RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 ZKSCAN1P17029 563 aaPredicted RBP14.3□□□□□ -0.12
SRGAP3-210ENST00000491467 NECTIN1Q15223 517 aa14.3□□□□□ -0.12
SRGAP3-210ENST00000491467 TMX3Q96JJ7 454 aa14.3□□□□□ -0.12
SRGAP3-210ENST00000491467 SNX14Q9Y5W7 946 aa14.3□□□□□ -0.12
SRGAP3-210ENST00000491467 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
SRGAP3-210ENST00000491467 ABCC12Q96J65 1359 aa14.3□□□□□ -0.12
SRGAP3-210ENST00000491467 COL4A5P29400 1685 aa14.3□□□□□ -0.12
SRGAP3-210ENST00000491467 PSMA5P28066 241 aa14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 EIF5P55010 431 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 IFIT5Q13325 482 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 TSGA10IPQ3SY00 556 aa14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 NLRP10Q86W26 655 aa14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 CNBD1Q8NA66 436 aa14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 ZC3H15Q8WU90 426 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 DPF3Q92784 378 aa14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 ZSCAN31Q96LW9 406 aaPredicted RBP14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 ALDH8A1Q9H2A2 487 aaPredicted RBP14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 HMG20BQ9P0W2 317 aa14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 PALD1Q9ULE6 856 aa14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 TRIM17Q9Y577 477 aa14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.29□□□□□ -0.12
SRGAP3-210ENST00000491467 ZNF609O15014 1411 aa14.28□□□□□ -0.12
SRGAP3-210ENST00000491467 PDE8AO60658 829 aa14.28□□□□□ -0.12
SRGAP3-210ENST00000491467 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
SRGAP3-210ENST00000491467 DZIP3Q86Y13 1208 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-210ENST00000491467 ZNF34Q8IZ26 560 aa14.28□□□□□ -0.12
SRGAP3-210ENST00000491467 LARGE2Q8N3Y3 721 aa14.28□□□□□ -0.12
SRGAP3-210ENST00000491467 DEFB123Q8N688 67 aa14.28□□□□□ -0.12
SRGAP3-210ENST00000491467 TLR7Q9NYK1 1049 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-210ENST00000491467 HTTP42858 3142 aa14.28□□□□□ -0.12
SRGAP3-210ENST00000491467 ARAP2Q8WZ64 1704 aa14.27□□□□□ -0.12
SRGAP3-210ENST00000491467 MED23Q9ULK4 1368 aa14.27□□□□□ -0.12
SRGAP3-210ENST00000491467 CYP2E1P05181 493 aaPredicted RBP14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 HIRAP54198 1017 aaPredicted RBP14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 KRT32Q14532 448 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 PARP10Q53GL7 1025 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 CCDC158Q5M9N0 1113 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 VPS53Q5VIR6 699 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 KBTBD3Q8NAB2 608 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 TTC14Q96N46 770 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 DBNDD2Q9BQY9 259 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 IL25Q9H293 177 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 HELLSQ9NRZ9 838 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 ZBTB1Q9Y2K1 713 aa14.27□□□□□ -0.13
SRGAP3-210ENST00000491467 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 NPR1P16066 1061 aa14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 NOM1Q5C9Z4 860 aaKnown RBP14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 TAF7LQ5H9L4 462 aa14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 NEUROD6Q96NK8 337 aa14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 ZSWIM6Q9HCJ5 1215 aa14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 ISY1Q9ULR0 285 aaKnown RBP14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 LIMCH1Q9UPQ0 1083 aa14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 CYP46A1Q9Y6A2 500 aa14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 LAMA4Q16363 1823 aa14.26□□□□□ -0.13
SRGAP3-210ENST00000491467 SH3TC1Q8TE82 1336 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 DDX60Q8IY21 1712 aaKnown RBP14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 TRAK2O60296 914 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 KCNJ4P48050 445 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 PTH1RQ03431 593 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 ANKRD1Q15327 319 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 HLFQ16534 295 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 MCMDC2Q4G0Z9 681 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 TTLL11Q8NHH1 800 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 FAM89AQ96GI7 184 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 ZNF512BQ96KM6 892 aaPredicted RBP14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 PSMD1Q99460 953 aa14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 SH2B1Q9NRF2 756 aaPredicted RBP14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 RBM8AQ9Y5S9 174 aaKnown RBP14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
SRGAP3-210ENST00000491467 A0A1B0GUL7 405 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 IRS4O14654 1257 aaPredicted RBP14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 ZFYP08048 801 aaPredicted RBP14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 IFIT1P09914 478 aaKnown RBP14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 CTSWP56202 376 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 LRRC24Q50LG9 513 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 CREB3L3Q68CJ9 461 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 CLEC4GQ6UXB4 293 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 RUFY3Q7L099 469 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 RASAL3Q86YV0 1011 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 NIM1KQ8IY84 436 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 SETDB2Q96T68 719 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 FOXD4L1Q9NU39 408 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 PAG1Q9NWQ8 432 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 TRMT112Q9UI30 125 aaKnown RBP14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 RIPOR2Q9Y4F9 1068 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 VCANP13611 3396 aa14.24□□□□□ -0.13
SRGAP3-210ENST00000491467 GMPSP49915 693 aaPredicted RBP14.23□□□□□ -0.13
SRGAP3-210ENST00000491467 TIMM10P62072 90 aa14.23□□□□□ -0.13
SRGAP3-210ENST00000491467 Q7L0L9 218 aa14.23□□□□□ -0.13
SRGAP3-210ENST00000491467 OTOP1Q7RTM1 612 aa14.23□□□□□ -0.13
SRGAP3-210ENST00000491467 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
SRGAP3-210ENST00000491467 TRPM4Q8TD43 1214 aa14.23□□□□□ -0.13
SRGAP3-210ENST00000491467 FAM227BQ96M60 508 aa14.23□□□□□ -0.13
SRGAP3-210ENST00000491467 ZNF652Q9Y2D9 606 aa14.23□□□□□ -0.13
SRGAP3-210ENST00000491467 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
SRGAP3-210ENST00000491467 TCHHQ07283 1943 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms