RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 MARCH6O60337 910 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 CLSTN1O94985 981 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 GRNP28799 593 aaKnown RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 IGBP1P78318 339 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 FSTL1Q12841 308 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 TRIP4Q15650 581 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 VPS72Q15906 364 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 RNF187Q5TA31 235 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 RC3H1Q5TC82 1133 aaKnown RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 SV2BQ7L1I2 683 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 CCDC84Q86UT8 332 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 KIAA0825Q8IV33 1275 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 SLITRK4Q8IW52 837 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 EHBP1Q8NDI1 1231 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 NKX2-3Q8TAU0 364 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 GPR152Q8TDT2 470 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 EPS8L3Q8TE67 593 aaKnown RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 ZNF669Q96BR6 464 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 EAF1Q96JC9 268 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 SNX27Q96L92 541 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 TMEM74Q96NL1 305 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 PCGF6Q9BYE7 350 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 BCO2Q9BYV7 579 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 PCDH12Q9NPG4 1184 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 KBTBD4Q9NVX7 518 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 FNDC3AQ9Y2H6 1198 aaKnown RBP3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 EID1Q9Y6B2 187 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 SLIT1O75093 1534 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 SLIT2O94813 1529 aa3.47□□□□□ -1.85
CKS1BP2-201ENST00000497342 ADGRB2O60241 1585 aa3.46□□□□□ -1.85
CKS1BP2-201ENST00000497342 SAMD9LQ8IVG5 1584 aa3.46□□□□□ -1.85
CKS1BP2-201ENST00000497342 hCG_2014768A0A024R1R8 64 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 CTCFP49711 727 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 RNF144AP50876 292 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 FXR1P51114 621 aaKnown RBP eCLIP3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 ARSDP51689 593 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 KCNQ4P56696 695 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 RPS26P62854 115 aaKnown RBP3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 GRM2Q14416 872 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 BMS1Q14692 1282 aaKnown RBP3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 GRIN2CQ14957 1233 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 USPL1Q5W0Q7 1092 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 SYNPOQ8N3V7 929 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 PMFBP1Q8TBY8 1022 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 TRPM4Q8TD43 1214 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 SUSD3Q96L08 255 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 SPON2Q9BUD6 331 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 KRTAP3-3Q9BYR6 98 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 KRTAP3-2Q9BYR7 98 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 MTFR1LQ9H019 292 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 IRF2BPLQ9H1B7 796 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 ZFYVE1Q9HBF4 777 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 COPRSQ9NQ92 184 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 TMEM260Q9NX78 707 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 SNTG2Q9NY99 539 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 ANKIB1Q9P2G1 1089 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 PRKAG3Q9UGI9 489 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 FOXD3Q9UJU5 478 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 TRAK1Q9UPV9 953 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 SUGT1Q9Y2Z0 365 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 COL4A3BPQ9Y5P4 624 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 NUP153P49790 1475 aaKnown RBP3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 MYOM2P54296 1465 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 CHD8Q9HCK8 2581 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 TET3O43151 1660 aa3.46□□□□□ -1.86
CKS1BP2-201ENST00000497342 SOS2Q07890 1332 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 CD2BP2O95400 341 aaKnown RBP3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 IBSPP21815 317 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 IRS1P35568 1242 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 EIF4A3P38919 411 aaKnown RBP3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 TXLNAP40222 546 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 LBX1P52954 281 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 RAB15P59190 212 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 LMNB2Q03252 620 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 CBLBQ13191 982 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 RASGRF1Q13972 1273 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 TNNI3KQ59H18 835 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 SAMD5Q5TGI4 173 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 PCNX4Q63HM2 1172 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 SCARA3Q6AZY7 606 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 PI16Q6UXB8 463 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 RBBP8NLQ8NC74 664 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 PHC3Q8NDX5 983 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 STAG1Q8WVM7 1258 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 RELTQ969Z4 430 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 EMID1Q96A84 441 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 SHDQ96IW2 340 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 ZSCAN10Q96SZ4 725 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 ELP3Q9H9T3 547 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 SPC25Q9HBM1 224 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 NPHS2Q9NP85 383 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 RAB6BQ9NRW1 208 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 IFT57Q9NWB7 429 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 CABP1Q9NZU7 370 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 HCN4Q9Y3Q4 1203 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 TLL2Q9Y6L7 1015 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 DHX57Q6P158 1386 aaKnown RBP3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 PLXNC1O60486 1568 aa3.45□□□□□ -1.86
CKS1BP2-201ENST00000497342 ABCC5O15440 1437 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 262.8 ms