RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ZNF157P51786 506 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 NRG1Q02297 640 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 ADGRE1Q14246 886 aa5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 CCDC85BQ15834 202 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 TPTE2Q6XPS3 522 aa5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 C3orf58Q8NDZ4 430 aa5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 RNF34Q969K3 372 aa5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 USP31Q70CQ4 1352 aa5.55□□□□□ -1.52
TRAPPC11-207ENST00000511409 FAM229AH3BQW9 127 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 H2AFB1P0C5Y9 115 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 H2AFB2P0C5Z0 115 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 ITPKAP23677 461 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 PRSS36Q5K4E3 855 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 LDLRAD1Q5T700 205 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 TXNDC11Q6PKC3 985 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 IGF2-ASQ6U949 168 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 ADAMTSL4Q6UY14 1074 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 CEP44Q9C0F1 390 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 ADAM19Q9H013 955 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 CLEC4MQ9H2X3 399 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 ZNF576Q9H609 170 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 PPM1HQ9ULR3 514 aa5.54□□□□□ -1.52
TRAPPC11-207ENST00000511409 DLL1O00548 723 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 DEAF1O75398 565 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 ERCC5P28715 1186 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 HDLBPQ00341 1268 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 FANCCQ00597 558 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 PTPN12Q05209 780 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 PCDH1Q08174 1060 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 IKBKEQ14164 716 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 GRIK4Q16099 956 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 FAM117BQ6P1L5 589 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 HS2ST1Q7LGA3 356 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 NBPF11Q86T75 865 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 SLC7A3Q8WY07 619 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 METTL5Q9NRN9 209 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 GGT7Q9UJ14 662 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 SOX13Q9UN79 622 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 PPME1Q9Y570 386 aa5.53□□□□□ -1.52
TRAPPC11-207ENST00000511409 LINC01387J3KSC0 135 aa5.52□□□□□ -1.53
TRAPPC11-207ENST00000511409 EPHA1P21709 976 aa5.52□□□□□ -1.53
TRAPPC11-207ENST00000511409 ST13P50502 369 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-207ENST00000511409 PPP2R3AQ06190 1150 aa5.52□□□□□ -1.53
TRAPPC11-207ENST00000511409 MBTPS1Q14703 1052 aa5.52□□□□□ -1.53
TRAPPC11-207ENST00000511409 MAP3K11Q16584 847 aa5.52□□□□□ -1.53
TRAPPC11-207ENST00000511409 RPS26P11Q5JNZ5 115 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-207ENST00000511409 VN1R5Q7Z5H4 357 aa5.52□□□□□ -1.53
TRAPPC11-207ENST00000511409 SEC31BQ9NQW1 1179 aa5.52□□□□□ -1.53
TRAPPC11-207ENST00000511409 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 F6X3S4 739 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 H3BRJ5 948 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 TM4SF5O14894 197 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 ARL4DP49703 201 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 FAAP100Q0VG06 881 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 SETDB1Q15047 1291 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 SV2BQ7L1I2 683 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 TXNRD3Q86VQ6 643 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 NT5DC4Q86YG4 428 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 TMEM130Q8N3G9 435 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 DDX54Q8TDD1 881 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 NOC4LQ9BVI4 516 aaKnown RBP5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 GOLGA2P5Q9HBQ8 144 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 IGSF5Q9NSI5 407 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 TMEM39AQ9NV64 488 aa5.51□□□□□ -1.53
TRAPPC11-207ENST00000511409 CELA3AP09093 270 aa5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 ESRRAP11474 423 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 LMNB1P20700 586 aa5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 GSTM4Q03013 218 aa5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 ZNF423Q2M1K9 1284 aa5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 RELL1Q8IUW5 271 aa5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 WNT8BQ93098 351 aa5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 NECAB3Q96P71 396 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 TRIM56Q9BRZ2 755 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 SSBP4Q9BWG4 385 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 CARD10Q9BWT7 1032 aa5.5□□□□□ -1.53
TRAPPC11-207ENST00000511409 MINDY4BA8MYZ0 360 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 SOX1O00570 391 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 ENC1O14682 589 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 FSCN2O14926 492 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 B3GALT4O96024 378 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 GBP2P32456 591 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 ZNF394Q53GI3 561 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 HGSNATQ68CP4 663 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 SHISA2Q6UWI4 295 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 USP48Q86UV5 1035 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 METTL16Q86W50 562 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 MRPL18Q9H0U6 180 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 CCSER2Q9H7U1 834 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 CBX8Q9HC52 389 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 SAMM50Q9Y512 469 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 PCDHGB7Q9Y5F8 929 aa5.49□□□□□ -1.53
TRAPPC11-207ENST00000511409 PAGE1O75459 146 aa5.48□□□□□ -1.53
TRAPPC11-207ENST00000511409 RLBP1P12271 317 aa5.48□□□□□ -1.53
TRAPPC11-207ENST00000511409 PIP4K2BP78356 416 aa5.48□□□□□ -1.53
TRAPPC11-207ENST00000511409 C19orf57Q0VDD7 668 aa5.48□□□□□ -1.53
TRAPPC11-207ENST00000511409 PWP1Q13610 501 aa5.48□□□□□ -1.53
TRAPPC11-207ENST00000511409 TTBK2Q6IQ55 1244 aa5.48□□□□□ -1.53
TRAPPC11-207ENST00000511409 Q6ZS46 218 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms