RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 AKAP2Q9Y2D5 859 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 ERBB3P21860 1342 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 RGPD8O14715 1765 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 hCG_1642624A0A1W2PR95 340 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 KRT10P13645 584 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 C1QBPQ07021 282 aaKnown RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 BICDL1Q6ZP65 573 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 JAZF1Q86VZ6 243 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 THEMISQ8N1K5 641 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 CCDC24Q8N4L8 307 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 UCMAQ8WVF2 138 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 MKL2Q9ULH7 1088 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 DOLKQ9UPQ8 538 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 MAGED1Q9Y5V3 778 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 MRFAP1Q9Y605 127 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 ALS2Q96Q42 1657 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 N4BP2Q86UW6 1770 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 CALD1Q05682 793 aaKnown RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 SMC1AQ14683 1233 aaKnown RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 CFAP100Q494V2 611 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 SNAP47Q5SQN1 464 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 TEX11Q8IYF3 940 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 GTPBP4Q9BZE4 634 aaKnown RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 ZIM2Q9NZV7 527 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 CGNQ9P2M7 1197 aaKnown RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 TTLL3Q9Y4R7 772 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 DCCP43146 1447 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 LRRC37A3O60309 1634 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 FAM86C2PA6NEL3 165 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 NR1I2O75469 434 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 SETSIPP0DME0 302 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 TNNT1P13805 278 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 CTNNA1P35221 906 aaKnown RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 NR6A1Q15406 480 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 TCEA2Q15560 299 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 ELF2Q15723 593 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 SPECC1Q5M775 1068 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 OLFM4Q6UX06 510 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 ZSCAN30Q86W11 494 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 SKAP1Q86WV1 359 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 NPAS4Q8IUM7 802 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 CCAR2Q8N163 923 aaKnown RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 EIF2AK1Q9BQI3 630 aaKnown RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 CSRNP2Q9H175 543 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 IP6K2Q9UHH9 426 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 ZNF180Q9UJW8 692 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 PPP1R12BO60237 982 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 LDHCP07864 332 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 SSRP1Q08945 709 aaKnown RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 FBXO31Q5XUX0 539 aaPredicted RBP4.55□□□□□ -1.68
NEDD4-209ENST00000508871 C4orf50Q6ZRC1 276 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 GPRASP2Q96D09 838 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 CEP63Q96MT8 703 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 TBX22Q9Y458 520 aa4.55□□□□□ -1.68
NEDD4-209ENST00000508871 TBX3O15119 743 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 APOA4P06727 396 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 MTMR2Q13614 643 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 MED1Q15648 1581 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 CCDC102BQ68D86 513 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 DSTYKQ6XUX3 929 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 PTPRUQ92729 1446 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 PPIP5K1Q6PFW1 1433 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 KIF24Q5T7B8 1368 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 H0YC42 278 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 TIMM44O43615 452 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 RASGRP1O95267 797 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 PSMA4P25789 261 aaKnown RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 PPP2R1AP30153 589 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 GYS2P54840 703 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 GTF2IP78347 998 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 HSP90AB3PQ58FF7 597 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 RPAP2Q8IXW5 612 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 SMC3Q9UQE7 1217 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 RRP7AQ9Y3A4 280 aaKnown RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 PCDHB15Q9Y5E8 787 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 LTN1O94822 1766 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 A0A1W2PP64 1363 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 PLEKHG2Q9H7P9 1386 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 KIF5CO60282 957 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 EVI5O60447 810 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 PDGFRBP09619 1106 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 ODF2Q5BJF6 829 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 GSDMBQ8TAX9 411 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 L3MBTL3Q96JM7 780 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 SIL1Q9H173 461 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 GPHNQ9NQX3 736 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 XIRP1Q702N8 1843 aaKnown RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 TMEM127O75204 238 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 ASMTLO95671 621 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 APOBRQ0VD83 1088 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 FKBP5Q13451 457 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 HSP90AA5PQ58FG0 334 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 METTL24Q5JXM2 366 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 ITPRIPL1Q6GPH6 555 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 SLC7A3Q8WY07 619 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 PNNQ9H307 717 aaKnown RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 CALCOCO1Q9P1Z2 691 aa4.54□□□□□ -1.68
NEDD4-209ENST00000508871 NPHP4O75161 1426 aaPredicted RBP4.54□□□□□ -1.68
NEDD4-209ENST00000508871 METP08581 1390 aa4.53□□□□□ -1.68
NEDD4-209ENST00000508871 RNF123Q5XPI4 1314 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms