RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 EXOSC10Q01780 885 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 NT5DC1Q5TFE4 455 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 PCSK5Q92824 1860 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 IGSF10Q6WRI0 2623 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 TCRBV5S4A2TA0A5A2 114 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 WFS1O76024 890 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 GYS1P13807 737 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 APLP1P51693 650 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 HAP1P54257 671 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 RBL2Q08999 1139 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 NCBP1Q09161 790 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 AAMPQ13685 434 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 CRISPLD2Q9H0B8 497 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 DEFB129Q9H1M3 183 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 DNAH6Q9C0G6 4158 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 FBN3Q75N90 2809 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 LRRK1Q38SD2 2015 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 RPS6KA4O75676 772 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 CAPN15O75808 1086 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 TFRCP02786 760 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 SARSP49591 514 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 DDR1Q08345 913 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 MSL3Q8N5Y2 521 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 KLHDC4Q8TBB5 520 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 USP27XA6NNY8 438 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 UBE2Q2LH0YL09 131 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 GADD45BO75293 160 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 POU5F1Q01860 360 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 EIF4A2Q14240 407 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 PTPAQ15257 358 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 GGT6Q6P531 493 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 POTEEQ6S8J3 1075 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 ZNF572Q7Z3I7 529 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 PLA2G12BQ9BX93 195 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 PRM3Q9NNZ6 103 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 SSUH2Q9Y2M2 353 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 NF1P21359 2839 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 PRAMEF22A3QJZ6 481 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 MYBP10242 640 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 HOXC8P31273 242 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 HSPA4P34932 840 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 ALDH1L2Q3SY69 923 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 STYK1Q6J9G0 422 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 ATG9AQ7Z3C6 839 aa2.1□□□□□ -2.07
TRAPPC13-211ENST00000512009 FBN2P35556 2912 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 CCDC171Q6TFL3 1326 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 TRIM64BA6NI03 449 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 PLA2G4AP47712 749 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 TM4SF4P48230 202 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 FKBP1BP68106 108 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 HNRNPUQ00839 825 aaKnown RBP eCLIP2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 PLCB3Q01970 1234 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 GSE1Q14687 1217 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 BEND3Q5T5X7 828 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 UBAP2Q5T6F2 1119 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 SH3RF1Q7Z6J0 888 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 ZDHHC14Q8IZN3 488 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 TSR2Q969E8 191 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 TRIM44Q96DX7 344 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 PLAC1Q9HBJ0 212 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 EXOC6BQ9Y2D4 811 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 MROH7-TTC4A0A0A0MT08 1334 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 ATP6V1AP38606 617 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 ANTXR2P58335 489 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 FAM161AQ3B820 660 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 TSC1Q92574 1164 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 USP6NLQ92738 828 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 PURBQ96QR8 312 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 TXLNGYQ9BZA5 131 aa2.09□□□□□ -2.07
TRAPPC13-211ENST00000512009 A0A087X0B3 334 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 SIGLEC16A6NMB1 481 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 PROB1E7EW31 1015 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 E9PQ18 207 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 IRF6O14896 467 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 EPB41L2O43491 1005 aaKnown RBP2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 FOXO3O43524 673 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 PROSER3Q2NL68 480 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 LRIT3Q3SXY7 679 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 LBX2Q6XYB7 198 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 C4orf32Q8N8J7 132 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 PIK3R5Q8WYR1 880 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 BCANQ96GW7 911 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 TNKSO95271 1327 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 GRIN3BO60391 1043 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 EFEMP2O95967 443 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 MTHFSP49914 203 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 C1QBPQ07021 282 aaKnown RBP2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 HSF5Q4G112 596 aaPredicted RBP2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 FKBP1CQ5VVH2 108 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 E4F1Q66K89 784 aaPredicted RBP2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 CRIPAKQ8N1N5 446 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 MAP3K14Q99558 947 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 PDGFDQ9GZP0 370 aaPredicted RBP2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 HYPKQ9NX55 129 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 ZNF112Q9UJU3 913 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 MUC6Q6W4X9 2439 aa2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 TCF20Q9UGU0 1960 aaKnown RBP2.09□□□□□ -2.08
TRAPPC13-211ENST00000512009 WTIPA6NIX2 430 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 NRDCO43847 1150 aa2.08□□□□□ -2.08
TRAPPC13-211ENST00000512009 LIMK1P53667 647 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms