RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 ARID3AQ99856 593 aa8.88□□□□□ -0.99
SSBP2-217ENST00000513785 F13BP05160 661 aa8.87□□□□□ -0.99
SSBP2-217ENST00000513785 GP2P55259 537 aaKnown RBP8.87□□□□□ -0.99
SSBP2-217ENST00000513785 SOX4Q06945 474 aaPredicted RBP8.87□□□□□ -0.99
SSBP2-217ENST00000513785 MCTP1Q6DN14 999 aa8.87□□□□□ -0.99
SSBP2-217ENST00000513785 FAM95CA0A1B0GW59 222 aa8.86□□□□□ -0.99
SSBP2-217ENST00000513785 ECEL1O95672 775 aa8.86□□□□□ -0.99
SSBP2-217ENST00000513785 USP11P51784 963 aa8.86□□□□□ -0.99
SSBP2-217ENST00000513785 NFKBIBQ15653 356 aa8.86□□□□□ -0.99
SSBP2-217ENST00000513785 KIAA0319Q5VV43 1072 aa8.86□□□□□ -0.99
SSBP2-217ENST00000513785 FAM129BQ96TA1 746 aa8.86□□□□□ -0.99
SSBP2-217ENST00000513785 COL17A1Q9UMD9 1497 aaPredicted RBP8.85□□□□□ -0.99
SSBP2-217ENST00000513785 NDUFB5O43674 189 aa8.85□□□□□ -0.99
SSBP2-217ENST00000513785 IGHA2P01877 340 aa8.85□□□□□ -0.99
SSBP2-217ENST00000513785 TXNDC2Q86VQ3 553 aa8.85□□□□□ -0.99
SSBP2-217ENST00000513785 KRTAP4-12Q9BQ66 201 aa8.85□□□□□ -0.99
SSBP2-217ENST00000513785 TRIM56Q9BRZ2 755 aaKnown RBP8.85□□□□□ -0.99
SSBP2-217ENST00000513785 NPHS2Q9NP85 383 aa8.85□□□□□ -0.99
SSBP2-217ENST00000513785 ADMP35318 185 aa8.84□□□□□ -0.99
SSBP2-217ENST00000513785 POU4F3Q15319 338 aa8.84□□□□□ -0.99
SSBP2-217ENST00000513785 EHD4Q9H223 541 aa8.84□□□□□ -0.99
SSBP2-217ENST00000513785 PIM2Q9P1W9 311 aa8.84□□□□□ -0.99
SSBP2-217ENST00000513785 GPR182O15218 404 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 CPNE3O75131 537 aaKnown RBP8.83□□□□□ -1
SSBP2-217ENST00000513785 B3GALT4O96024 378 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 CYP11A1P05108 521 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 ADH5P11766 374 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 PAOXQ6QHF9 649 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 RETREG2Q8NC44 543 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 NIF3L1Q9GZT8 377 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 ZNF576Q9H609 170 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 ATG3Q9NT62 314 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 ACTL7BQ9Y614 415 aa8.83□□□□□ -1
SSBP2-217ENST00000513785 SUPT5HO00267 1087 aaKnown RBP8.82□□□□□ -1
SSBP2-217ENST00000513785 NEFLP07196 543 aa8.82□□□□□ -1
SSBP2-217ENST00000513785 PDE3BQ13370 1112 aa8.82□□□□□ -1
SSBP2-217ENST00000513785 CCDC74AQ96AQ1 378 aa8.82□□□□□ -1
SSBP2-217ENST00000513785 LEMD3Q9Y2U8 911 aa8.82□□□□□ -1
SSBP2-217ENST00000513785 EIF1AYO14602 144 aaKnown RBP8.81□□□□□ -1
SSBP2-217ENST00000513785 WNT11O96014 354 aa8.81□□□□□ -1
SSBP2-217ENST00000513785 ITPKAP23677 461 aa8.81□□□□□ -1
SSBP2-217ENST00000513785 IRAK1P51617 712 aa8.81□□□□□ -1
SSBP2-217ENST00000513785 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
SSBP2-217ENST00000513785 EZH1Q92800 747 aaPredicted RBP8.81□□□□□ -1
SSBP2-217ENST00000513785 PRKAG2Q9UGJ0 569 aa8.81□□□□□ -1
SSBP2-217ENST00000513785 EIF4EBP3O60516 100 aaPredicted RBP8.8□□□□□ -1
SSBP2-217ENST00000513785 NFICP08651 508 aa8.8□□□□□ -1
SSBP2-217ENST00000513785 DYMQ7RTS9 669 aa8.8□□□□□ -1
SSBP2-217ENST00000513785 TMC1Q8TDI8 760 aa8.8□□□□□ -1
SSBP2-217ENST00000513785 GATA6Q92908 595 aa8.8□□□□□ -1
SSBP2-217ENST00000513785 CITED4Q96RK1 184 aa8.8□□□□□ -1
SSBP2-217ENST00000513785 OSBPL1AQ9BXW6 950 aa8.8□□□□□ -1
SSBP2-217ENST00000513785 ABCB6Q9NP58 842 aa8.8□□□□□ -1
SSBP2-217ENST00000513785 FAM105AQ9NUU6 356 aa8.8□□□□□ -1
SSBP2-217ENST00000513785 FOSL1P15407 271 aa8.79□□□□□ -1
SSBP2-217ENST00000513785 GIMAP7Q8NHV1 300 aa8.79□□□□□ -1
SSBP2-217ENST00000513785 TBC1D32Q96NH3 1257 aa8.79□□□□□ -1
SSBP2-217ENST00000513785 CORO1BQ9BR76 489 aa8.79□□□□□ -1
SSBP2-217ENST00000513785 RAD18Q9NS91 495 aa8.79□□□□□ -1
SSBP2-217ENST00000513785 FAM170BA6NMN3 283 aa8.78□□□□□ -1
SSBP2-217ENST00000513785 TAL1P17542 331 aaPredicted RBP8.78□□□□□ -1
SSBP2-217ENST00000513785 RAB6AP20340 208 aa8.78□□□□□ -1
SSBP2-217ENST00000513785 ZNF157P51786 506 aaPredicted RBP8.78□□□□□ -1
SSBP2-217ENST00000513785 MSMPQ1L6U9 139 aa8.78□□□□□ -1
SSBP2-217ENST00000513785 ZAR1Q86SH2 424 aa8.78□□□□□ -1
SSBP2-217ENST00000513785 EPS8L3Q8TE67 593 aaKnown RBP8.78□□□□□ -1
SSBP2-217ENST00000513785 SEMA6CQ9H3T2 930 aa8.78□□□□□ -1
SSBP2-217ENST00000513785 FAAP100Q0VG06 881 aa8.77□□□□□ -1.01
SSBP2-217ENST00000513785 KRTAP1-3Q8IUG1 177 aa8.77□□□□□ -1.01
SSBP2-217ENST00000513785 GLIS3Q8NEA6 775 aa8.77□□□□□ -1.01
SSBP2-217ENST00000513785 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1.01
SSBP2-217ENST00000513785 ACSS3Q9H6R3 686 aa8.77□□□□□ -1.01
SSBP2-217ENST00000513785 TMEM238LA0A1B0GVL6 79 aa8.76□□□□□ -1.01
SSBP2-217ENST00000513785 DYNC1LI2O43237 492 aaPredicted RBP8.76□□□□□ -1.01
SSBP2-217ENST00000513785 AOC2O75106 756 aa8.76□□□□□ -1.01
SSBP2-217ENST00000513785 GADD45BO75293 160 aaPredicted RBP8.76□□□□□ -1.01
SSBP2-217ENST00000513785 GRM2Q14416 872 aa8.76□□□□□ -1.01
SSBP2-217ENST00000513785 PRPF40BQ6NWY9 871 aaKnown RBP8.76□□□□□ -1.01
SSBP2-217ENST00000513785 DDX54Q8TDD1 881 aaKnown RBP8.76□□□□□ -1.01
SSBP2-217ENST00000513785 WDR89Q96FK6 387 aaPredicted RBP8.76□□□□□ -1.01
SSBP2-217ENST00000513785 WDR18Q9BV38 432 aa8.76□□□□□ -1.01
SSBP2-217ENST00000513785 YIPF2Q9BWQ6 316 aa8.76□□□□□ -1.01
SSBP2-217ENST00000513785 PPP1R9AQ9ULJ8 1098 aa8.76□□□□□ -1.01
SSBP2-217ENST00000513785 AP4E1Q9UPM8 1137 aa8.76□□□□□ -1.01
SSBP2-217ENST00000513785 ASPAP45381 313 aa8.75□□□□□ -1.01
SSBP2-217ENST00000513785 PTPN12Q05209 780 aaKnown RBP8.75□□□□□ -1.01
SSBP2-217ENST00000513785 NFXL1Q6ZNB6 911 aa8.75□□□□□ -1.01
SSBP2-217ENST00000513785 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
SSBP2-217ENST00000513785 CSRNP1Q96S65 589 aa8.75□□□□□ -1.01
SSBP2-217ENST00000513785 ZC3H12CQ9C0D7 883 aaKnown RBP8.75□□□□□ -1.01
SSBP2-217ENST00000513785 GSX1Q9H4S2 264 aaPredicted RBP8.75□□□□□ -1.01
SSBP2-217ENST00000513785 ZFYVE1Q9HBF4 777 aa8.75□□□□□ -1.01
SSBP2-217ENST00000513785 CYP26A1O43174 497 aa8.74□□□□□ -1.01
SSBP2-217ENST00000513785 PDE3AQ14432 1141 aa8.74□□□□□ -1.01
SSBP2-217ENST00000513785 CPSF6Q16630 551 aaKnown RBP eCLIP8.74□□□□□ -1.01
SSBP2-217ENST00000513785 HP1BP3Q5SSJ5 553 aaPredicted RBP8.74□□□□□ -1.01
SSBP2-217ENST00000513785 PI16Q6UXB8 463 aa8.74□□□□□ -1.01
SSBP2-217ENST00000513785 SEZ6L2Q6UXD5 910 aa8.74□□□□□ -1.01
SSBP2-217ENST00000513785 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
SSBP2-217ENST00000513785 RBCK1Q9BYM8 510 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms