RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 USP31Q70CQ4 1352 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 PARP4Q9UKK3 1724 aaKnown RBP10.42□□□□□ -0.74
SFXN1-211ENST00000515736 EML1O00423 815 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 SORBS3O60504 671 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 CD2BP2O95400 341 aaKnown RBP10.42□□□□□ -0.74
SFXN1-211ENST00000515736 TMPOP42166 694 aaKnown RBP10.42□□□□□ -0.74
SFXN1-211ENST00000515736 HIRAP54198 1017 aaPredicted RBP10.42□□□□□ -0.74
SFXN1-211ENST00000515736 ATP2B2Q01814 1243 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 RAD51AP2Q09MP3 1159 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 LMOD3Q0VAK6 560 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 TLR1Q15399 786 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 METTL16Q86W50 562 aaKnown RBP10.42□□□□□ -0.74
SFXN1-211ENST00000515736 GJD3Q8N144 294 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 UBXN4Q92575 508 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 CAMKK2Q96RR4 588 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 ESYT1Q9BSJ8 1104 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 PGPEP1Q9NXJ5 209 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 POLKQ9UBT6 870 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 POLIQ9UNA4 740 aa10.42□□□□□ -0.74
SFXN1-211ENST00000515736 CPDO75976 1380 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 KDM2BQ8NHM5 1336 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 SENP3-EIF4A1A0A087X0R7 540 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 SERTM1A2A2V5 107 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 ITGBL1O95965 494 aaPredicted RBP10.41□□□□□ -0.74
SFXN1-211ENST00000515736 NR3C2P08235 984 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 TEAD4Q15561 434 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 ENOX2Q16206 610 aaKnown RBP10.41□□□□□ -0.74
SFXN1-211ENST00000515736 PIK3R5Q8WYR1 880 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 SETDB2Q96T68 719 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 NIF3L1Q9GZT8 377 aa10.41□□□□□ -0.74
SFXN1-211ENST00000515736 USP19O94966 1318 aa10.4□□□□□ -0.74
SFXN1-211ENST00000515736 TTC21BQ7Z4L5 1316 aa10.4□□□□□ -0.74
SFXN1-211ENST00000515736 U2SURPO15042 1029 aaKnown RBP10.4□□□□□ -0.74
SFXN1-211ENST00000515736 MZF1P28698 734 aaPredicted RBP10.4□□□□□ -0.74
SFXN1-211ENST00000515736 RARSP54136 660 aaKnown RBP10.4□□□□□ -0.74
SFXN1-211ENST00000515736 PSMD2Q13200 908 aa10.4□□□□□ -0.74
SFXN1-211ENST00000515736 ETFBKMTQ8IXQ9 262 aa10.4□□□□□ -0.74
SFXN1-211ENST00000515736 FAM177A1Q8N128 213 aaPredicted RBP10.4□□□□□ -0.74
SFXN1-211ENST00000515736 NBPF15Q8N660 670 aa10.4□□□□□ -0.74
SFXN1-211ENST00000515736 ZDHHC1Q8WTX9 485 aa10.4□□□□□ -0.74
SFXN1-211ENST00000515736 METTL5Q9NRN9 209 aaKnown RBP10.4□□□□□ -0.74
SFXN1-211ENST00000515736 EMILIN1Q9Y6C2 1016 aa10.4□□□□□ -0.74
SFXN1-211ENST00000515736 COL5A2P05997 1499 aaPredicted RBP10.4□□□□□ -0.74
SFXN1-211ENST00000515736 SBF2Q86WG5 1849 aa10.4□□□□□ -0.75
SFXN1-211ENST00000515736 WNK3Q9BYP7 1800 aa10.4□□□□□ -0.75
SFXN1-211ENST00000515736 RGPD5Q99666 1765 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 PIK3C2AO00443 1686 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 PLIN1O60240 522 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 GCP02774 474 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 CANXP27824 592 aaKnown RBP10.39□□□□□ -0.75
SFXN1-211ENST00000515736 NOS2P35228 1153 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 USP5P45974 858 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 C11orf91Q3C1V1 193 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 SH3PXD2AQ5TCZ1 1133 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 NT5DC4Q86YG4 428 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 LRRC37A3O60309 1634 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 CRB1P82279 1406 aa10.39□□□□□ -0.75
SFXN1-211ENST00000515736 PNMA6FA0A0J9YX94 578 aa10.38□□□□□ -0.75
SFXN1-211ENST00000515736 RTN1Q16799 776 aa10.38□□□□□ -0.75
SFXN1-211ENST00000515736 ALG1LQ6GMV1 187 aa10.38□□□□□ -0.75
SFXN1-211ENST00000515736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.38□□□□□ -0.75
SFXN1-211ENST00000515736 ALDH16A1Q8IZ83 802 aa10.38□□□□□ -0.75
SFXN1-211ENST00000515736 ZNF295-AS1Q8N0V1 137 aa10.38□□□□□ -0.75
SFXN1-211ENST00000515736 EDEM1Q92611 657 aa10.38□□□□□ -0.75
SFXN1-211ENST00000515736 PPP1R1BQ9UD71 204 aaPredicted RBP10.38□□□□□ -0.75
SFXN1-211ENST00000515736 VTI1BQ9UEU0 232 aa10.38□□□□□ -0.75
SFXN1-211ENST00000515736 THRAP3Q9Y2W1 955 aaKnown RBP10.38□□□□□ -0.75
SFXN1-211ENST00000515736 KIF16BQ96L93 1317 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 OVOS2A0A0G2JMS6 1433 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 PDGFAP04085 211 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 ADH1AP07327 375 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 IL13P35225 146 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 FANCCQ00597 558 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 DNM1Q05193 864 aaKnown RBP10.37□□□□□ -0.75
SFXN1-211ENST00000515736 CLN3Q13286 438 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 DGKZQ13574 1117 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 NFE2L2Q16236 605 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 PPP1R18Q6NYC8 613 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 TOM1L2Q6ZVM7 507 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 KDF1Q8NAX2 398 aaPredicted RBP10.37□□□□□ -0.75
SFXN1-211ENST00000515736 FHDC1Q9C0D6 1143 aaPredicted RBP10.37□□□□□ -0.75
SFXN1-211ENST00000515736 CHMP4BQ9H444 224 aaKnown RBP10.37□□□□□ -0.75
SFXN1-211ENST00000515736 PEAK1Q9H792 1746 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.37□□□□□ -0.75
SFXN1-211ENST00000515736 HCN4Q9Y3Q4 1203 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 CACNA1FO60840 1977 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 SLIT3O75094 1523 aa10.37□□□□□ -0.75
SFXN1-211ENST00000515736 ZAP70P43403 619 aa10.36□□□□□ -0.75
SFXN1-211ENST00000515736 RIPK4P57078 832 aa10.36□□□□□ -0.75
SFXN1-211ENST00000515736 DDB1Q16531 1140 aa10.36□□□□□ -0.75
SFXN1-211ENST00000515736 NME9Q86XW9 330 aa10.36□□□□□ -0.75
SFXN1-211ENST00000515736 RNF34Q969K3 372 aa10.36□□□□□ -0.75
SFXN1-211ENST00000515736 ZNF232Q9UNY5 417 aa10.36□□□□□ -0.75
SFXN1-211ENST00000515736 RGPD3A6NKT7 1758 aaPredicted RBP10.36□□□□□ -0.75
SFXN1-211ENST00000515736 RGPD4Q7Z3J3 1758 aa10.36□□□□□ -0.75
SFXN1-211ENST00000515736 COL18A1P39060 1754 aa10.35□□□□□ -0.75
SFXN1-211ENST00000515736 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
SFXN1-211ENST00000515736 BCAR3O75815 825 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms