RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 ZNF853P0CG23 659 aa10.32□□□□□ -0.76
PUDP-205ENST00000498474 BMP1P13497 986 aa10.32□□□□□ -0.76
PUDP-205ENST00000498474 IARSP41252 1262 aaKnown RBP10.32□□□□□ -0.76
PUDP-205ENST00000498474 NFX1Q12986 1120 aaKnown RBP10.32□□□□□ -0.76
PUDP-205ENST00000498474 TCIRG1Q13488 830 aa10.32□□□□□ -0.76
PUDP-205ENST00000498474 RIC3Q7Z5B4 369 aa10.32□□□□□ -0.76
PUDP-205ENST00000498474 NLRP10Q86W26 655 aa10.32□□□□□ -0.76
PUDP-205ENST00000498474 ZNF511Q8NB15 262 aa10.32□□□□□ -0.76
PUDP-205ENST00000498474 SMC1BQ8NDV3 1235 aa10.32□□□□□ -0.76
PUDP-205ENST00000498474 RBM17Q96I25 401 aaKnown RBP10.32□□□□□ -0.76
PUDP-205ENST00000498474 WASF2Q9Y6W5 498 aa10.32□□□□□ -0.76
PUDP-205ENST00000498474 DDX60Q8IY21 1712 aaKnown RBP10.31□□□□□ -0.76
PUDP-205ENST00000498474 HOXA10P31260 410 aaPredicted RBP10.31□□□□□ -0.76
PUDP-205ENST00000498474 CTHP32929 405 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 GJA5P36382 358 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 PARP10Q53GL7 1025 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 LCE2CQ5TA81 110 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 LYPD8Q6UX82 237 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 RTKN2Q8IZC4 609 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 C8orf58Q8NAV2 365 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 NLRP3Q96P20 1036 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 PHAXQ9H814 394 aaKnown RBP10.31□□□□□ -0.76
PUDP-205ENST00000498474 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
PUDP-205ENST00000498474 COL4A1P02462 1669 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 ABCC4O15439 1325 aa10.31□□□□□ -0.76
PUDP-205ENST00000498474 IBTKQ9P2D0 1353 aaPredicted RBP10.3□□□□□ -0.76
PUDP-205ENST00000498474 PDE4DQ08499 809 aa10.3□□□□□ -0.76
PUDP-205ENST00000498474 SLC10A5Q5PT55 438 aa10.3□□□□□ -0.76
PUDP-205ENST00000498474 TSPYL6Q8N831 410 aa10.3□□□□□ -0.76
PUDP-205ENST00000498474 JARID2Q92833 1246 aaPredicted RBP10.3□□□□□ -0.76
PUDP-205ENST00000498474 TSR2Q969E8 191 aaKnown RBP10.3□□□□□ -0.76
PUDP-205ENST00000498474 FAM89AQ96GI7 184 aa10.3□□□□□ -0.76
PUDP-205ENST00000498474 SLC24A3Q9HC58 644 aa10.3□□□□□ -0.76
PUDP-205ENST00000498474 SENP2Q9HC62 589 aa10.3□□□□□ -0.76
PUDP-205ENST00000498474 MAP10Q9P2G4 905 aa10.3□□□□□ -0.76
PUDP-205ENST00000498474 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
PUDP-205ENST00000498474 RNF123Q5XPI4 1314 aa10.3□□□□□ -0.76
PUDP-205ENST00000498474 SCN4AP35499 1836 aa10.29□□□□□ -0.76
PUDP-205ENST00000498474 DIXDC1Q155Q3 683 aa10.29□□□□□ -0.76
PUDP-205ENST00000498474 EAPPQ56P03 285 aaPredicted RBP10.29□□□□□ -0.76
PUDP-205ENST00000498474 TRIM46Q7Z4K8 759 aa10.29□□□□□ -0.76
PUDP-205ENST00000498474 KLRG1Q96E93 195 aa10.29□□□□□ -0.76
PUDP-205ENST00000498474 CRAMP1Q96RY5 1269 aa10.29□□□□□ -0.76
PUDP-205ENST00000498474 TAF1DQ9H5J8 278 aaPredicted RBP10.29□□□□□ -0.76
PUDP-205ENST00000498474 IFT57Q9NWB7 429 aa10.29□□□□□ -0.76
PUDP-205ENST00000498474 DBF4Q9UBU7 674 aaPredicted RBP10.29□□□□□ -0.76
PUDP-205ENST00000498474 GJA3Q9Y6H8 435 aa10.29□□□□□ -0.76
PUDP-205ENST00000498474 RIC1Q4ADV7 1423 aa10.29□□□□□ -0.76
PUDP-205ENST00000498474 LTBP1Q14766 1721 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 FZD9O00144 591 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 CAPN5O15484 640 aaPredicted RBP10.28□□□□□ -0.76
PUDP-205ENST00000498474 GNAI1P63096 354 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 AOC3Q16853 763 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 HSP90AB3PQ58FF7 597 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 LARGE2Q8N3Y3 721 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 PLBD2Q8NHP8 589 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 PSMD1Q99460 953 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 ISCA1Q9BUE6 129 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 SH3TC1Q8TE82 1336 aa10.28□□□□□ -0.76
PUDP-205ENST00000498474 PPIP5K2O43314 1243 aa10.27□□□□□ -0.77
PUDP-205ENST00000498474 HOXB7P09629 217 aa10.27□□□□□ -0.77
PUDP-205ENST00000498474 QPCTQ16769 361 aa10.27□□□□□ -0.77
PUDP-205ENST00000498474 MYSM1Q5VVJ2 828 aa10.27□□□□□ -0.77
PUDP-205ENST00000498474 JDP2Q8WYK2 163 aa10.27□□□□□ -0.77
PUDP-205ENST00000498474 FOXJ1Q92949 421 aa10.27□□□□□ -0.77
PUDP-205ENST00000498474 MYD88Q99836 296 aa10.27□□□□□ -0.77
PUDP-205ENST00000498474 HYPKQ9NX55 129 aa10.27□□□□□ -0.77
PUDP-205ENST00000498474 ATP6V0A2Q9Y487 856 aa10.27□□□□□ -0.77
PUDP-205ENST00000498474 EPHX2P34913 555 aa10.26□□□□□ -0.77
PUDP-205ENST00000498474 EIF6P56537 245 aaKnown RBP10.26□□□□□ -0.77
PUDP-205ENST00000498474 FMR1Q06787 632 aaKnown RBP eCLIP10.26□□□□□ -0.77
PUDP-205ENST00000498474 MAP1SQ66K74 1059 aaPredicted RBP10.26□□□□□ -0.77
PUDP-205ENST00000498474 CC2D2BQ6DHV5 1058 aa10.26□□□□□ -0.77
PUDP-205ENST00000498474 DDX46Q7L014 1031 aaKnown RBP10.26□□□□□ -0.77
PUDP-205ENST00000498474 CELF1Q92879 486 aaKnown RBP10.26□□□□□ -0.77
PUDP-205ENST00000498474 GPR101Q96P66 508 aaPredicted RBP10.26□□□□□ -0.77
PUDP-205ENST00000498474 CCDC85AQ96PX6 553 aaPredicted RBP10.26□□□□□ -0.77
PUDP-205ENST00000498474 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
PUDP-205ENST00000498474 HACL1Q9UJ83 578 aa10.26□□□□□ -0.77
PUDP-205ENST00000498474 IQCA1LA6NCM1 817 aa10.25□□□□□ -0.77
PUDP-205ENST00000498474 TERTO14746 1132 aaKnown RBP10.25□□□□□ -0.77
PUDP-205ENST00000498474 F12P00748 615 aaPredicted RBP10.25□□□□□ -0.77
PUDP-205ENST00000498474 VARSP26640 1264 aaKnown RBP10.25□□□□□ -0.77
PUDP-205ENST00000498474 ZEB1P37275 1124 aaPredicted RBP10.25□□□□□ -0.77
PUDP-205ENST00000498474 EPS15P42566 896 aa10.25□□□□□ -0.77
PUDP-205ENST00000498474 GRAPQ13588 217 aa10.25□□□□□ -0.77
PUDP-205ENST00000498474 G2E3Q7L622 706 aa10.25□□□□□ -0.77
PUDP-205ENST00000498474 WWC1Q8IX03 1113 aa10.25□□□□□ -0.77
PUDP-205ENST00000498474 SP8Q8IXZ3 490 aa10.25□□□□□ -0.77
PUDP-205ENST00000498474 GRAPLQ8TC17 118 aaPredicted RBP10.25□□□□□ -0.77
PUDP-205ENST00000498474 TSC1Q92574 1164 aa10.25□□□□□ -0.77
PUDP-205ENST00000498474 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
PUDP-205ENST00000498474 MKRN1Q9UHC7 482 aaKnown RBP10.25□□□□□ -0.77
PUDP-205ENST00000498474 ADAMTSL1Q8N6G6 1762 aa10.24□□□□□ -0.77
PUDP-205ENST00000498474 IRS4O14654 1257 aaPredicted RBP10.24□□□□□ -0.77
PUDP-205ENST00000498474 ANP32CO43423 234 aa10.24□□□□□ -0.77
PUDP-205ENST00000498474 BBOX1O75936 387 aa10.24□□□□□ -0.77
PUDP-205ENST00000498474 SCNN1DP51172 638 aa10.24□□□□□ -0.77
PUDP-205ENST00000498474 PRPF38BQ5VTL8 546 aaKnown RBP10.24□□□□□ -0.77
PUDP-205ENST00000498474 DPP8Q6V1X1 898 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms