RNA–Protein interactions for RNA: ENST00000496239.5

NECAP2-207, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 4,619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-207ENST00000496239 CCDC129Q6ZRS4 1044 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 SMCR8Q8TEV9 937 aaPredicted RBP12.73□□□□□ -0.37
NECAP2-207ENST00000496239 EPS15P42566 896 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 EDC3Q96F86 508 aaKnown RBP12.73□□□□□ -0.37
NECAP2-207ENST00000496239 H7C1W4 665 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 ATP5JP18859 108 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 PDE4CQ08493 712 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 CHST3Q7LGC8 479 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
NECAP2-207ENST00000496239 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 TANGO6Q9C0B7 1094 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 SAMM50Q9Y512 469 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 TPM3P06753 285 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 NKX1-1Q15270 411 aaPredicted RBP12.73□□□□□ -0.37
NECAP2-207ENST00000496239 OLFM4Q6UX06 510 aa12.73□□□□□ -0.37
NECAP2-207ENST00000496239 GPR101Q96P66 508 aaPredicted RBP12.73□□□□□ -0.37
NECAP2-207ENST00000496239 BSDC1Q9NW68 430 aaPredicted RBP12.73□□□□□ -0.37
NECAP2-207ENST00000496239 CFAP45Q9UL16 551 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 CEP131Q9UPN4 1083 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 MROH1Q8NDA8 1641 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 USP17L3A6NCW0 530 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 USP17L4A6NCW7 530 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 IRX3P78415 501 aaPredicted RBP12.72□□□□□ -0.37
NECAP2-207ENST00000496239 USP17L1Q7RTZ2 530 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
NECAP2-207ENST00000496239 IGKV5-2P06315 115 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 HEATR3Q7Z4Q2 680 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
NECAP2-207ENST00000496239 IQGAP1P46940 1657 aa12.72□□□□□ -0.37
NECAP2-207ENST00000496239 RNF123Q5XPI4 1314 aa12.71□□□□□ -0.37
NECAP2-207ENST00000496239 ADORA1P30542 326 aa12.71□□□□□ -0.37
NECAP2-207ENST00000496239 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.37
NECAP2-207ENST00000496239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.71□□□□□ -0.37
NECAP2-207ENST00000496239 BAG4O95429 457 aaKnown RBP12.71□□□□□ -0.37
NECAP2-207ENST00000496239 PDIA4P13667 645 aaKnown RBP12.71□□□□□ -0.37
NECAP2-207ENST00000496239 BTDP43251 543 aa12.71□□□□□ -0.37
NECAP2-207ENST00000496239 COA1Q9GZY4 146 aa12.71□□□□□ -0.37
NECAP2-207ENST00000496239 CIAO1O76071 339 aa12.71□□□□□ -0.38
NECAP2-207ENST00000496239 CHMLP26374 656 aa12.71□□□□□ -0.38
NECAP2-207ENST00000496239 DHX8Q14562 1220 aaKnown RBP12.71□□□□□ -0.38
NECAP2-207ENST00000496239 TMEM266Q2M3C6 531 aa12.71□□□□□ -0.38
NECAP2-207ENST00000496239 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.38
NECAP2-207ENST00000496239 ABT1Q9ULW3 272 aaKnown RBP12.71□□□□□ -0.38
NECAP2-207ENST00000496239 RAD50Q92878 1312 aa12.71□□□□□ -0.38
NECAP2-207ENST00000496239 MTFR1LQ9H019 292 aa12.71□□□□□ -0.38
NECAP2-207ENST00000496239 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 USP17L21D6R901 530 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 PPP4R3AQ6IN85 833 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 PRR5LQ6MZQ0 368 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 CALM1P0DP23 149 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 CALM2P0DP24 149 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 CALM3P0DP25 149 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 PDE6AP16499 860 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 GOLGA6L3A6NEY3 463 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 SEMA3EO15041 775 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 NAPAP54920 295 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 GRIPAP1Q4V328 841 aa12.7□□□□□ -0.38
NECAP2-207ENST00000496239 B4E1Z4 1266 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.38
NECAP2-207ENST00000496239 CPXCR1Q8N123 301 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 SPATA32Q96LK8 384 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 FAM227BQ96M60 508 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 ISCA1Q9BUE6 129 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 SLC1A4P43007 532 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 Q6ZUG5 572 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 CCDC148Q8NFR7 591 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 PRPF40AO75400 957 aaKnown RBP12.69□□□□□ -0.38
NECAP2-207ENST00000496239 IPO7O95373 1038 aaKnown RBP12.69□□□□□ -0.38
NECAP2-207ENST00000496239 AOC3Q16853 763 aa12.69□□□□□ -0.38
NECAP2-207ENST00000496239 COL23A1Q86Y22 540 aaPredicted RBP12.69□□□□□ -0.38
NECAP2-207ENST00000496239 TRIM28Q13263 835 aaKnown RBP12.68□□□□□ -0.38
NECAP2-207ENST00000496239 CREB3L3Q68CJ9 461 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 POTEAQ6S8J7 498 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 RRP36Q96EU6 259 aaKnown RBP12.68□□□□□ -0.38
NECAP2-207ENST00000496239 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 SNAP23O00161 211 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 PARP1P09874 1014 aaKnown RBP12.68□□□□□ -0.38
NECAP2-207ENST00000496239 PTPN12Q05209 780 aaKnown RBP12.68□□□□□ -0.38
NECAP2-207ENST00000496239 PODNQ7Z5L7 613 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 CKAP2LQ8IYA6 745 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 MINPP1Q9UNW1 487 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 CAMTA2O94983 1202 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 OFD1O75665 1012 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 STIM1Q13586 685 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 AS3MTQ9HBK9 375 aa12.68□□□□□ -0.38
NECAP2-207ENST00000496239 MSNP26038 577 aaKnown RBP12.67□□□□□ -0.38
NECAP2-207ENST00000496239 TFAP4Q01664 338 aa12.67□□□□□ -0.38
NECAP2-207ENST00000496239 TBC1D10BQ4KMP7 808 aaPredicted RBP12.67□□□□□ -0.38
NECAP2-207ENST00000496239 DHX32Q7L7V1 743 aaKnown RBP12.67□□□□□ -0.38
NECAP2-207ENST00000496239 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
NECAP2-207ENST00000496239 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
NECAP2-207ENST00000496239 RTL9Q8NET4 1388 aa12.67□□□□□ -0.38
NECAP2-207ENST00000496239 OTUD7BQ6GQQ9 843 aa12.67□□□□□ -0.38
NECAP2-207ENST00000496239 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
NECAP2-207ENST00000496239 DBNLQ9UJU6 430 aaKnown RBP12.67□□□□□ -0.38
NECAP2-207ENST00000496239 TRMT2AQ8IZ69 625 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms