RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 IRX5P78411 483 aaPredicted RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 Q3C1V9 767 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 RILPL1Q5EBL4 403 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 NUDT18Q6ZVK8 323 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 MICALCLQ6ZW33 695 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 FCHSD1Q86WN1 690 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 GGA1Q9UJY5 639 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 G3BP2Q9UN86 482 aaKnown RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 ATAD2Q6PL18 1390 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 ZBED9Q6R2W3 1325 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 ALDH1B1P30837 517 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 CEBPAP49715 358 aaPredicted RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 CAVIN1Q6NZI2 390 aaKnown RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 ZNF277Q9NRM2 450 aaPredicted RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 GOLIM4O00461 696 aa10.02□□□□□ -0.8
VCAN-208ENST00000512590 HSPA1LP34931 641 aa10.02□□□□□ -0.8
VCAN-208ENST00000512590 SARNPP82979 210 aaKnown RBP10.02□□□□□ -0.8
VCAN-208ENST00000512590 SLC9A5Q14940 896 aa10.02□□□□□ -0.8
VCAN-208ENST00000512590 KRT79Q5XKE5 535 aa10.02□□□□□ -0.8
VCAN-208ENST00000512590 TRAIPQ9BWF2 469 aa10.02□□□□□ -0.8
VCAN-208ENST00000512590 DDX39AO00148 427 aaKnown RBP10.02□□□□□ -0.81
VCAN-208ENST00000512590 NFKBIAP25963 317 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 FLAD1Q8NFF5 587 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 ESR2Q92731 530 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 MCM9Q9NXL9 1143 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 NOB1Q9ULX3 412 aaKnown RBP10.02□□□□□ -0.81
VCAN-208ENST00000512590 WDR7Q9Y4E6 1490 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 HNRNPCL2B2RXH8 293 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 ZSCAN12O43309 604 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 HNRNPCL1O60812 293 aaKnown RBP10.02□□□□□ -0.81
VCAN-208ENST00000512590 AAMPQ13685 434 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 CLUL1Q15846 466 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 BBS5Q8N3I7 341 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 IPO11Q9UI26 975 aaKnown RBP10.02□□□□□ -0.81
VCAN-208ENST00000512590 FRMD4BQ9Y2L6 1034 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 SLC4A7Q9Y6M7 1214 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 KIF28PB7ZC32 967 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 TOP1P11387 765 aaKnown RBP10.02□□□□□ -0.81
VCAN-208ENST00000512590 ADPGKQ9BRR6 497 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 CCDC68Q9H2F9 335 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 NUB1Q9Y5A7 615 aa10.02□□□□□ -0.81
VCAN-208ENST00000512590 TAF7Q15545 349 aaPredicted RBP10.01□□□□□ -0.81
VCAN-208ENST00000512590 AFAP1Q8N556 730 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 PANK1Q8TE04 598 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 YIPF2Q9BWQ6 316 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 F8W8V4 182 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 METAP2P50579 478 aaKnown RBP eCLIP10.01□□□□□ -0.81
VCAN-208ENST00000512590 PDCL2Q8N4E4 241 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 IFT81Q8WYA0 676 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 CCDC8Q9H0W5 538 aaPredicted RBP10.01□□□□□ -0.81
VCAN-208ENST00000512590 ABCF3Q9NUQ8 709 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 SAP30BPQ9UHR5 308 aaKnown RBP10.01□□□□□ -0.81
VCAN-208ENST00000512590 JAG2Q9Y219 1238 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 FHOD3Q2V2M9 1422 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 ANKRD24Q8TF21 1146 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 KIF1BPQ96EK5 621 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 DNAJC7Q99615 494 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 CNPY2Q9Y2B0 182 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 POLR2BP30876 1174 aaKnown RBP10.01□□□□□ -0.81
VCAN-208ENST00000512590 ZNF165P49910 485 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 LIN9Q5TKA1 542 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 GDAP1Q8TB36 358 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 NSRP1Q9H0G5 558 aaKnown RBP10.01□□□□□ -0.81
VCAN-208ENST00000512590 MIS18AQ9NYP9 233 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 SRGAP2BP0DMP2 458 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 MICU3Q86XE3 530 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 LMBR1Q8WVP7 490 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 CCPG1Q9ULG6 757 aa10.01□□□□□ -0.81
VCAN-208ENST00000512590 KHDRBS2Q5VWX1 349 aaKnown RBP10□□□□□ -0.81
VCAN-208ENST00000512590 NLRX1Q86UT6 975 aa10□□□□□ -0.81
VCAN-208ENST00000512590 PRKRIP1Q9H875 184 aaPredicted RBP10□□□□□ -0.81
VCAN-208ENST00000512590 NBPF26B4DH59 902 aa10□□□□□ -0.81
VCAN-208ENST00000512590 RAB11FIP3O75154 756 aa10□□□□□ -0.81
VCAN-208ENST00000512590 PDE4DQ08499 809 aa10□□□□□ -0.81
VCAN-208ENST00000512590 RBBP5Q15291 538 aaKnown RBP10□□□□□ -0.81
VCAN-208ENST00000512590 POMGNT1Q8WZA1 660 aa10□□□□□ -0.81
VCAN-208ENST00000512590 UBXN4Q92575 508 aa10□□□□□ -0.81
VCAN-208ENST00000512590 SUFUQ9UMX1 484 aa10□□□□□ -0.81
VCAN-208ENST00000512590 C11orf95C9JLR9 678 aaPredicted RBP10□□□□□ -0.81
VCAN-208ENST00000512590 BNIP3LO60238 219 aa10□□□□□ -0.81
VCAN-208ENST00000512590 PTPREP23469 700 aa10□□□□□ -0.81
VCAN-208ENST00000512590 ASIC1P78348 528 aa10□□□□□ -0.81
VCAN-208ENST00000512590 TEX11Q8IYF3 940 aa10□□□□□ -0.81
VCAN-208ENST00000512590 JAKMIP2Q96AA8 810 aa10□□□□□ -0.81
VCAN-208ENST00000512590 ANAPC5Q9UJX4 755 aa10□□□□□ -0.81
VCAN-208ENST00000512590 AKR1B10O60218 316 aa10□□□□□ -0.81
VCAN-208ENST00000512590 TMOD1P28289 359 aa10□□□□□ -0.81
VCAN-208ENST00000512590 MAN1A1P33908 653 aa10□□□□□ -0.81
VCAN-208ENST00000512590 HSPA2P54652 639 aa10□□□□□ -0.81
VCAN-208ENST00000512590 KCTD2Q14681 263 aa10□□□□□ -0.81
VCAN-208ENST00000512590 FAM98CQ17RN3 349 aaKnown RBP10□□□□□ -0.81
VCAN-208ENST00000512590 GNPTABQ3T906 1256 aa10□□□□□ -0.81
VCAN-208ENST00000512590 CTAGE5O15320 804 aa10□□□□□ -0.81
VCAN-208ENST00000512590 BPIFB4P59827 614 aa10□□□□□ -0.81
VCAN-208ENST00000512590 PPP1R7Q15435 360 aa10□□□□□ -0.81
VCAN-208ENST00000512590 APOL6Q9BWW8 343 aa10□□□□□ -0.81
VCAN-208ENST00000512590 STMN4Q9H169 189 aaPredicted RBP10□□□□□ -0.81
VCAN-208ENST00000512590 SLC13A4Q9UKG4 626 aa10□□□□□ -0.81
VCAN-208ENST00000512590 SNRPA1P09661 255 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms