RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 RNF208Q9H0X6 261 aa7.76□□□□□ -1.17
ITGB1-216ENST00000493758 DDX3YO15523 660 aaKnown RBP7.75□□□□□ -1.17
ITGB1-216ENST00000493758 CYP11A1P05108 521 aa7.75□□□□□ -1.17
ITGB1-216ENST00000493758 IREB2P48200 963 aaKnown RBP7.75□□□□□ -1.17
ITGB1-216ENST00000493758 NLRP12P59046 1061 aa7.75□□□□□ -1.17
ITGB1-216ENST00000493758 FAAP100Q0VG06 881 aa7.75□□□□□ -1.17
ITGB1-216ENST00000493758 ANKRD34AQ69YU3 496 aa7.75□□□□□ -1.17
ITGB1-216ENST00000493758 DTHD1Q6ZMT9 781 aa7.75□□□□□ -1.17
ITGB1-216ENST00000493758 TMPRSS13Q9BYE2 586 aa7.75□□□□□ -1.17
ITGB1-216ENST00000493758 SYNGAP1Q96PV0 1343 aa7.75□□□□□ -1.17
ITGB1-216ENST00000493758 FCGRTP55899 365 aa7.74□□□□□ -1.17
ITGB1-216ENST00000493758 RSPO4Q2I0M5 234 aaPredicted RBP7.74□□□□□ -1.17
ITGB1-216ENST00000493758 TMCO4Q5TGY1 634 aa7.74□□□□□ -1.17
ITGB1-216ENST00000493758 GSTM4Q03013 218 aa7.73□□□□□ -1.17
ITGB1-216ENST00000493758 FAM46AQ96IP4 442 aaKnown RBP7.73□□□□□ -1.17
ITGB1-216ENST00000493758 RUSC1Q9BVN2 902 aa7.73□□□□□ -1.17
ITGB1-216ENST00000493758 TIAF1O95411 115 aa7.72□□□□□ -1.17
ITGB1-216ENST00000493758 TMC4Q7Z404 712 aa7.72□□□□□ -1.17
ITGB1-216ENST00000493758 AGGF1Q8N302 714 aaeCLIP7.72□□□□□ -1.17
ITGB1-216ENST00000493758 SMG8Q8ND04 991 aaKnown RBP7.72□□□□□ -1.17
ITGB1-216ENST00000493758 DUSP9Q99956 384 aaKnown RBP7.72□□□□□ -1.17
ITGB1-216ENST00000493758 TMEM39AQ9NV64 488 aa7.72□□□□□ -1.17
ITGB1-216ENST00000493758 DAB2P98082 770 aa7.71□□□□□ -1.18
ITGB1-216ENST00000493758 PPP2R3AQ06190 1150 aa7.71□□□□□ -1.18
ITGB1-216ENST00000493758 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.71□□□□□ -1.18
ITGB1-216ENST00000493758 USP26Q9BXU7 913 aa7.71□□□□□ -1.18
ITGB1-216ENST00000493758 CEP44Q9C0F1 390 aa7.71□□□□□ -1.18
ITGB1-216ENST00000493758 HIF3AQ9Y2N7 669 aa7.71□□□□□ -1.18
ITGB1-216ENST00000493758 AK5Q9Y6K8 562 aa7.71□□□□□ -1.18
ITGB1-216ENST00000493758 ALX3O95076 343 aa7.7□□□□□ -1.18
ITGB1-216ENST00000493758 DLGAP3O95886 979 aa7.7□□□□□ -1.18
ITGB1-216ENST00000493758 USP17L7P0C7H9 530 aa7.7□□□□□ -1.18
ITGB1-216ENST00000493758 GLB1P16278 677 aa7.7□□□□□ -1.18
ITGB1-216ENST00000493758 EIF4BP23588 611 aaKnown RBP7.7□□□□□ -1.18
ITGB1-216ENST00000493758 ITGAEP38570 1179 aa7.7□□□□□ -1.18
ITGB1-216ENST00000493758 POU4F3Q15319 338 aa7.7□□□□□ -1.18
ITGB1-216ENST00000493758 SCARA3Q6AZY7 606 aa7.7□□□□□ -1.18
ITGB1-216ENST00000493758 NECAB3Q96P71 396 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-216ENST00000493758 UBL7Q96S82 380 aaPredicted RBP7.7□□□□□ -1.18
ITGB1-216ENST00000493758 KRT82Q9NSB4 513 aa7.7□□□□□ -1.18
ITGB1-216ENST00000493758 DYRK3O43781 588 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 ADAM23O75077 832 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 MAOBP27338 520 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 HNRNPUQ00839 825 aaKnown RBP eCLIP7.69□□□□□ -1.18
ITGB1-216ENST00000493758 DOC2BQ14184 412 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 EXOSC6Q5RKV6 272 aaKnown RBP7.69□□□□□ -1.18
ITGB1-216ENST00000493758 PDZD3Q86UT5 571 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 MYRFLQ96LU7 910 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 CORO1BQ9BR76 489 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 CYP4F12Q9HCS2 524 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 CACNA2D2Q9NY47 1150 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 PARP2Q9UGN5 583 aa7.69□□□□□ -1.18
ITGB1-216ENST00000493758 K7ELQ4 463 aaPredicted RBP7.68□□□□□ -1.18
ITGB1-216ENST00000493758 ENC1O14682 589 aa7.68□□□□□ -1.18
ITGB1-216ENST00000493758 CTSBP07858 339 aa7.68□□□□□ -1.18
ITGB1-216ENST00000493758 FDX2Q6P4F2 183 aa7.68□□□□□ -1.18
ITGB1-216ENST00000493758 PRR23CQ6ZRP0 262 aa7.68□□□□□ -1.18
ITGB1-216ENST00000493758 ARMC10Q8N2F6 343 aa7.68□□□□□ -1.18
ITGB1-216ENST00000493758 TP53INP1Q96A56 240 aa7.68□□□□□ -1.18
ITGB1-216ENST00000493758 GPN3Q9UHW5 284 aaPredicted RBP7.68□□□□□ -1.18
ITGB1-216ENST00000493758 GSTP1P09211 210 aaKnown RBP7.67□□□□□ -1.18
ITGB1-216ENST00000493758 NME2P22392 152 aa7.67□□□□□ -1.18
ITGB1-216ENST00000493758 PREPP48147 710 aa7.67□□□□□ -1.18
ITGB1-216ENST00000493758 ST13P50502 369 aaKnown RBP7.67□□□□□ -1.18
ITGB1-216ENST00000493758 MFAP1P55081 439 aaKnown RBP7.67□□□□□ -1.18
ITGB1-216ENST00000493758 NUTM2GQ5VZR2 741 aa7.67□□□□□ -1.18
ITGB1-216ENST00000493758 SLC51AQ86UW1 340 aa7.67□□□□□ -1.18
ITGB1-216ENST00000493758 CRELD1Q96HD1 420 aa7.67□□□□□ -1.18
ITGB1-216ENST00000493758 GSX1Q9H4S2 264 aaPredicted RBP7.67□□□□□ -1.18
ITGB1-216ENST00000493758 AKAP2Q9Y2D5 859 aa7.67□□□□□ -1.18
ITGB1-216ENST00000493758 FURINP09958 794 aa7.66□□□□□ -1.18
ITGB1-216ENST00000493758 ADH5P11766 374 aa7.66□□□□□ -1.18
ITGB1-216ENST00000493758 ZNF252P-AS1Q0IIN9 211 aa7.66□□□□□ -1.18
ITGB1-216ENST00000493758 SV2BQ7L1I2 683 aa7.66□□□□□ -1.18
ITGB1-216ENST00000493758 SULF2Q8IWU5 870 aa7.66□□□□□ -1.18
ITGB1-216ENST00000493758 DHX15O43143 795 aaKnown RBP7.65□□□□□ -1.18
ITGB1-216ENST00000493758 ECEL1O95672 775 aa7.65□□□□□ -1.18
ITGB1-216ENST00000493758 ITGB7P26010 798 aa7.65□□□□□ -1.18
ITGB1-216ENST00000493758 TRIM26Q12899 539 aaPredicted RBP7.65□□□□□ -1.18
ITGB1-216ENST00000493758 PSMD2Q13200 908 aa7.65□□□□□ -1.18
ITGB1-216ENST00000493758 KIF4BQ2VIQ3 1234 aa7.65□□□□□ -1.18
ITGB1-216ENST00000493758 UTP4Q969X6 686 aaKnown RBP7.65□□□□□ -1.18
ITGB1-216ENST00000493758 BCL2L13Q9BXK5 485 aa7.65□□□□□ -1.18
ITGB1-216ENST00000493758 EMILIN2Q9BXX0 1053 aa7.65□□□□□ -1.18
ITGB1-216ENST00000493758 RNF19AQ9NV58 838 aa7.65□□□□□ -1.18
ITGB1-216ENST00000493758 SAMM50Q9Y512 469 aa7.65□□□□□ -1.18
ITGB1-216ENST00000493758 PCDHGC5Q9Y5F6 944 aa7.65□□□□□ -1.18
ITGB1-216ENST00000493758 ARNTP27540 789 aa7.64□□□□□ -1.19
ITGB1-216ENST00000493758 TPTE2Q6XPS3 522 aa7.64□□□□□ -1.19
ITGB1-216ENST00000493758 FAM20CQ8IXL6 584 aa7.64□□□□□ -1.19
ITGB1-216ENST00000493758 C2CD4AQ8NCU7 369 aaPredicted RBP7.64□□□□□ -1.19
ITGB1-216ENST00000493758 WDR18Q9BV38 432 aa7.64□□□□□ -1.19
ITGB1-216ENST00000493758 XPCQ01831 940 aaPredicted RBP7.63□□□□□ -1.19
ITGB1-216ENST00000493758 SOX4Q06945 474 aaPredicted RBP7.63□□□□□ -1.19
ITGB1-216ENST00000493758 STK35Q8TDR2 534 aa7.63□□□□□ -1.19
ITGB1-216ENST00000493758 NOC4LQ9BVI4 516 aaKnown RBP7.63□□□□□ -1.19
ITGB1-216ENST00000493758 CCDC86Q9H6F5 360 aaKnown RBP7.63□□□□□ -1.19
ITGB1-216ENST00000493758 GSC2O15499 205 aa7.62□□□□□ -1.19
ITGB1-216ENST00000493758 SORBS3O60504 671 aa7.62□□□□□ -1.19
ITGB1-216ENST00000493758 AOC2O75106 756 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms