RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 ARFGAP3Q9NP61 516 aa8.2□□□□□ -1.1
EPHA3-203ENST00000494014 STAP2Q9UGK3 403 aa8.2□□□□□ -1.1
EPHA3-203ENST00000494014 COL11A2P13942 1736 aaPredicted RBP8.2□□□□□ -1.1
EPHA3-203ENST00000494014 VPS37CA5D8V6 355 aaPredicted RBP8.2□□□□□ -1.1
EPHA3-203ENST00000494014 GNPATO15228 680 aa8.2□□□□□ -1.1
EPHA3-203ENST00000494014 ETF1P62495 437 aaKnown RBP8.2□□□□□ -1.1
EPHA3-203ENST00000494014 STX1AQ16623 288 aa8.2□□□□□ -1.1
EPHA3-203ENST00000494014 LRRFIP1Q32MZ4 808 aaKnown RBP8.2□□□□□ -1.1
EPHA3-203ENST00000494014 ZNF530Q6P9A1 599 aaPredicted RBP8.2□□□□□ -1.1
EPHA3-203ENST00000494014 INTS5Q6P9B9 1019 aaKnown RBP8.2□□□□□ -1.1
EPHA3-203ENST00000494014 RUFY3Q7L099 469 aa8.2□□□□□ -1.1
EPHA3-203ENST00000494014 MSL3Q8N5Y2 521 aaKnown RBP8.2□□□□□ -1.1
EPHA3-203ENST00000494014 BECN2A8MW95 431 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 CORO7P57737 925 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 ZRSR1Q15695 479 aaKnown RBP8.19□□□□□ -1.1
EPHA3-203ENST00000494014 C1orf141Q5JVX7 400 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 MMS22LQ6ZRQ5 1243 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 SNX14Q9Y5W7 946 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 EIF3CLB5ME19 914 aaKnown RBP8.19□□□□□ -1.1
EPHA3-203ENST00000494014 KCNA3P22001 575 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 PRKAR2BP31323 418 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 CABP4P57796 275 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 ARID5BQ14865 1188 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 CT47A1Q5JQC4 288 aaPredicted RBP8.19□□□□□ -1.1
EPHA3-203ENST00000494014 EFCAB13Q8IY85 973 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 GPATCH11Q8N954 259 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 ARHGEF1Q92888 912 aaKnown RBP8.19□□□□□ -1.1
EPHA3-203ENST00000494014 RILPL2Q969X0 211 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 SPATA32Q96LK8 384 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 EIF3CQ99613 913 aaKnown RBP8.19□□□□□ -1.1
EPHA3-203ENST00000494014 LRRCC1Q9C099 1032 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 FAM107BQ9H098 131 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 CXorf56Q9H5V9 222 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 MED4Q9NPJ6 270 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 TOMM22Q9NS69 142 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 DLG5Q8TDM6 1919 aa8.19□□□□□ -1.1
EPHA3-203ENST00000494014 TSGA10IPQ3SY00 556 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 E4F1Q66K89 784 aaPredicted RBP8.18□□□□□ -1.1
EPHA3-203ENST00000494014 TEX13AQ9BXU3 409 aaPredicted RBP8.18□□□□□ -1.1
EPHA3-203ENST00000494014 LTBP3Q9NS15 1303 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 A0A087WZG4 1122 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 RNMTO43148 476 aaKnown RBP8.18□□□□□ -1.1
EPHA3-203ENST00000494014 KCNQ4P56696 695 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 VPS53Q5VIR6 699 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 CCDC196A0A1B0GTZ2 297 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 ELL2O00472 640 aaPredicted RBP8.18□□□□□ -1.1
EPHA3-203ENST00000494014 SASH3O75995 380 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 SEC31AO94979 1220 aaKnown RBP8.18□□□□□ -1.1
EPHA3-203ENST00000494014 SMC2O95347 1197 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 MMP10P09238 476 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 USP8P40818 1118 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 EVCP57679 992 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 SATB1Q01826 763 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 CCDC83Q8IWF9 413 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 RBM46Q8TBY0 533 aaKnown RBP8.18□□□□□ -1.1
EPHA3-203ENST00000494014 TM6SF1Q9BZW5 370 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 ZSCAN16Q9H4T2 348 aaPredicted RBP8.18□□□□□ -1.1
EPHA3-203ENST00000494014 USP16Q9Y5T5 823 aa8.18□□□□□ -1.1
EPHA3-203ENST00000494014 ADAMTSL1Q8N6G6 1762 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 POLRMTO00411 1230 aaKnown RBP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 KIF3CO14782 793 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 CYP19A1P11511 503 aaPredicted RBP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 CRKLP46109 303 aaKnown RBP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 FSTL1Q12841 308 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 LARP1BQ659C4 914 aaKnown RBP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 HOMER1Q86YM7 354 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 HOMEZQ8IX15 550 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 C8orf58Q8NAV2 365 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 LRRN4CLQ8ND94 238 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 TACO1Q9BSH4 297 aaKnown RBP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 FUT8Q9BYC5 575 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 ZCCHC17Q9NP64 241 aaKnown RBP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 ANO10Q9NW15 660 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 HYPKQ9NX55 129 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 NARFQ9UHQ1 456 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 COL15A1P39059 1388 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 CCDC151A5D8V7 595 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 EIF3JO75822 258 aaKnown RBP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 HSPA6P17066 643 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 SFPQP23246 707 aaKnown RBP eCLIP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 BRD3Q15059 726 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 BICD2Q8TD16 824 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 LEO1Q8WVC0 666 aaPredicted RBP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 MEIS3Q99687 375 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 NAT10Q9H0A0 1025 aaKnown RBP8.17□□□□□ -1.1
EPHA3-203ENST00000494014 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 SCN4AP35499 1836 aa8.17□□□□□ -1.1
EPHA3-203ENST00000494014 SGSM2O43147 1006 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 ANKRD20A12PQ8NF67 263 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 RABGGTAQ92696 567 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 MPHOSPH8Q99549 860 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 PARP3Q9Y6F1 533 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 SRCAPQ6ZRS2 3230 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 A0A087WUV0 522 aaPredicted RBP8.16□□□□□ -1.1
EPHA3-203ENST00000494014 MAP2K7O14733 419 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 MAP2K2P36507 400 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 TRDNQ13061 729 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 FCHSD1Q86WN1 690 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 CEP57L1Q8IYX8 460 aa8.16□□□□□ -1.1
EPHA3-203ENST00000494014 CCDC34Q96HJ3 373 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms