RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 FAM13BQ9NYF5 915 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 TTC41PQ6P2S7 1318 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 AKAP12Q02952 1782 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 CDHR2Q9BYE9 1310 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 USP17L3A6NCW0 530 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 USP17L4A6NCW7 530 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 GPAA1O43292 621 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 TSPY3P0CV98 308 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 TSPY8P0CW00 308 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 SRGNP10124 158 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 KLRK1P26718 216 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 TNNI2P48788 182 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 DYNLL1P63167 89 aaKnown RBP5.28□□□□□ -1.56
TRA2B-215ENST00000492417 PDE4BQ07343 736 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 SF3B3Q15393 1217 aaKnown RBP5.28□□□□□ -1.56
TRA2B-215ENST00000492417 BMP2KLQ5H9B9 411 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 USP17L1Q7RTZ2 530 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 SP8Q8IXZ3 490 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 NLGN2Q8NFZ4 835 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 TBC1D16Q8TBP0 767 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 TBC1D22AQ8WUA7 517 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 ZNF287Q9HBT7 754 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 SMC3Q9UQE7 1217 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 ABCC12Q96J65 1359 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 BTDP43251 543 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 CCT2P78371 535 aaKnown RBP5.28□□□□□ -1.56
TRA2B-215ENST00000492417 TMC4Q7Z404 712 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 KBTBD3Q8NAB2 608 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 DCPSQ96C86 337 aaKnown RBP5.28□□□□□ -1.56
TRA2B-215ENST00000492417 PDRG1Q9NUG6 133 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 HMG20BQ9P0W2 317 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 ATP6V0A2Q9Y487 856 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 RBM8AQ9Y5S9 174 aaKnown RBP5.28□□□□□ -1.56
TRA2B-215ENST00000492417 COL16A1Q07092 1604 aaPredicted RBP5.27□□□□□ -1.57
TRA2B-215ENST00000492417 SF3A1Q15459 793 aaKnown RBP5.27□□□□□ -1.57
TRA2B-215ENST00000492417 MIGA2Q7L4E1 593 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 MICU3Q86XE3 530 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 HOMER1Q86YM7 354 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 CRAMP1Q96RY5 1269 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 CLSTN1O94985 981 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 CPA1P15085 419 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 PDE6AP16499 860 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 PLCG2P16885 1265 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 CHMP4BP1P59074 171 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 PRAMEF18Q5VWM3 479 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 C9orf131Q5VYM1 1079 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 AKT1S1Q96B36 256 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 SYT17Q9BSW7 474 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 TDRD3Q9H7E2 651 aaKnown RBP5.27□□□□□ -1.57
TRA2B-215ENST00000492417 KIF3AQ9Y496 699 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 USP17L12C9JPN9 530 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 USP17L21D6R901 530 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 GRIN3BO60391 1043 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 CIAO1O76071 339 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 USP17L8P0C7I0 530 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 ATP5JP18859 108 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 RXRAP19793 462 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 IARSP41252 1262 aaKnown RBP5.27□□□□□ -1.57
TRA2B-215ENST00000492417 MCAMP43121 646 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 TXNRD3Q86VQ6 643 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 FAM84BQ96KN1 310 aaPredicted RBP5.27□□□□□ -1.57
TRA2B-215ENST00000492417 COA1Q9GZY4 146 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 TCEAL9Q9UHQ7 104 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 RIPOR2Q9Y4F9 1068 aa5.27□□□□□ -1.57
TRA2B-215ENST00000492417 IBTKQ9P2D0 1353 aaPredicted RBP5.27□□□□□ -1.57
TRA2B-215ENST00000492417 CHMLP26374 656 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 CTDSPL2Q05D32 466 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 SCARF1Q14162 830 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 TMEM67Q5HYA8 995 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 APPBP2Q92624 585 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 KAZALD1Q96I82 304 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 ESYT1Q9BSJ8 1104 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 BACH2Q9BYV9 841 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 RNF41Q9H4P4 317 aaPredicted RBP5.26□□□□□ -1.57
TRA2B-215ENST00000492417 PRKAB2O43741 272 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 POLA2Q14181 598 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 PLS1Q14651 629 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 ATG9AQ7Z3C6 839 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 TTC6Q86TZ1 520 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 POLLQ9UGP5 575 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 BRPF3Q9ULD4 1205 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 RGPD5Q99666 1765 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 MAST3O60307 1309 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 FAM196BA6NMK8 535 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 CSF1RP07333 972 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 CEBPZQ03701 1054 aaKnown RBP5.26□□□□□ -1.57
TRA2B-215ENST00000492417 CFAP100Q494V2 611 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 TRMT1LQ7Z2T5 733 aaKnown RBP5.26□□□□□ -1.57
TRA2B-215ENST00000492417 SAMD7Q7Z3H4 446 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 PODNQ7Z5L7 613 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 PIH1D3Q9NQM4 214 aaKnown RBP5.26□□□□□ -1.57
TRA2B-215ENST00000492417 PALD1Q9ULE6 856 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 CCDC171Q6TFL3 1326 aa5.26□□□□□ -1.57
TRA2B-215ENST00000492417 A0A0D9SFI3 127 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 B4E1Z4 1266 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 WDHD1O75717 1129 aaPredicted RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 CHGBP05060 677 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 TM4SF1P30408 202 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 TGFB2P61812 414 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 GUCY1B3Q02153 619 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms