RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CHD7Q9P2D1 2997 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 PSME4Q14997 1843 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 OTOFQ9HC10 1997 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 F8W031 263 aaPredicted RBP4.32□□□□□ -1.72
CHD1-211ENST00000514344 ADCY3O60266 1144 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 VGLL4Q14135 290 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 PROSER3Q2NL68 480 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 SEMA6BQ9H3T3 888 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 METRNQ9UJH8 293 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 KNSTRNQ9Y448 316 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 DCHS1Q96JQ0 3298 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 C7P10643 843 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 DLGAP5Q15398 846 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.32□□□□□ -1.72
CHD1-211ENST00000514344 ADAMTS19Q8TE59 1207 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 SLC39A7Q92504 469 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 NECAB3Q96P71 396 aaPredicted RBP4.32□□□□□ -1.72
CHD1-211ENST00000514344 UHRF1Q96T88 793 aaPredicted RBP4.32□□□□□ -1.72
CHD1-211ENST00000514344 NBPF3Q9H094 633 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 TTYH1Q9H313 450 aaPredicted RBP4.32□□□□□ -1.72
CHD1-211ENST00000514344 PODXL2Q9NZ53 605 aa4.32□□□□□ -1.72
CHD1-211ENST00000514344 SYNGAP1Q96PV0 1343 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 ATP5J2-PTCD1G3V325 749 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 FLT3LGP49771 235 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 RASA3Q14644 834 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 TAF7Q15545 349 aaPredicted RBP4.31□□□□□ -1.72
CHD1-211ENST00000514344 TTLL5Q6EMB2 1281 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 C17orf99Q6UX52 265 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 SLAIN1Q8ND83 568 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 AOX1Q06278 1338 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 IRF6O14896 467 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 MYO1BO43795 1136 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 KCNA4P22459 653 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 RBM5P52756 815 aaKnown RBP eCLIP4.31□□□□□ -1.72
CHD1-211ENST00000514344 COPS6Q7L5N1 327 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 HELBQ8NG08 1087 aaPredicted RBP4.31□□□□□ -1.72
CHD1-211ENST00000514344 PAK6Q9NQU5 681 aaPredicted RBP4.31□□□□□ -1.72
CHD1-211ENST00000514344 CSADQ9Y600 493 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 ZFHX4Q86UP3 3567 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 TRIOO75962 3097 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 MYO3BQ8WXR4 1341 aa4.31□□□□□ -1.72
CHD1-211ENST00000514344 TCF20Q9UGU0 1960 aaKnown RBP4.31□□□□□ -1.72
CHD1-211ENST00000514344 CHD9Q3L8U1 2897 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 CETPP11597 493 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 GTF2IP78347 998 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 SF3B3Q15393 1217 aaKnown RBP4.3□□□□□ -1.72
CHD1-211ENST00000514344 CC2D1BQ5T0F9 858 aaKnown RBP4.3□□□□□ -1.72
CHD1-211ENST00000514344 STRIP1Q5VSL9 837 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 TXNRD3Q86VQ6 643 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 PRMT6Q96LA8 375 aaPredicted RBP4.3□□□□□ -1.72
CHD1-211ENST00000514344 XDHP47989 1333 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 UNCXA6NJT0 531 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 FCGRTP55899 365 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 EIF4A1P60842 406 aaKnown RBP4.3□□□□□ -1.72
CHD1-211ENST00000514344 HSP90AB3PQ58FF7 597 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.3□□□□□ -1.72
CHD1-211ENST00000514344 IL27Q8NEV9 243 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 XAGE3Q8WTP9 111 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 ZKSCAN4Q969J2 545 aaPredicted RBP4.3□□□□□ -1.72
CHD1-211ENST00000514344 LBHD1Q9BQE6 289 aaPredicted RBP4.3□□□□□ -1.72
CHD1-211ENST00000514344 C1QTNF1Q9BXJ1 281 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 CRISPLD2Q9H0B8 497 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 C11orf49Q9H6J7 331 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 JAG2Q9Y219 1238 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 COL1A1P02452 1464 aaPredicted RBP4.3□□□□□ -1.72
CHD1-211ENST00000514344 ADGRA2Q96PE1 1338 aa4.3□□□□□ -1.72
CHD1-211ENST00000514344 PDHXO00330 501 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 IRS4O14654 1257 aaPredicted RBP4.29□□□□□ -1.72
CHD1-211ENST00000514344 CYP2C8P10632 490 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 PDIA6Q15084 440 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 LRP10Q7Z4F1 713 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 ZBED3Q96IU2 234 aaPredicted RBP4.29□□□□□ -1.72
CHD1-211ENST00000514344 LRFN3Q9BTN0 628 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHD1-211ENST00000514344 PPP2R3BQ9Y5P8 575 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 PFASO15067 1338 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 FAM205AQ6ZU69 1335 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 VPS13AQ96RL7 3174 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 MRE11P49959 708 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 SNAPC2Q13487 334 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 CFAP100Q494V2 611 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 ZBTB38Q8NAP3 1195 aaPredicted RBP4.29□□□□□ -1.72
CHD1-211ENST00000514344 JARID2Q92833 1246 aaPredicted RBP4.29□□□□□ -1.72
CHD1-211ENST00000514344 ASB2Q96Q27 587 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 TMEM39BQ9GZU3 492 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 DDX60LQ5H9U9 1706 aaKnown RBP4.29□□□□□ -1.72
CHD1-211ENST00000514344 ZNF804BA4D1E1 1349 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 ZDBF2Q9HCK1 2354 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 DOCK3Q8IZD9 2030 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 COL2A1P02458 1487 aaPredicted RBP4.29□□□□□ -1.72
CHD1-211ENST00000514344 SPDYE5A6NIY4 337 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 TCP10L2B9ZVM9 353 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 TNPO2O14787 897 aaKnown RBP4.29□□□□□ -1.72
CHD1-211ENST00000514344 KLRK1P26718 216 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 MAP3K9P80192 1104 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 GRIN2CQ14957 1233 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 SHHQ15465 462 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 CCDC85BQ15834 202 aaPredicted RBP4.29□□□□□ -1.72
CHD1-211ENST00000514344 LRRC26Q2I0M4 334 aa4.29□□□□□ -1.72
CHD1-211ENST00000514344 C9orf50Q5SZB4 431 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms