0A0J9YX57 407 aa4.25□□□□□ -1.73
RNU6-579P-201ENST00000516879 M0R2C6 588 aa4.25□□□□□ -1.73
RNU6-579P-201ENST00000516879 MSH5O43196 834 aa4.25□□□□□ -1.73
RNU6-579P-201ENST00000516879 PFKFB2O60825 505 aa4.25□□□□□ -1.73
RNU6-579P-201ENST00000516879 FRAT2O75474 233 aaPredicted RBP4.25□□□□□ -1.73
RNU6-579P-201ENST00000516879 MBD4O95243 580 aa4.25□□□□□ -1.73
RNU6-579P-201ENST00000516879 CASTP20810 708 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms