RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 AEBP2Q6ZN18 517 aaPredicted RBP31.11■■■□□ 2.57
SSBP2-217ENST00000513785 CHIC1Q5VXU3 224 aa29.73■■■□□ 2.35
SSBP2-217ENST00000513785 SENP3Q9H4L4 574 aaPredicted RBP26.38■■□□□ 1.81
SSBP2-217ENST00000513785 PHF23Q9BUL5 403 aaPredicted RBP26.17■■□□□ 1.78
SSBP2-217ENST00000513785 FOXD1Q16676 465 aa24.64■■□□□ 1.54
SSBP2-217ENST00000513785 PLPPR3Q6T4P5 718 aa23.85■■□□□ 1.41
SSBP2-217ENST00000513785 PPP6R1Q9UPN7 881 aa23.31■■□□□ 1.32
SSBP2-217ENST00000513785 ADRA2BP18089 450 aa23.23■■□□□ 1.31
SSBP2-217ENST00000513785 PIAS4Q8N2W9 510 aaPredicted RBP23.05■■□□□ 1.28
SSBP2-217ENST00000513785 MSH5O43196 834 aa22.85■■□□□ 1.25
SSBP2-217ENST00000513785 POTEDQ86YR6 584 aa21.92■■□□□ 1.1
SSBP2-217ENST00000513785 MAPK8IP2Q13387 824 aaPredicted RBP21.28■■□□□ 1
SSBP2-217ENST00000513785 SCAF1Q9H7N4 1312 aaKnown RBP21.12■□□□□ 0.97
SSBP2-217ENST00000513785 DMRT2Q9Y5R5 561 aa20.99■□□□□ 0.95
SSBP2-217ENST00000513785 PPP4R3CPQ6ZMV5 832 aa20.98■□□□□ 0.95
SSBP2-217ENST00000513785 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
SSBP2-217ENST00000513785 HOXD11P31277 338 aaPredicted RBP20.33■□□□□ 0.85
SSBP2-217ENST00000513785 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
SSBP2-217ENST00000513785 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
SSBP2-217ENST00000513785 DCAF8L1A6NGE4 600 aa20.14■□□□□ 0.81
SSBP2-217ENST00000513785 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
SSBP2-217ENST00000513785 KCNA4P22459 653 aa19.87■□□□□ 0.77
SSBP2-217ENST00000513785 RNF39Q9H2S5 420 aa19.58■□□□□ 0.72
SSBP2-217ENST00000513785 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
SSBP2-217ENST00000513785 CACNB1Q02641 598 aaPredicted RBP19.49■□□□□ 0.71
SSBP2-217ENST00000513785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
SSBP2-217ENST00000513785 C1QBPQ07021 282 aaKnown RBP19.27■□□□□ 0.68
SSBP2-217ENST00000513785 SLC4A2P04920 1241 aa19.04■□□□□ 0.64
SSBP2-217ENST00000513785 U3KPZ7 1027 aaPredicted RBP19.02■□□□□ 0.64
SSBP2-217ENST00000513785 SLC4A1APQ9BWU0 796 aaKnown RBP18.76■□□□□ 0.59
SSBP2-217ENST00000513785 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
SSBP2-217ENST00000513785 CAPN15O75808 1086 aa18.6■□□□□ 0.57
SSBP2-217ENST00000513785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
SSBP2-217ENST00000513785 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
SSBP2-217ENST00000513785 DSG3P32926 999 aa18.44■□□□□ 0.54
SSBP2-217ENST00000513785 MYCNP04198 464 aaPredicted RBP18.41■□□□□ 0.54
SSBP2-217ENST00000513785 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
SSBP2-217ENST00000513785 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
SSBP2-217ENST00000513785 APLP2Q06481 763 aa18.38■□□□□ 0.53
SSBP2-217ENST00000513785 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
SSBP2-217ENST00000513785 ZBTB22O15209 634 aa18.31■□□□□ 0.52
SSBP2-217ENST00000513785 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
SSBP2-217ENST00000513785 ABCB7O75027 752 aa18.23■□□□□ 0.51
SSBP2-217ENST00000513785 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
SSBP2-217ENST00000513785 POLA2Q14181 598 aa17.97■□□□□ 0.47
SSBP2-217ENST00000513785 ATXN8OSP0DMR3 200 aa17.76■□□□□ 0.43
SSBP2-217ENST00000513785 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
SSBP2-217ENST00000513785 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
SSBP2-217ENST00000513785 RBM42Q9BTD8 480 aaKnown RBP17.5■□□□□ 0.39
SSBP2-217ENST00000513785 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
SSBP2-217ENST00000513785 OSCARQ8IYS5 282 aa17.37■□□□□ 0.37
SSBP2-217ENST00000513785 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
SSBP2-217ENST00000513785 FBLN2P98095 1184 aa17.23■□□□□ 0.35
SSBP2-217ENST00000513785 POTEHQ6S545 545 aa17.21■□□□□ 0.35
SSBP2-217ENST00000513785 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
SSBP2-217ENST00000513785 REM2Q8IYK8 340 aaPredicted RBP17.09■□□□□ 0.33
SSBP2-217ENST00000513785 CHRDL2Q6WN34 429 aa17.08■□□□□ 0.32
SSBP2-217ENST00000513785 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
SSBP2-217ENST00000513785 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
SSBP2-217ENST00000513785 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
SSBP2-217ENST00000513785 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
SSBP2-217ENST00000513785 PITPNM1O00562 1244 aa16.9■□□□□ 0.3
SSBP2-217ENST00000513785 SSUH2Q9Y2M2 353 aa16.87■□□□□ 0.29
SSBP2-217ENST00000513785 PIP4P2Q8N4L2 257 aa16.76■□□□□ 0.27
SSBP2-217ENST00000513785 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
SSBP2-217ENST00000513785 FXR2P51116 673 aaKnown RBP eCLIP16.68■□□□□ 0.26
SSBP2-217ENST00000513785 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
SSBP2-217ENST00000513785 SPDYE1Q8NFV5 336 aaPredicted RBP16.67■□□□□ 0.26
SSBP2-217ENST00000513785 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
SSBP2-217ENST00000513785 PRKAR2AP13861 404 aaKnown RBP16.46■□□□□ 0.23
SSBP2-217ENST00000513785 PRR29P0C7W0 189 aa16.42■□□□□ 0.22
SSBP2-217ENST00000513785 HAX1O00165 279 aa16.37■□□□□ 0.21
SSBP2-217ENST00000513785 CHADLQ6NUI6 762 aa16.37■□□□□ 0.21
SSBP2-217ENST00000513785 EVX2Q03828 476 aa16.27■□□□□ 0.2
SSBP2-217ENST00000513785 SP7Q8TDD2 431 aaPredicted RBP16.25■□□□□ 0.19
SSBP2-217ENST00000513785 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.19
SSBP2-217ENST00000513785 PROM2Q8N271 834 aa16.16■□□□□ 0.18
SSBP2-217ENST00000513785 C19orf67A6NJJ6 358 aa16.14■□□□□ 0.17
SSBP2-217ENST00000513785 FARP1Q9Y4F1 1045 aaPredicted RBP16.12■□□□□ 0.17
SSBP2-217ENST00000513785 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
SSBP2-217ENST00000513785 FKBP8Q14318 412 aa15.99■□□□□ 0.15
SSBP2-217ENST00000513785 CD44P16070 742 aaKnown RBP15.94■□□□□ 0.14
SSBP2-217ENST00000513785 MNX1P50219 401 aaPredicted RBP15.89■□□□□ 0.13
SSBP2-217ENST00000513785 GABBR2O75899 941 aa15.85■□□□□ 0.13
SSBP2-217ENST00000513785 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
SSBP2-217ENST00000513785 NPM1P06748 294 aaKnown RBP eCLIP15.75■□□□□ 0.11
SSBP2-217ENST00000513785 MIER1Q8N108 512 aa15.74■□□□□ 0.11
SSBP2-217ENST00000513785 ZNF579Q8NAF0 562 aaKnown RBP15.68■□□□□ 0.1
SSBP2-217ENST00000513785 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
SSBP2-217ENST00000513785 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
SSBP2-217ENST00000513785 PLEKHG5O94827 1062 aa15.6■□□□□ 0.09
SSBP2-217ENST00000513785 PHF12Q96QT6 1004 aa15.6■□□□□ 0.09
SSBP2-217ENST00000513785 CLCN6P51797 869 aa15.57■□□□□ 0.08
SSBP2-217ENST00000513785 POTEIP0CG38 1075 aa15.56■□□□□ 0.08
SSBP2-217ENST00000513785 TSPYL2Q9H2G4 693 aaPredicted RBP15.55■□□□□ 0.08
SSBP2-217ENST00000513785 GALR2O43603 387 aaPredicted RBP15.53■□□□□ 0.08
SSBP2-217ENST00000513785 RASEFQ8IZ41 740 aa15.5■□□□□ 0.07
SSBP2-217ENST00000513785 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
SSBP2-217ENST00000513785 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
SSBP2-217ENST00000513785 DCBLD2Q96PD2 775 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms