RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 GGNBP2Q9H3C7 697 aa6.83□□□□□ -1.32
CLDND1-212ENST00000506885 RNF19AQ9NV58 838 aa6.83□□□□□ -1.32
CLDND1-212ENST00000506885 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 STK10O94804 968 aaKnown RBP6.82□□□□□ -1.32
CLDND1-212ENST00000506885 PARNO95453 639 aaKnown RBP6.82□□□□□ -1.32
CLDND1-212ENST00000506885 ATP2B2Q01814 1243 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 PLCB3Q01970 1234 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 GRIK4Q16099 956 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 CEP135Q66GS9 1140 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 GDF6Q6KF10 455 aaPredicted RBP6.82□□□□□ -1.32
CLDND1-212ENST00000506885 IGF2-ASQ6U949 168 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 TMC1Q8TDI8 760 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 SNX29Q8TEQ0 813 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 CITED4Q96RK1 184 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 PBX4Q9BYU1 374 aa6.82□□□□□ -1.32
CLDND1-212ENST00000506885 FZD6O60353 706 aa6.81□□□□□ -1.32
CLDND1-212ENST00000506885 PHACTR2O75167 634 aa6.81□□□□□ -1.32
CLDND1-212ENST00000506885 FAM117BQ6P1L5 589 aa6.81□□□□□ -1.32
CLDND1-212ENST00000506885 EXOC8Q8IYI6 725 aa6.81□□□□□ -1.32
CLDND1-212ENST00000506885 GJD3Q8N144 294 aa6.81□□□□□ -1.32
CLDND1-212ENST00000506885 CEP120Q8N960 986 aa6.81□□□□□ -1.32
CLDND1-212ENST00000506885 DMRTB1Q96MA1 342 aa6.81□□□□□ -1.32
CLDND1-212ENST00000506885 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
CLDND1-212ENST00000506885 SALL4Q9UJQ4 1053 aa6.81□□□□□ -1.32
CLDND1-212ENST00000506885 MRPL42Q9Y6G3 142 aaKnown RBP6.81□□□□□ -1.32
CLDND1-212ENST00000506885 TNFRSF21O75509 655 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 EDN3P14138 238 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 PTPRAP18433 802 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 CDC27P30260 824 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 COL13A1Q5TAT6 717 aaPredicted RBP6.8□□□□□ -1.32
CLDND1-212ENST00000506885 C1orf127Q8N9H9 656 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 PRDM16Q9HAZ2 1276 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 ZFP64Q9NPA5 681 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 CNTN3Q9P232 1028 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 USP21Q9UK80 565 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 WWC3Q9ULE0 1092 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 COL4A3BPQ9Y5P4 624 aa6.8□□□□□ -1.32
CLDND1-212ENST00000506885 CYP2E1P05181 493 aaPredicted RBP6.79□□□□□ -1.32
CLDND1-212ENST00000506885 SELPP16109 830 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 CABP4P57796 275 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 ADGRE1Q14246 886 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 NFE2L2Q16236 605 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 HSP90AB2PQ58FF8 381 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 VPS37DQ86XT2 251 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 MCF2L2Q86YR7 1114 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 ZNF654Q8IZM8 581 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 MRFAP1L1Q96HT8 127 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 RASSF4Q9H2L5 321 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 TRIM33Q9UPN9 1127 aa6.79□□□□□ -1.32
CLDND1-212ENST00000506885 YBX3P16989 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
CLDND1-212ENST00000506885 ATP11AP98196 1134 aa6.78□□□□□ -1.32
CLDND1-212ENST00000506885 TXNRD3Q86VQ6 643 aa6.78□□□□□ -1.32
CLDND1-212ENST00000506885 ADAM19Q9H013 955 aa6.78□□□□□ -1.32
CLDND1-212ENST00000506885 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
CLDND1-212ENST00000506885 KANSL3Q9P2N6 904 aa6.78□□□□□ -1.32
CLDND1-212ENST00000506885 DDX41Q9UJV9 622 aaKnown RBP6.78□□□□□ -1.32
CLDND1-212ENST00000506885 A6NHS1 94 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
CLDND1-212ENST00000506885 FGRP09769 529 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 XRCC5P13010 732 aaKnown RBP6.77□□□□□ -1.33
CLDND1-212ENST00000506885 MBTPS1Q14703 1052 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 ZNF394Q53GI3 561 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 WNT8BQ93098 351 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 SETDB2Q96T68 719 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 MRPL18Q9H0U6 180 aaKnown RBP6.77□□□□□ -1.33
CLDND1-212ENST00000506885 CHRDQ9H2X0 955 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 PCDH12Q9NPG4 1184 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 BCCIPQ9P287 314 aaKnown RBP eCLIP6.77□□□□□ -1.33
CLDND1-212ENST00000506885 CHPF2Q9P2E5 772 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 MAGEC2Q9UBF1 373 aaPredicted RBP6.77□□□□□ -1.33
CLDND1-212ENST00000506885 PCDHGB7Q9Y5F8 929 aa6.77□□□□□ -1.33
CLDND1-212ENST00000506885 PDE2AO00408 941 aaPredicted RBP6.76□□□□□ -1.33
CLDND1-212ENST00000506885 DLL1O00548 723 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 GPR182O15218 404 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 DEAF1O75398 565 aaPredicted RBP6.76□□□□□ -1.33
CLDND1-212ENST00000506885 MAP4K4O95819 1239 aaPredicted RBP6.76□□□□□ -1.33
CLDND1-212ENST00000506885 IGHA2P01877 340 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 RACK1P63244 317 aaKnown RBP6.76□□□□□ -1.33
CLDND1-212ENST00000506885 RSPO4Q2I0M5 234 aaPredicted RBP6.76□□□□□ -1.33
CLDND1-212ENST00000506885 FILIP1Q7Z7B0 1213 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 TMEM130Q8N3G9 435 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 TMEM102Q8N9M5 508 aaPredicted RBP6.76□□□□□ -1.33
CLDND1-212ENST00000506885 KLHL23Q8NBE8 558 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 MORC4Q8TE76 937 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 CRELD1Q96HD1 420 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 FAM129BQ96TA1 746 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.76□□□□□ -1.33
CLDND1-212ENST00000506885 KRTAP4-2Q9BYR5 136 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 LACRTQ9GZZ8 138 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 ZFYVE28Q9HCC9 887 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 DZANK1Q9NVP4 752 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 IFT57Q9NWB7 429 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 FAN1Q9Y2M0 1017 aa6.76□□□□□ -1.33
CLDND1-212ENST00000506885 PEX14O75381 377 aa6.75□□□□□ -1.33
CLDND1-212ENST00000506885 GNA15P30679 374 aa6.75□□□□□ -1.33
CLDND1-212ENST00000506885 SETDB1Q15047 1291 aa6.75□□□□□ -1.33
CLDND1-212ENST00000506885 ALG1LQ6GMV1 187 aa6.75□□□□□ -1.33
CLDND1-212ENST00000506885 SHISA2Q6UWI4 295 aa6.75□□□□□ -1.33
CLDND1-212ENST00000506885 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
CLDND1-212ENST00000506885 ALKBH8Q96BT7 664 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms