RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 ANKRD1Q15327 319 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 ZMYM1Q5SVZ6 1142 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 CCDC102BQ68D86 513 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 KCNB2Q92953 911 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 DSCC1Q9BVC3 393 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 COA1Q9GZY4 146 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 POLLQ9UGP5 575 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 RBM8AQ9Y5S9 174 aaKnown RBP12.24□□□□□ -0.45
HDAC3-210ENST00000490808 SNX14Q9Y5W7 946 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 CYP46A1Q9Y6A2 500 aa12.24□□□□□ -0.45
HDAC3-210ENST00000490808 MYH7P12883 1935 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 A0A0D9SFI3 127 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 VEGFAP15692 232 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-210ENST00000490808 ADORA1P30542 326 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 MAP3K12Q12852 859 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 NECTIN1Q15223 517 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 TSGA10IPQ3SY00 556 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-210ENST00000490808 OLFM4Q6UX06 510 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 ZNF804AQ7Z570 1209 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 VPS37DQ86XT2 251 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 GPC2Q8N158 579 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 APPBP2Q92624 585 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
HDAC3-210ENST00000490808 ZSCAN31Q96LW9 406 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-210ENST00000490808 COL4A1P02462 1669 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 MYH13Q9UKX3 1938 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 IQCA1LA6NCM1 817 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 SEMA3EO15041 775 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 TAF5LO75529 589 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 PDIA4P13667 645 aaKnown RBP12.22□□□□□ -0.45
HDAC3-210ENST00000490808 RPS12P25398 132 aaKnown RBP12.22□□□□□ -0.45
HDAC3-210ENST00000490808 ZAP70P43403 619 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 NUCB2P80303 420 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 PTH1RQ03431 593 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 AOC3Q16853 763 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 CREB3L3Q68CJ9 461 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 EDC3Q96F86 508 aaKnown RBP12.22□□□□□ -0.45
HDAC3-210ENST00000490808 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
HDAC3-210ENST00000490808 L3MBTL3Q96JM7 780 aaPredicted RBP12.22□□□□□ -0.45
HDAC3-210ENST00000490808 ANTXR1Q9H6X2 564 aa12.22□□□□□ -0.45
HDAC3-210ENST00000490808 MYO3BQ8WXR4 1341 aa12.21□□□□□ -0.45
HDAC3-210ENST00000490808 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.45
HDAC3-210ENST00000490808 UBE3CQ15386 1083 aa12.21□□□□□ -0.45
HDAC3-210ENST00000490808 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
HDAC3-210ENST00000490808 BLOC1S2Q6QNY1 142 aa12.21□□□□□ -0.45
HDAC3-210ENST00000490808 SPATA5Q8NB90 893 aa12.21□□□□□ -0.45
HDAC3-210ENST00000490808 HELBQ8NG08 1087 aaPredicted RBP12.21□□□□□ -0.45
HDAC3-210ENST00000490808 JAKMIP1Q96N16 626 aaKnown RBP12.21□□□□□ -0.45
HDAC3-210ENST00000490808 SH2B1Q9NRF2 756 aaPredicted RBP12.21□□□□□ -0.45
HDAC3-210ENST00000490808 DENND2AQ9ULE3 1009 aa12.21□□□□□ -0.45
HDAC3-210ENST00000490808 SLC27A2O14975 620 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 MCAMP43121 646 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 FKBP1AP62942 108 aaKnown RBP12.2□□□□□ -0.46
HDAC3-210ENST00000490808 CIAPIN1Q6FI81 312 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 RUFY3Q7L099 469 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 IL25Q9H293 177 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 ALDH8A1Q9H2A2 487 aaPredicted RBP12.2□□□□□ -0.46
HDAC3-210ENST00000490808 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 PALD1Q9ULE6 856 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
HDAC3-210ENST00000490808 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.2□□□□□ -0.46
HDAC3-210ENST00000490808 AKAP11Q9UKA4 1901 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 ECE2O60344 883 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 FRAT2O75474 233 aaPredicted RBP12.19□□□□□ -0.46
HDAC3-210ENST00000490808 IL1R1P14778 569 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 PHKA1P46020 1223 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 NBR1Q14596 966 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 SLC9C2Q5TAH2 1124 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 STRIP1Q5VSL9 837 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 AGBL3Q8NEM8 1001 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 DPF2Q92785 391 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
HDAC3-210ENST00000490808 NDUFB9Q9Y6M9 179 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 SCN9AQ15858 1988 aa12.19□□□□□ -0.46
HDAC3-210ENST00000490808 IRS2Q9Y4H2 1338 aa12.18□□□□□ -0.46
HDAC3-210ENST00000490808 IDH1O75874 414 aaKnown RBP12.18□□□□□ -0.46
HDAC3-210ENST00000490808 GNAT2P19087 354 aa12.18□□□□□ -0.46
HDAC3-210ENST00000490808 LMOD1P29536 600 aaPredicted RBP12.18□□□□□ -0.46
HDAC3-210ENST00000490808 HIBADHP31937 336 aaKnown RBP12.18□□□□□ -0.46
HDAC3-210ENST00000490808 ADD2P35612 726 aa12.18□□□□□ -0.46
HDAC3-210ENST00000490808 NFKBIBQ15653 356 aa12.18□□□□□ -0.46
HDAC3-210ENST00000490808 IMMTQ16891 758 aaKnown RBP12.18□□□□□ -0.46
HDAC3-210ENST00000490808 ZNF589Q86UQ0 364 aaPredicted RBP12.18□□□□□ -0.46
HDAC3-210ENST00000490808 TBC1D22AQ8WUA7 517 aa12.18□□□□□ -0.46
HDAC3-210ENST00000490808 TMX3Q96JJ7 454 aa12.18□□□□□ -0.46
HDAC3-210ENST00000490808 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
HDAC3-210ENST00000490808 LRP2BPQ9P2M1 347 aa12.18□□□□□ -0.46
HDAC3-210ENST00000490808 PDS5AQ29RF7 1337 aaKnown RBP12.17□□□□□ -0.46
HDAC3-210ENST00000490808 USP17L3A6NCW0 530 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 USP17L4A6NCW7 530 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 FOXN1O15353 648 aa12.17□□□□□ -0.46
HDAC3-210ENST00000490808 CD2BP2O95400 341 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms