RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TLR1Q15399 786 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 POTEAQ6S8J7 498 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 LYPD4Q6UWN0 246 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 DZIP1LQ8IYY4 767 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 INSM2Q96T92 566 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 BIN2Q9UBW5 565 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 USP25Q9UHP3 1055 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 KIAA1210Q9ULL0 1709 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 SPHKAPQ2M3C7 1700 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 CDK2AP1O14519 115 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 FKBP4Q02790 459 aaKnown RBP eCLIP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 PKP1Q13835 747 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 FAM26DQ5JW98 314 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 RNF214Q8ND24 703 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZNF397Q8NF99 534 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 KIF1BPQ96EK5 621 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 KCNF1Q9H3M0 494 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 TTC12Q9H892 705 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 QTRT2Q9H974 415 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 BCCIPQ9P287 314 aaKnown RBP eCLIP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 LRFN2Q9ULH4 789 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 NSFL1CQ9UNZ2 370 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 KIAA0556O60303 1618 aa5.68□□□□□ -1.5
CDC42BPA-213ENST00000488131 ABCC11Q96J66 1382 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 CDC45O75419 566 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 ADCY5O95622 1261 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 CELA2BP08218 269 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 NOP2P46087 812 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 RAD51AP2Q09MP3 1159 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 COX20Q5RI15 118 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 LYSMD3Q7Z3D4 306 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 CHD1LQ86WJ1 897 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 C17orf53Q8N3J3 647 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 STAG2Q8N3U4 1231 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 TMEM87AQ8NBN3 555 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 RNF217Q8TC41 542 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 HELQQ8TDG4 1101 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZNF622Q969S3 477 aaKnown RBP eCLIP5.67□□□□□ -1.56e-8■■□□□ 13
CDC42BPA-213ENST00000488131 CHMP4AQ9BY43 222 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZBTB40Q9NUA8 1239 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 INO80Q9ULG1 1556 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 ABCA6Q8N139 1617 aa5.67□□□□□ -1.5
CDC42BPA-213ENST00000488131 MEN1O00255 615 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 EML1O00423 815 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 TNFRSF10BO14763 440 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 NPR3P17342 541 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 GLYCTKQ8IVS8 523 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 BRMS1Q9HCU9 246 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 PYCARDQ9ULZ3 195 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 PAXBP1Q9Y5B6 917 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 PARP3Q9Y6F1 533 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 MYO3AQ8NEV4 1616 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 CNTNAP5Q8WYK1 1306 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 ADAMTS12P58397 1594 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 TRIM27P14373 513 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 PSMA6P60900 246 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 ALYREFQ86V81 257 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 NEDD1Q8NHV4 660 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 RUNDC1Q96C34 613 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 GCC1Q96CN9 775 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 MBIPQ9NS73 344 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 DISP1Q96F81 1524 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 PIK3R4Q99570 1358 aa5.66□□□□□ -1.5
CDC42BPA-213ENST00000488131 ERCC6Q03468 1493 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 IFT140Q96RY7 1462 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 MAST1Q9Y2H9 1570 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 PDS5BQ9NTI5 1447 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 GOLGA6L6A8MZA4 724 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 NOS2P35228 1153 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 HNRNPH2P55795 449 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 SF3B2Q13435 895 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 TEAD4Q15561 434 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 C16orf46Q6P387 395 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 NCAPGQ9BPX3 1015 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 FUCA2Q9BTY2 467 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 RASSF4Q9H2L5 321 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 SLC52A1Q9NWF4 448 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 HDAC5Q9UQL6 1122 aa5.65□□□□□ -1.5
CDC42BPA-213ENST00000488131 ZNF518AQ6AHZ1 1483 aa5.65□□□□□ -1.51
CDC42BPA-213ENST00000488131 UNCXA6NJT0 531 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 H7C1W4 665 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 ZBTB39O15060 712 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 DHX16O60231 1041 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 BCRP11274 1271 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 MPSTP25325 297 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 RBM6P78332 1123 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 CCDC183Q5T5S1 534 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 ICE2Q659A1 982 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 KLRG1Q96E93 195 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 MYCBPQ99417 103 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 GRIP2Q9C0E4 1043 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 AMOTL2Q9Y2J4 779 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 HCN4Q9Y3Q4 1203 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 NEURL4Q96JN8 1562 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 PPIP5K1Q6PFW1 1433 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 FURINP09958 794 aa5.64□□□□□ -1.51
CDC42BPA-213ENST00000488131 CUL4AQ13619 759 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms