RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 PI16Q6UXB8 463 aa7.66□□□□□ -1.18
LINC00616-202ENST00000505874 SLC51AQ86UW1 340 aa7.66□□□□□ -1.18
LINC00616-202ENST00000505874 CLEC10AQ8IUN9 316 aa7.66□□□□□ -1.18
LINC00616-202ENST00000505874 SMG8Q8ND04 991 aaKnown RBP7.66□□□□□ -1.18
LINC00616-202ENST00000505874 FAM83CQ9BQN1 747 aa7.66□□□□□ -1.18
LINC00616-202ENST00000505874 SUGCTQ9HAC7 445 aa7.66□□□□□ -1.18
LINC00616-202ENST00000505874 TMEM238LA0A1B0GVL6 79 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 TIAF1O95411 115 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 ECEL1O95672 775 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 TGFB1P01137 390 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 CYP11A1P05108 521 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 MAP4P27816 1152 aaKnown RBP7.65□□□□□ -1.18
LINC00616-202ENST00000505874 SSTR4P31391 388 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 GRM2Q14416 872 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 POU4F3Q15319 338 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 RNF43Q68DV7 783 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 PRPF40BQ6NWY9 871 aaKnown RBP7.65□□□□□ -1.18
LINC00616-202ENST00000505874 NBPF11Q86T75 865 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 DDX54Q8TDD1 881 aaKnown RBP7.65□□□□□ -1.18
LINC00616-202ENST00000505874 TRIM56Q9BRZ2 755 aaKnown RBP7.65□□□□□ -1.18
LINC00616-202ENST00000505874 HIF3AQ9Y2N7 669 aa7.65□□□□□ -1.18
LINC00616-202ENST00000505874 EIF4EBP3O60516 100 aaPredicted RBP7.64□□□□□ -1.19
LINC00616-202ENST00000505874 ZNF157P51786 506 aaPredicted RBP7.64□□□□□ -1.19
LINC00616-202ENST00000505874 GLIS3Q8NEA6 775 aa7.64□□□□□ -1.19
LINC00616-202ENST00000505874 NLRP2Q9NX02 1062 aa7.64□□□□□ -1.19
LINC00616-202ENST00000505874 TRAK1Q9UPV9 953 aa7.64□□□□□ -1.19
LINC00616-202ENST00000505874 PNMA6FA0A0J9YX94 578 aa7.63□□□□□ -1.19
LINC00616-202ENST00000505874 TREHO43280 583 aa7.63□□□□□ -1.19
LINC00616-202ENST00000505874 USP11P51784 963 aa7.63□□□□□ -1.19
LINC00616-202ENST00000505874 PLCB3Q01970 1234 aa7.63□□□□□ -1.19
LINC00616-202ENST00000505874 SOX4Q06945 474 aaPredicted RBP7.63□□□□□ -1.19
LINC00616-202ENST00000505874 DSC3Q14574 896 aa7.63□□□□□ -1.19
LINC00616-202ENST00000505874 ZDHHC13Q8IUH4 622 aa7.63□□□□□ -1.19
LINC00616-202ENST00000505874 DBNDD2Q9BQY9 259 aa7.63□□□□□ -1.19
LINC00616-202ENST00000505874 CORO1BQ9BR76 489 aa7.63□□□□□ -1.19
LINC00616-202ENST00000505874 FCGRTP55899 365 aa7.62□□□□□ -1.19
LINC00616-202ENST00000505874 PTPN12Q05209 780 aaKnown RBP7.62□□□□□ -1.19
LINC00616-202ENST00000505874 KCNA1Q09470 495 aa7.62□□□□□ -1.19
LINC00616-202ENST00000505874 FAAP100Q0VG06 881 aa7.62□□□□□ -1.19
LINC00616-202ENST00000505874 C2CD4AQ8NCU7 369 aaPredicted RBP7.62□□□□□ -1.19
LINC00616-202ENST00000505874 FBLIM1Q8WUP2 373 aa7.62□□□□□ -1.19
LINC00616-202ENST00000505874 RAD18Q9NS91 495 aa7.62□□□□□ -1.19
LINC00616-202ENST00000505874 PCMTD2Q9NV79 361 aa7.62□□□□□ -1.19
LINC00616-202ENST00000505874 ADH5P11766 374 aa7.61□□□□□ -1.19
LINC00616-202ENST00000505874 PDE3AQ14432 1141 aa7.61□□□□□ -1.19
LINC00616-202ENST00000505874 ENOX2Q16206 610 aaKnown RBP7.61□□□□□ -1.19
LINC00616-202ENST00000505874 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.61□□□□□ -1.19
LINC00616-202ENST00000505874 AKAP4Q5JQC9 854 aa7.61□□□□□ -1.19
LINC00616-202ENST00000505874 CDPF1Q6NVV7 123 aa7.61□□□□□ -1.19
LINC00616-202ENST00000505874 DTHD1Q6ZMT9 781 aa7.61□□□□□ -1.19
LINC00616-202ENST00000505874 SHKBP1Q8TBC3 707 aa7.61□□□□□ -1.19
LINC00616-202ENST00000505874 MFSD14AQ96MC6 490 aa7.61□□□□□ -1.19
LINC00616-202ENST00000505874 BCO2Q9BYV7 579 aa7.61□□□□□ -1.19
LINC00616-202ENST00000505874 FAM95CA0A1B0GW59 222 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 WDR64B1ANS9 1081 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 MED26O95402 600 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 MAPK8P45983 427 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 CD97P48960 835 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 AP3B2Q13367 1082 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 NFKBIBQ15653 356 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 RPS26P11Q5JNZ5 115 aaPredicted RBP7.6□□□□□ -1.19
LINC00616-202ENST00000505874 HP1BP3Q5SSJ5 553 aaPredicted RBP7.6□□□□□ -1.19
LINC00616-202ENST00000505874 FBXL6Q8N531 539 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 ZC3H12CQ9C0D7 883 aaKnown RBP7.6□□□□□ -1.19
LINC00616-202ENST00000505874 ZFYVE1Q9HBF4 777 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 AP4E1Q9UPM8 1137 aa7.6□□□□□ -1.19
LINC00616-202ENST00000505874 COBLO75128 1261 aa7.59□□□□□ -1.19
LINC00616-202ENST00000505874 RAB6AP20340 208 aa7.59□□□□□ -1.19
LINC00616-202ENST00000505874 PAOXQ6QHF9 649 aa7.59□□□□□ -1.19
LINC00616-202ENST00000505874 NXPE4Q6UWF7 544 aa7.59□□□□□ -1.19
LINC00616-202ENST00000505874 DYMQ7RTS9 669 aa7.59□□□□□ -1.19
LINC00616-202ENST00000505874 ZSCAN29Q8IWY8 852 aaPredicted RBP7.59□□□□□ -1.19
LINC00616-202ENST00000505874 SETDB2Q96T68 719 aa7.59□□□□□ -1.19
LINC00616-202ENST00000505874 PPP4R2Q9NY27 417 aa7.59□□□□□ -1.19
LINC00616-202ENST00000505874 GPN3Q9UHW5 284 aaPredicted RBP7.59□□□□□ -1.19
LINC00616-202ENST00000505874 ACTL7BQ9Y614 415 aa7.59□□□□□ -1.19
LINC00616-202ENST00000505874 PRR19A6NJB7 356 aa7.58□□□□□ -1.2
LINC00616-202ENST00000505874 TRAIPQ9BWF2 469 aa7.58□□□□□ -1.2
LINC00616-202ENST00000505874 AOC2O75106 756 aa7.57□□□□□ -1.2
LINC00616-202ENST00000505874 WDR18Q9BV38 432 aa7.57□□□□□ -1.2
LINC00616-202ENST00000505874 YIPF2Q9BWQ6 316 aa7.57□□□□□ -1.2
LINC00616-202ENST00000505874 FAM105AQ9NUU6 356 aa7.57□□□□□ -1.2
LINC00616-202ENST00000505874 AKAP2Q9Y2D5 859 aa7.57□□□□□ -1.2
LINC00616-202ENST00000505874 NFICP08651 508 aa7.56□□□□□ -1.2
LINC00616-202ENST00000505874 LIG1P18858 919 aa7.56□□□□□ -1.2
LINC00616-202ENST00000505874 GRIK1P39086 918 aa7.56□□□□□ -1.2
LINC00616-202ENST00000505874 PPP2R3AQ06190 1150 aa7.56□□□□□ -1.2
LINC00616-202ENST00000505874 SHISA5Q8N114 240 aa7.56□□□□□ -1.2
LINC00616-202ENST00000505874 ASB16Q96NS5 453 aa7.56□□□□□ -1.2
LINC00616-202ENST00000505874 CCDC86Q9H6F5 360 aaKnown RBP7.56□□□□□ -1.2
LINC00616-202ENST00000505874 ATG3Q9NT62 314 aa7.56□□□□□ -1.2
LINC00616-202ENST00000505874 TMEM39AQ9NV64 488 aa7.56□□□□□ -1.2
LINC00616-202ENST00000505874 F13BP05160 661 aa7.55□□□□□ -1.2
LINC00616-202ENST00000505874 XRCC5P13010 732 aaKnown RBP7.55□□□□□ -1.2
LINC00616-202ENST00000505874 ASPAP45381 313 aa7.55□□□□□ -1.2
LINC00616-202ENST00000505874 FMR1Q06787 632 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00616-202ENST00000505874 GIMAP7Q8NHV1 300 aa7.55□□□□□ -1.2
LINC00616-202ENST00000505874 EZH1Q92800 747 aaPredicted RBP7.55□□□□□ -1.2
LINC00616-202ENST00000505874 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
LINC00616-202ENST00000505874 WWC3Q9ULE0 1092 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms