RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 ALKBH8Q96BT7 664 aaKnown RBP6.04□□□□□ -1.44
PROM1-216ENST00000513946 DBNDD2Q9BQY9 259 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 TRIM56Q9BRZ2 755 aaKnown RBP6.04□□□□□ -1.44
PROM1-216ENST00000513946 USP26Q9BXU7 913 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 ZNF576Q9H609 170 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 NPHS2Q9NP85 383 aa6.04□□□□□ -1.44
PROM1-216ENST00000513946 ADAMTS4O75173 837 aa6.03□□□□□ -1.44
PROM1-216ENST00000513946 MAP4P27816 1152 aaKnown RBP6.03□□□□□ -1.44
PROM1-216ENST00000513946 PTPN12Q05209 780 aaKnown RBP6.03□□□□□ -1.44
PROM1-216ENST00000513946 SOX4Q06945 474 aaPredicted RBP6.03□□□□□ -1.44
PROM1-216ENST00000513946 FDX2Q6P4F2 183 aa6.03□□□□□ -1.44
PROM1-216ENST00000513946 C2CD4AQ8NCU7 369 aaPredicted RBP6.03□□□□□ -1.44
PROM1-216ENST00000513946 CSRNP1Q96S65 589 aa6.03□□□□□ -1.44
PROM1-216ENST00000513946 CYP4F12Q9HCS2 524 aa6.03□□□□□ -1.44
PROM1-216ENST00000513946 ABCB6Q9NP58 842 aa6.03□□□□□ -1.44
PROM1-216ENST00000513946 COBLO75128 1261 aa6.02□□□□□ -1.45
PROM1-216ENST00000513946 ECEL1O95672 775 aa6.02□□□□□ -1.45
PROM1-216ENST00000513946 B3GALT4O96024 378 aa6.02□□□□□ -1.45
PROM1-216ENST00000513946 MAOBP27338 520 aa6.02□□□□□ -1.45
PROM1-216ENST00000513946 PRPF40BQ6NWY9 871 aaKnown RBP6.02□□□□□ -1.45
PROM1-216ENST00000513946 SHKBP1Q8TBC3 707 aa6.02□□□□□ -1.45
PROM1-216ENST00000513946 EZH1Q92800 747 aaPredicted RBP6.02□□□□□ -1.45
PROM1-216ENST00000513946 KCNF1Q9H3M0 494 aa6.02□□□□□ -1.45
PROM1-216ENST00000513946 TMEM238LA0A1B0GVL6 79 aa6.01□□□□□ -1.45
PROM1-216ENST00000513946 EIF4EBP3O60516 100 aaPredicted RBP6.01□□□□□ -1.45
PROM1-216ENST00000513946 SPINK2P20155 84 aa6.01□□□□□ -1.45
PROM1-216ENST00000513946 DSC3Q14574 896 aa6.01□□□□□ -1.45
PROM1-216ENST00000513946 POU4F3Q15319 338 aa6.01□□□□□ -1.45
PROM1-216ENST00000513946 EPS8L3Q8TE67 593 aaKnown RBP6.01□□□□□ -1.45
PROM1-216ENST00000513946 DMRTB1Q96MA1 342 aa6.01□□□□□ -1.45
PROM1-216ENST00000513946 EHD4Q9H223 541 aa6.01□□□□□ -1.45
PROM1-216ENST00000513946 GSX1Q9H4S2 264 aaPredicted RBP6.01□□□□□ -1.45
PROM1-216ENST00000513946 PCMTD2Q9NV79 361 aa6.01□□□□□ -1.45
PROM1-216ENST00000513946 BRD1O95696 1058 aa6□□□□□ -1.45
PROM1-216ENST00000513946 CYP11A1P05108 521 aa6□□□□□ -1.45
PROM1-216ENST00000513946 F13BP05160 661 aa6□□□□□ -1.45
PROM1-216ENST00000513946 FAAP100Q0VG06 881 aa6□□□□□ -1.45
PROM1-216ENST00000513946 GRM2Q14416 872 aa6□□□□□ -1.45
PROM1-216ENST00000513946 TMC7Q7Z402 723 aa6□□□□□ -1.45
PROM1-216ENST00000513946 DTX1Q86Y01 620 aa6□□□□□ -1.45
PROM1-216ENST00000513946 FBLIM1Q8WUP2 373 aa6□□□□□ -1.45
PROM1-216ENST00000513946 GATA6Q92908 595 aa6□□□□□ -1.45
PROM1-216ENST00000513946 WDR64B1ANS9 1081 aa5.99□□□□□ -1.45
PROM1-216ENST00000513946 GAS2O43903 313 aaKnown RBP5.99□□□□□ -1.45
PROM1-216ENST00000513946 HOXA10P31260 410 aaPredicted RBP5.99□□□□□ -1.45
PROM1-216ENST00000513946 ADMP35318 185 aa5.99□□□□□ -1.45
PROM1-216ENST00000513946 RPS26P11Q5JNZ5 115 aaPredicted RBP5.99□□□□□ -1.45
PROM1-216ENST00000513946 INTS5Q6P9B9 1019 aaKnown RBP5.99□□□□□ -1.45
PROM1-216ENST00000513946 MFSD14AQ96MC6 490 aa5.99□□□□□ -1.45
PROM1-216ENST00000513946 FAM95CA0A1B0GW59 222 aa5.98□□□□□ -1.45
PROM1-216ENST00000513946 ADH5P11766 374 aa5.98□□□□□ -1.45
PROM1-216ENST00000513946 NFKBIBQ15653 356 aa5.98□□□□□ -1.45
PROM1-216ENST00000513946 PI16Q6UXB8 463 aa5.98□□□□□ -1.45
PROM1-216ENST00000513946 SEZ6L2Q6UXD5 910 aa5.98□□□□□ -1.45
PROM1-216ENST00000513946 TMC1Q8TDI8 760 aa5.98□□□□□ -1.45
PROM1-216ENST00000513946 ACTL7BQ9Y614 415 aa5.98□□□□□ -1.45
PROM1-216ENST00000513946 SYNGAP1Q96PV0 1343 aa5.98□□□□□ -1.45
PROM1-216ENST00000513946 USP11P51784 963 aa5.97□□□□□ -1.45
PROM1-216ENST00000513946 ACSS3Q9H6R3 686 aa5.97□□□□□ -1.45
PROM1-216ENST00000513946 PRKAG2Q9UGJ0 569 aa5.97□□□□□ -1.45
PROM1-216ENST00000513946 DCTN4Q9UJW0 460 aa5.97□□□□□ -1.45
PROM1-216ENST00000513946 PPP1R9AQ9ULJ8 1098 aa5.97□□□□□ -1.45
PROM1-216ENST00000513946 TREHO43280 583 aa5.96□□□□□ -1.46
PROM1-216ENST00000513946 AOC2O75106 756 aa5.96□□□□□ -1.46
PROM1-216ENST00000513946 GADD45BO75293 160 aaPredicted RBP5.96□□□□□ -1.46
PROM1-216ENST00000513946 RXRBP28702 533 aa5.96□□□□□ -1.46
PROM1-216ENST00000513946 ZNF157P51786 506 aaPredicted RBP5.96□□□□□ -1.46
PROM1-216ENST00000513946 PLCB3Q01970 1234 aa5.96□□□□□ -1.46
PROM1-216ENST00000513946 WDR89Q96FK6 387 aaPredicted RBP5.96□□□□□ -1.46
PROM1-216ENST00000513946 KRTAP4-12Q9BQ66 201 aa5.96□□□□□ -1.46
PROM1-216ENST00000513946 WDR18Q9BV38 432 aa5.96□□□□□ -1.46
PROM1-216ENST00000513946 ZFYVE1Q9HBF4 777 aa5.96□□□□□ -1.46
PROM1-216ENST00000513946 OAS3Q9Y6K5 1087 aaKnown RBP5.96□□□□□ -1.46
PROM1-216ENST00000513946 COL17A1Q9UMD9 1497 aaPredicted RBP5.96□□□□□ -1.46
PROM1-216ENST00000513946 ZNF862O60290 1169 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 NFICP08651 508 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 GRIK1P39086 918 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 AKAP4Q5JQC9 854 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 PAOXQ6QHF9 649 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 ZAR1Q86SH2 424 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 PDZD3Q86UT5 571 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 CORO1BQ9BR76 489 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 BCO2Q9BYV7 579 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 SEMA6CQ9H3T2 930 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 C1GALT1Q9NS00 363 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 FAM105AQ9NUU6 356 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 PIM2Q9P1W9 311 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 TRAK1Q9UPV9 953 aa5.95□□□□□ -1.46
PROM1-216ENST00000513946 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.94□□□□□ -1.46
PROM1-216ENST00000513946 LIG1P18858 919 aa5.94□□□□□ -1.46
PROM1-216ENST00000513946 GP2P55259 537 aaKnown RBP5.94□□□□□ -1.46
PROM1-216ENST00000513946 AP3B2Q13367 1082 aa5.94□□□□□ -1.46
PROM1-216ENST00000513946 ENOX2Q16206 610 aaKnown RBP5.94□□□□□ -1.46
PROM1-216ENST00000513946 MSMPQ1L6U9 139 aa5.94□□□□□ -1.46
PROM1-216ENST00000513946 NFXL1Q6ZNB6 911 aa5.94□□□□□ -1.46
PROM1-216ENST00000513946 DYMQ7RTS9 669 aa5.94□□□□□ -1.46
PROM1-216ENST00000513946 FBXL6Q8N531 539 aa5.94□□□□□ -1.46
PROM1-216ENST00000513946 DDX54Q8TDD1 881 aaKnown RBP5.94□□□□□ -1.46
PROM1-216ENST00000513946 STK35Q8TDR2 534 aa5.94□□□□□ -1.46
PROM1-216ENST00000513946 CCDC86Q9H6F5 360 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms