RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 NEUROD4Q9HD90 331 aa8.22□□□□□ -1.09
RFC1-204ENST00000502706 ADGRL1O94910 1474 aa8.21□□□□□ -1.09
RFC1-204ENST00000502706 TNFRSF10BO14763 440 aa8.21□□□□□ -1.1
RFC1-204ENST00000502706 PARNO95453 639 aaKnown RBP8.21□□□□□ -1.1
RFC1-204ENST00000502706 SPEM2Q0P670 501 aa8.21□□□□□ -1.1
RFC1-204ENST00000502706 SFSWAPQ12872 951 aaKnown RBP8.21□□□□□ -1.1
RFC1-204ENST00000502706 COX20Q5RI15 118 aa8.21□□□□□ -1.1
RFC1-204ENST00000502706 GJD3Q8N144 294 aa8.21□□□□□ -1.1
RFC1-204ENST00000502706 SSBP4Q9BWG4 385 aaPredicted RBP8.21□□□□□ -1.1
RFC1-204ENST00000502706 IFT57Q9NWB7 429 aa8.21□□□□□ -1.1
RFC1-204ENST00000502706 SLC52A1Q9NWF4 448 aa8.21□□□□□ -1.1
RFC1-204ENST00000502706 UACAQ9BZF9 1416 aa8.2□□□□□ -1.1
RFC1-204ENST00000502706 HECW2Q9P2P5 1572 aa8.2□□□□□ -1.1
RFC1-204ENST00000502706 ENPP3O14638 875 aa8.2□□□□□ -1.1
RFC1-204ENST00000502706 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
RFC1-204ENST00000502706 DNAJC6O75061 913 aa8.2□□□□□ -1.1
RFC1-204ENST00000502706 MKL1Q969V6 931 aa8.2□□□□□ -1.1
RFC1-204ENST00000502706 CSRNP1Q96S65 589 aa8.2□□□□□ -1.1
RFC1-204ENST00000502706 TSPAN10Q9H1Z9 355 aaPredicted RBP8.2□□□□□ -1.1
RFC1-204ENST00000502706 PCDH12Q9NPG4 1184 aa8.2□□□□□ -1.1
RFC1-204ENST00000502706 RNF112Q9ULX5 631 aa8.2□□□□□ -1.1
RFC1-204ENST00000502706 MAP3K4Q9Y6R4 1608 aa8.2□□□□□ -1.1
RFC1-204ENST00000502706 TEX14Q8IWB6 1497 aa8.19□□□□□ -1.1
RFC1-204ENST00000502706 EML1O00423 815 aa8.19□□□□□ -1.1
RFC1-204ENST00000502706 PPP1R12AO14974 1030 aaPredicted RBP8.19□□□□□ -1.1
RFC1-204ENST00000502706 MZF1P28698 734 aaPredicted RBP8.19□□□□□ -1.1
RFC1-204ENST00000502706 PAK2Q13177 524 aa8.19□□□□□ -1.1
RFC1-204ENST00000502706 ZDHHC1Q8WTX9 485 aa8.19□□□□□ -1.1
RFC1-204ENST00000502706 L3MBTL2Q969R5 705 aa8.19□□□□□ -1.1
RFC1-204ENST00000502706 GPRASP2Q96D09 838 aa8.19□□□□□ -1.1
RFC1-204ENST00000502706 SPC25Q9HBM1 224 aa8.19□□□□□ -1.1
RFC1-204ENST00000502706 POLIQ9UNA4 740 aa8.19□□□□□ -1.1
RFC1-204ENST00000502706 EPRSP07814 1512 aaKnown RBP8.19□□□□□ -1.1
RFC1-204ENST00000502706 DISP1Q96F81 1524 aa8.19□□□□□ -1.1
RFC1-204ENST00000502706 PAX4O43316 350 aa8.18□□□□□ -1.1
RFC1-204ENST00000502706 NEFLP07196 543 aa8.18□□□□□ -1.1
RFC1-204ENST00000502706 TEAD4Q15561 434 aa8.18□□□□□ -1.1
RFC1-204ENST00000502706 SHISA2Q6UWI4 295 aa8.18□□□□□ -1.1
RFC1-204ENST00000502706 ATCAYQ86WG3 371 aa8.18□□□□□ -1.1
RFC1-204ENST00000502706 STAG2Q8N3U4 1231 aa8.18□□□□□ -1.1
RFC1-204ENST00000502706 SCHIP1Q9P0W5 487 aaPredicted RBP8.18□□□□□ -1.1
RFC1-204ENST00000502706 MAGEC2Q9UBF1 373 aaPredicted RBP8.18□□□□□ -1.1
RFC1-204ENST00000502706 KDM5BQ9UGL1 1544 aa8.18□□□□□ -1.1
RFC1-204ENST00000502706 ZCCHC11Q5TAX3 1644 aaKnown RBP8.18□□□□□ -1.1
RFC1-204ENST00000502706 TXKP42681 527 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 DNM1Q05193 864 aaKnown RBP8.17□□□□□ -1.1
RFC1-204ENST00000502706 SERINC3Q13530 473 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 EXOC8Q8IYI6 725 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 C7orf43Q8WVR3 580 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 TMX1Q9H3N1 280 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 CHPF2Q9P2E5 772 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 USP21Q9UK80 565 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 LMTK3Q96Q04 1460 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 COL17A1Q9UMD9 1497 aaPredicted RBP8.17□□□□□ -1.1
RFC1-204ENST00000502706 UGGT2Q9NYU1 1516 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 KIAA0556O60303 1618 aa8.17□□□□□ -1.1
RFC1-204ENST00000502706 EIF1AYO14602 144 aaKnown RBP8.16□□□□□ -1.1
RFC1-204ENST00000502706 ZBTB39O15060 712 aa8.16□□□□□ -1.1
RFC1-204ENST00000502706 SSBP05455 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
RFC1-204ENST00000502706 NOS2P35228 1153 aa8.16□□□□□ -1.1
RFC1-204ENST00000502706 EPHA4P54764 986 aa8.16□□□□□ -1.1
RFC1-204ENST00000502706 USP31Q70CQ4 1352 aa8.16□□□□□ -1.1
RFC1-204ENST00000502706 RAB44Q7Z6P3 723 aaPredicted RBP8.16□□□□□ -1.1
RFC1-204ENST00000502706 C2orf49Q9BVC5 232 aaPredicted RBP8.16□□□□□ -1.1
RFC1-204ENST00000502706 SLKQ9H2G2 1235 aaPredicted RBP8.16□□□□□ -1.1
RFC1-204ENST00000502706 SIRPGQ9P1W8 387 aa8.16□□□□□ -1.1
RFC1-204ENST00000502706 PRKAB1Q9Y478 270 aa8.16□□□□□ -1.1
RFC1-204ENST00000502706 RAPGEF2Q9Y4G8 1499 aa8.15□□□□□ -1.1
RFC1-204ENST00000502706 PCSK2P16519 638 aa8.15□□□□□ -1.1
RFC1-204ENST00000502706 KCNQ4P56696 695 aa8.15□□□□□ -1.1
RFC1-204ENST00000502706 PLEKHG6Q3KR16 790 aa8.15□□□□□ -1.1
RFC1-204ENST00000502706 FMR1NBQ8N0W7 255 aaPredicted RBP8.15□□□□□ -1.1
RFC1-204ENST00000502706 MYO19Q96H55 970 aa8.15□□□□□ -1.1
RFC1-204ENST00000502706 SRPK1Q96SB4 655 aaKnown RBP8.15□□□□□ -1.1
RFC1-204ENST00000502706 DNAJC25Q9H1X3 360 aa8.15□□□□□ -1.1
RFC1-204ENST00000502706 FAN1Q9Y2M0 1017 aa8.15□□□□□ -1.1
RFC1-204ENST00000502706 WDR7Q9Y4E6 1490 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 GIPC1O14908 333 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 U2SURPO15042 1029 aaKnown RBP8.14□□□□□ -1.11
RFC1-204ENST00000502706 COBLO75128 1261 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 TAF1CQ15572 869 aaPredicted RBP8.14□□□□□ -1.11
RFC1-204ENST00000502706 PLEKHG4Q58EX7 1191 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 MORC4Q8TE76 937 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 EDEM1Q92611 657 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 SEC16BQ96JE7 1060 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 RNPC3Q96LT9 517 aaKnown RBP8.14□□□□□ -1.11
RFC1-204ENST00000502706 IRF2BPLQ9H1B7 796 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 QTRT2Q9H974 415 aaKnown RBP8.14□□□□□ -1.11
RFC1-204ENST00000502706 JPH1Q9HDC5 661 aaPredicted RBP8.14□□□□□ -1.11
RFC1-204ENST00000502706 BRD7Q9NPI1 651 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 CHMP3Q9Y3E7 222 aa8.14□□□□□ -1.11
RFC1-204ENST00000502706 MAP4K4O95819 1239 aaPredicted RBP8.13□□□□□ -1.11
RFC1-204ENST00000502706 PDGFAP04085 211 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 S100BP04271 92 aaPredicted RBP8.13□□□□□ -1.11
RFC1-204ENST00000502706 YBX3P16989 372 aaKnown RBP eCLIP8.13□□□□□ -1.11
RFC1-204ENST00000502706 ORC1Q13415 861 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 TTC16Q8NEE8 873 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 RHPN1Q8TCX5 695 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 RASGRP4Q8TDF6 673 aa8.13□□□□□ -1.11
RFC1-204ENST00000502706 FMNL2Q96PY5 1086 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms