RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 FMR1NBQ8N0W7 255 aaPredicted RBP20.89■□□□□ 0.94
CCHCR1-228ENST00000509552 NAT10Q9H0A0 1025 aaKnown RBP20.89■□□□□ 0.94
CCHCR1-228ENST00000509552 NRBP1Q9UHY1 535 aa20.89■□□□□ 0.94
CCHCR1-228ENST00000509552 ZBTB1Q9Y2K1 713 aa20.89■□□□□ 0.94
CCHCR1-228ENST00000509552 BCL9O00512 1426 aa20.89■□□□□ 0.94
CCHCR1-228ENST00000509552 MYSM1Q5VVJ2 828 aa20.89■□□□□ 0.93
CCHCR1-228ENST00000509552 CEP57L1Q8IYX8 460 aa20.89■□□□□ 0.93
CCHCR1-228ENST00000509552 RGS22Q8NE09 1264 aa20.89■□□□□ 0.93
CCHCR1-228ENST00000509552 PIH1D3Q9NQM4 214 aaKnown RBP20.89■□□□□ 0.93
CCHCR1-228ENST00000509552 ANGEL1Q9UNK9 670 aaKnown RBP20.89■□□□□ 0.93
CCHCR1-228ENST00000509552 ITGB4P16144 1822 aa20.89■□□□□ 0.93
CCHCR1-228ENST00000509552 ERVV-1B6SEH8 477 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 CCDC102BQ68D86 513 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 RAB11FIP4Q86YS3 637 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 CLIC4Q9Y696 253 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 AKAP11Q9UKA4 1901 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 LRP6O75581 1613 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 SPTLC2O15270 562 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 CDKL5O76039 1030 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 ARID4AP29374 1257 aaPredicted RBP20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 ZRSR1Q15695 479 aaKnown RBP20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 MRFAP1L1Q96HT8 127 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 ZNF532Q9HCE3 1301 aa20.88■□□□□ 0.93
CCHCR1-228ENST00000509552 MYH3P11055 1940 aa20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 A0A1B0GVL5 298 aa20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 PUM3Q15397 648 aaKnown RBP20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 CPLX2Q6PUV4 134 aaKnown RBP20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 DZIP3Q86Y13 1208 aaKnown RBP20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 LPIN2Q92539 896 aa20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 SLC4A9Q96Q91 983 aa20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 ZMYM6O95789 1325 aa20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 ANKRD36CQ5JPF3 1778 aa20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 METAP2P50579 478 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 SYTL4Q96C24 671 aaPredicted RBP20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 MROH5Q6ZUA9 1318 aa20.87■□□□□ 0.93
CCHCR1-228ENST00000509552 PDE6AP16499 860 aa20.86■□□□□ 0.93
CCHCR1-228ENST00000509552 IL6STP40189 918 aaPredicted RBP20.86■□□□□ 0.93
CCHCR1-228ENST00000509552 PHKA1P46020 1223 aa20.86■□□□□ 0.93
CCHCR1-228ENST00000509552 NDUFA8P51970 172 aa20.86■□□□□ 0.93
CCHCR1-228ENST00000509552 LRMPQ12912 555 aa20.86■□□□□ 0.93
CCHCR1-228ENST00000509552 TBC1D10CQ8IV04 446 aa20.86■□□□□ 0.93
CCHCR1-228ENST00000509552 AIDAQ96BJ3 306 aa20.86■□□□□ 0.93
CCHCR1-228ENST00000509552 NBPF3Q9H094 633 aa20.86■□□□□ 0.93
CCHCR1-228ENST00000509552 KIF23Q02241 960 aaPredicted RBP20.86■□□□□ 0.93
CCHCR1-228ENST00000509552 DDX60Q8IY21 1712 aaKnown RBP20.85■□□□□ 0.93
CCHCR1-228ENST00000509552 EXOC5O00471 708 aa20.85■□□□□ 0.93
CCHCR1-228ENST00000509552 SH2B2O14492 632 aaPredicted RBP20.85■□□□□ 0.93
CCHCR1-228ENST00000509552 DHX40Q8IX18 779 aaKnown RBP20.85■□□□□ 0.93
CCHCR1-228ENST00000509552 TMEM87BQ96K49 555 aa20.85■□□□□ 0.93
CCHCR1-228ENST00000509552 AK7Q96M32 723 aa20.85■□□□□ 0.93
CCHCR1-228ENST00000509552 NHSL1Q5SYE7 1610 aa20.85■□□□□ 0.93
CCHCR1-228ENST00000509552 ANO1Q5XXA6 986 aa20.84■□□□□ 0.93
CCHCR1-228ENST00000509552 CYB5R4Q7L1T6 521 aa20.84■□□□□ 0.93
CCHCR1-228ENST00000509552 NEMFO60524 1076 aa20.84■□□□□ 0.93
CCHCR1-228ENST00000509552 DISP2A7MBM2 1401 aa20.84■□□□□ 0.93
CCHCR1-228ENST00000509552 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.83■□□□□ 0.93
CCHCR1-228ENST00000509552 SLC5A1P13866 664 aa20.83■□□□□ 0.93
CCHCR1-228ENST00000509552 ZNF34Q8IZ26 560 aa20.83■□□□□ 0.93
CCHCR1-228ENST00000509552 ALG1Q9BT22 464 aa20.83■□□□□ 0.93
CCHCR1-228ENST00000509552 GJB4Q9NTQ9 266 aa20.83■□□□□ 0.93
CCHCR1-228ENST00000509552 KIAA1468Q9P260 1216 aa20.83■□□□□ 0.93
CCHCR1-228ENST00000509552 WWC3Q9ULE0 1092 aa20.83■□□□□ 0.93
CCHCR1-228ENST00000509552 STRCQ7RTU9 1775 aa20.83■□□□□ 0.93
CCHCR1-228ENST00000509552 UBN2Q6ZU65 1347 aa20.83■□□□□ 0.92
CCHCR1-228ENST00000509552 TCRBV5S4A2TA0A5A2 114 aa20.83■□□□□ 0.92
CCHCR1-228ENST00000509552 KIF28PB7ZC32 967 aa20.83■□□□□ 0.92
CCHCR1-228ENST00000509552 AOPEPQ8N6M6 819 aa20.83■□□□□ 0.92
CCHCR1-228ENST00000509552 CACTINQ8WUQ7 758 aaKnown RBP20.83■□□□□ 0.92
CCHCR1-228ENST00000509552 STRBPQ96SI9 672 aaKnown RBP20.83■□□□□ 0.92
CCHCR1-228ENST00000509552 NUP98P52948 1817 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 B4E1Z4 1266 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 FGFR2P21802 821 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 MAP3K12Q12852 859 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 ALX1Q15699 326 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 CCDC144BQ3MJ40 725 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 APOA5Q6Q788 366 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 NFXL1Q6ZNB6 911 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 CCDC144CPQ8IYA2 1237 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 SPATA5Q8NB90 893 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 C4AP0C0L4 1744 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 C4BP0C0L5 1744 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 KAT6BQ8WYB5 2073 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 GNL2Q13823 731 aaKnown RBP20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 HELBQ8NG08 1087 aaPredicted RBP20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 ERCC4Q92889 916 aaPredicted RBP20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 DENND2AQ9ULE3 1009 aa20.82■□□□□ 0.92
CCHCR1-228ENST00000509552 A0A087WWV3 80 aa20.81■□□□□ 0.92
CCHCR1-228ENST00000509552 PATL2C9JE40 543 aaKnown RBP20.81■□□□□ 0.92
CCHCR1-228ENST00000509552 ZBTB43O43298 467 aa20.81■□□□□ 0.92
CCHCR1-228ENST00000509552 CMA1P23946 247 aa20.81■□□□□ 0.92
CCHCR1-228ENST00000509552 LRRC8AQ8IWT6 810 aa20.81■□□□□ 0.92
CCHCR1-228ENST00000509552 FBXW7Q969H0 707 aa20.81■□□□□ 0.92
CCHCR1-228ENST00000509552 MPHOSPH8Q99549 860 aa20.81■□□□□ 0.92
CCHCR1-228ENST00000509552 ZNF202O95125 648 aa20.8■□□□□ 0.92
CCHCR1-228ENST00000509552 SLC3A2P08195 630 aaKnown RBP20.8■□□□□ 0.92
CCHCR1-228ENST00000509552 PRKCSHP14314 528 aaPredicted RBP20.8■□□□□ 0.92
CCHCR1-228ENST00000509552 TRIM29Q14134 588 aa20.8■□□□□ 0.92
CCHCR1-228ENST00000509552 SLC39A14Q15043 492 aa20.8■□□□□ 0.92
CCHCR1-228ENST00000509552 MICU3Q86XE3 530 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms