RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 MSX1P28360 303 aa8.83□□□□□ -1
TNFSF4-203ENST00000488053 HOXC9P31274 260 aa8.83□□□□□ -1
TNFSF4-203ENST00000488053 AMPHP49418 695 aa8.83□□□□□ -1
TNFSF4-203ENST00000488053 RRS1Q15050 365 aaKnown RBP8.83□□□□□ -1
TNFSF4-203ENST00000488053 PGBD3Q8N328 593 aa8.83□□□□□ -1
TNFSF4-203ENST00000488053 SYT17Q9BSW7 474 aa8.83□□□□□ -1
TNFSF4-203ENST00000488053 MTFR1LQ9H019 292 aa8.83□□□□□ -1
TNFSF4-203ENST00000488053 TUBGCP6Q96RT7 1819 aa8.82□□□□□ -1
TNFSF4-203ENST00000488053 ITGA6P23229 1130 aa8.82□□□□□ -1
TNFSF4-203ENST00000488053 FKBP5Q13451 457 aaPredicted RBP8.82□□□□□ -1
TNFSF4-203ENST00000488053 C1orf53Q5VUE5 145 aa8.82□□□□□ -1
TNFSF4-203ENST00000488053 RIPOR1Q6ZS17 1223 aa8.82□□□□□ -1
TNFSF4-203ENST00000488053 USHBP1Q8N6Y0 703 aa8.82□□□□□ -1
TNFSF4-203ENST00000488053 GMCL1Q96IK5 515 aa8.82□□□□□ -1
TNFSF4-203ENST00000488053 GGNBP2Q9H3C7 697 aa8.82□□□□□ -1
TNFSF4-203ENST00000488053 GPAMQ9HCL2 828 aa8.82□□□□□ -1
TNFSF4-203ENST00000488053 GPC6Q9Y625 555 aaPredicted RBP8.82□□□□□ -1
TNFSF4-203ENST00000488053 MEGF6O75095 1541 aa8.81□□□□□ -1
TNFSF4-203ENST00000488053 H7C1W4 665 aa8.81□□□□□ -1
TNFSF4-203ENST00000488053 ATP4AP20648 1035 aa8.81□□□□□ -1
TNFSF4-203ENST00000488053 TXLNAP40222 546 aa8.81□□□□□ -1
TNFSF4-203ENST00000488053 SH3PXD2AQ5TCZ1 1133 aa8.81□□□□□ -1
TNFSF4-203ENST00000488053 COL26A1Q96A83 441 aa8.81□□□□□ -1
TNFSF4-203ENST00000488053 PUS7Q96PZ0 661 aaKnown RBP8.81□□□□□ -1
TNFSF4-203ENST00000488053 KIF20BQ96Q89 1820 aa8.81□□□□□ -1
TNFSF4-203ENST00000488053 CHD4Q14839 1912 aa8.81□□□□□ -1
TNFSF4-203ENST00000488053 CARNS1A5YM72 827 aa8.8□□□□□ -1
TNFSF4-203ENST00000488053 PTCD1O75127 700 aaKnown RBP8.8□□□□□ -1
TNFSF4-203ENST00000488053 SSFA2P28290 1259 aa8.8□□□□□ -1
TNFSF4-203ENST00000488053 LBRQ14739 615 aaKnown RBP8.8□□□□□ -1
TNFSF4-203ENST00000488053 ARSJQ5FYB0 599 aaPredicted RBP8.8□□□□□ -1
TNFSF4-203ENST00000488053 TRIM22Q8IYM9 498 aa8.8□□□□□ -1
TNFSF4-203ENST00000488053 ZCRB1Q8TBF4 217 aaKnown RBP8.8□□□□□ -1
TNFSF4-203ENST00000488053 PHACTR1Q9C0D0 580 aa8.8□□□□□ -1
TNFSF4-203ENST00000488053 CRISPLD1Q9H336 500 aa8.8□□□□□ -1
TNFSF4-203ENST00000488053 HCN4Q9Y3Q4 1203 aa8.8□□□□□ -1
TNFSF4-203ENST00000488053 ANKRD36BQ8N2N9 1353 aa8.8□□□□□ -1
TNFSF4-203ENST00000488053 LY75O60449 1722 aa8.8□□□□□ -1
TNFSF4-203ENST00000488053 NSD2O96028 1365 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 USP47Q96K76 1375 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 H3BM21 787 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 TERTO14746 1132 aaKnown RBP8.79□□□□□ -1
TNFSF4-203ENST00000488053 FYB1O15117 783 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 TMF1P82094 1093 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 EFHC2Q5JST6 749 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 NBPF6Q5VWK0 638 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 BICDL1Q6ZP65 573 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 ALDH16A1Q8IZ83 802 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 SLC16A10Q8TF71 515 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 NBPF4Q96M43 638 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 TFCP2L1Q9NZI6 479 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 QSER1Q2KHR3 1735 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 PNPLA7Q6ZV29 1317 aa8.79□□□□□ -1
TNFSF4-203ENST00000488053 HIF1AQ16665 826 aa8.78□□□□□ -1
TNFSF4-203ENST00000488053 RTN1Q16799 776 aa8.78□□□□□ -1
TNFSF4-203ENST00000488053 HSP90AB2PQ58FF8 381 aa8.78□□□□□ -1
TNFSF4-203ENST00000488053 RHPN1Q8TCX5 695 aa8.78□□□□□ -1
TNFSF4-203ENST00000488053 NUCKS1Q9H1E3 243 aaKnown RBP8.78□□□□□ -1
TNFSF4-203ENST00000488053 RUBCNLQ9H714 662 aa8.78□□□□□ -1
TNFSF4-203ENST00000488053 RTL1A6NKG5 1358 aa8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 POLD1P28340 1107 aa8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 GPR162Q16538 588 aa8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 NLRP8Q86W28 1048 aa8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 NANOS1Q8WY41 292 aaKnown RBP8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 RAPGEF4Q8WZA2 1011 aa8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 CUEDC1Q9NWM3 386 aaPredicted RBP8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 CCNL1Q9UK58 526 aaPredicted RBP8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 MTMR7Q9Y216 660 aa8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 SMG6Q86US8 1419 aaKnown RBP8.77□□□□□ -1.01
TNFSF4-203ENST00000488053 A0A1W2PNR3 127 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 VEGFBP49765 207 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 FOXR1Q6PIV2 292 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 SV2AQ7L0J3 742 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 ZNF837Q96EG3 531 aaPredicted RBP8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 MYO19Q96H55 970 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 ZIC5Q96T25 663 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 MKNK1Q9BUB5 465 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 TRAIPQ9BWF2 469 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 NEUROD4Q9HD90 331 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 ANKIB1Q9P2G1 1089 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 GJA3Q9Y6H8 435 aa8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 GOLGB1Q14789 3259 aaKnown RBP8.76□□□□□ -1.01
TNFSF4-203ENST00000488053 ITGB4P16144 1822 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 COL24A1Q17RW2 1714 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 CDC14CA4D256 554 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 PPM1GO15355 546 aaPredicted RBP8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 VSIG8P0DPA2 414 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 TRIM26Q12899 539 aaPredicted RBP8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 DBN1Q16643 649 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 MSL1Q68DK7 614 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 PHLDB3Q6NSJ2 640 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 FIGNL1Q6PIW4 674 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 NLGN2Q8NFZ4 835 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 C7orf43Q8WVR3 580 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 POLR3GLQ9BT43 218 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 C5P01031 1676 aa8.75□□□□□ -1.01
TNFSF4-203ENST00000488053 INSRP06213 1382 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 FLT4P35916 1363 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 MAP3K5Q99683 1374 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 TOGARAM1Q9Y4F4 1720 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms