RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 TMED8Q6PL24 325 aaPredicted RBP9.98□□□□□ -0.81
RTCB-206ENST00000498434 ANKRD18AQ8IVF6 992 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 NLRP3Q96P20 1036 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
RTCB-206ENST00000498434 DSCC1Q9BVC3 393 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 LIMCH1Q9UPQ0 1083 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 RBM8AQ9Y5S9 174 aaKnown RBP9.98□□□□□ -0.81
RTCB-206ENST00000498434 SNX14Q9Y5W7 946 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 MED23Q9ULK4 1368 aa9.98□□□□□ -0.81
RTCB-206ENST00000498434 BCORQ6W2J9 1755 aa9.97□□□□□ -0.81
RTCB-206ENST00000498434 DDIT3P35638 169 aa9.97□□□□□ -0.81
RTCB-206ENST00000498434 FKBP4Q02790 459 aaKnown RBP eCLIP9.97□□□□□ -0.81
RTCB-206ENST00000498434 CUL4AQ13619 759 aa9.97□□□□□ -0.81
RTCB-206ENST00000498434 NECTIN1Q15223 517 aa9.97□□□□□ -0.81
RTCB-206ENST00000498434 PRPF40BQ6NWY9 871 aaKnown RBP9.97□□□□□ -0.81
RTCB-206ENST00000498434 BLOC1S2Q6QNY1 142 aa9.97□□□□□ -0.81
RTCB-206ENST00000498434 KRT27Q7Z3Y8 459 aa9.97□□□□□ -0.81
RTCB-206ENST00000498434 NBPF5PQ86XG9 351 aaPredicted RBP9.97□□□□□ -0.81
RTCB-206ENST00000498434 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
RTCB-206ENST00000498434 PUS3Q9BZE2 481 aaKnown RBP9.97□□□□□ -0.81
RTCB-206ENST00000498434 ALDH8A1Q9H2A2 487 aaPredicted RBP9.97□□□□□ -0.81
RTCB-206ENST00000498434 BTAF1O14981 1849 aa9.97□□□□□ -0.81
RTCB-206ENST00000498434 LAMB2P55268 1798 aa9.96□□□□□ -0.81
RTCB-206ENST00000498434 TAF5LO75529 589 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 HCLS1P14317 486 aaPredicted RBP9.96□□□□□ -0.82
RTCB-206ENST00000498434 CASTP20810 708 aaKnown RBP9.96□□□□□ -0.82
RTCB-206ENST00000498434 RBM6P78332 1123 aaKnown RBP9.96□□□□□ -0.82
RTCB-206ENST00000498434 RAB3GAP1Q15042 981 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 ZMYM1Q5SVZ6 1142 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 USPL1Q5W0Q7 1092 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 CREB3L3Q68CJ9 461 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 PPP1R18Q6NYC8 613 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 DDX46Q7L014 1031 aaKnown RBP9.96□□□□□ -0.82
RTCB-206ENST00000498434 RUFY3Q7L099 469 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 TMX3Q96JJ7 454 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 FAM227BQ96M60 508 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 JAKMIP1Q96N16 626 aaKnown RBP9.96□□□□□ -0.82
RTCB-206ENST00000498434 CCDC85AQ96PX6 553 aaPredicted RBP9.96□□□□□ -0.82
RTCB-206ENST00000498434 ANKRD2Q9GZV1 360 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 PDRG1Q9NUG6 133 aa9.96□□□□□ -0.82
RTCB-206ENST00000498434 A0A0D9SFI3 127 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 FAM177BA6PVY3 158 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 ARID4AP29374 1257 aaPredicted RBP9.95□□□□□ -0.82
RTCB-206ENST00000498434 MCM4P33991 863 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 MAP3K12Q12852 859 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 UBE4AQ14139 1066 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 CAVIN4Q5BKX8 364 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 VGLL2Q8N8G2 317 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 APPBP2Q92624 585 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 EPAS1Q99814 870 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 BSDC1Q9NW68 430 aaPredicted RBP9.95□□□□□ -0.82
RTCB-206ENST00000498434 PALD1Q9ULE6 856 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 ATP6V1DQ9Y5K8 247 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 CARMIL3Q8ND23 1372 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 SCN7AQ01118 1682 aa9.95□□□□□ -0.82
RTCB-206ENST00000498434 MYH14Q7Z406 1995 aaKnown RBP9.95□□□□□ -0.82
RTCB-206ENST00000498434 LY75O60449 1722 aa9.94□□□□□ -0.82
RTCB-206ENST00000498434 RIC1Q4ADV7 1423 aa9.94□□□□□ -0.82
RTCB-206ENST00000498434 SLC27A2O14975 620 aa9.94□□□□□ -0.82
RTCB-206ENST00000498434 FRAT2O75474 233 aaPredicted RBP9.94□□□□□ -0.82
RTCB-206ENST00000498434 FGFR2P21802 821 aa9.94□□□□□ -0.82
RTCB-206ENST00000498434 PTH1RQ03431 593 aa9.94□□□□□ -0.82
RTCB-206ENST00000498434 WASHC4Q2M389 1173 aa9.94□□□□□ -0.82
RTCB-206ENST00000498434 CLEC17AQ6ZS10 378 aa9.94□□□□□ -0.82
RTCB-206ENST00000498434 FLAD1Q8NFF5 587 aa9.94□□□□□ -0.82
RTCB-206ENST00000498434 KIF3AQ9Y496 699 aa9.94□□□□□ -0.82
RTCB-206ENST00000498434 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.94□□□□□ -0.82
RTCB-206ENST00000498434 LRP5O75197 1615 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 SRCAPQ6ZRS2 3230 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 WDR33Q9C0J8 1336 aaKnown RBP9.93□□□□□ -0.82
RTCB-206ENST00000498434 SEMA3EO15041 775 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 CD2BP2O95400 341 aaKnown RBP9.93□□□□□ -0.82
RTCB-206ENST00000498434 GNAT2P19087 354 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 PDCP20941 246 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 PPP4CP60510 307 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 ST5P78524 1137 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 FGD1P98174 961 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 UBE3CQ15386 1083 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
RTCB-206ENST00000498434 CCDC102BQ68D86 513 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 VPS37DQ86XT2 251 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 SYNE4Q8N205 404 aa9.93□□□□□ -0.82
RTCB-206ENST00000498434 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
RTCB-206ENST00000498434 UPF3BQ9BZI7 483 aaKnown RBP9.93□□□□□ -0.82
RTCB-206ENST00000498434 SBF2Q86WG5 1849 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 RPS6KB1P23443 525 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 ERFEQ4G0M1 354 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 TBC1D9BQ66K14 1250 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 SPATA5Q8NB90 893 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 TNPO1Q92973 898 aaKnown RBP9.92□□□□□ -0.82
RTCB-206ENST00000498434 TTC14Q96N46 770 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 NEK1Q96PY6 1258 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 MTRQ99707 1265 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 IL25Q9H293 177 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 IL21Q9HBE4 155 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 SMC3Q9UQE7 1217 aa9.92□□□□□ -0.82
RTCB-206ENST00000498434 RPAP1Q9BWH6 1393 aaPredicted RBP9.91□□□□□ -0.82
RTCB-206ENST00000498434 C4BP0C0L5 1744 aa9.91□□□□□ -0.82
RTCB-206ENST00000498434 DDX60Q8IY21 1712 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms