RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 BCS1LQ9Y276 419 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 ANKRD36CQ5JPF3 1778 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 ADCY9O60503 1353 aa10.01□□□□□ -0.81
NECTIN3-209ENST00000488016 PCNTO95613 3336 aa10□□□□□ -0.81
NECTIN3-209ENST00000488016 NPHP1O15259 732 aa10□□□□□ -0.81
NECTIN3-209ENST00000488016 HNRNPUQ00839 825 aaKnown RBP eCLIP10□□□□□ -0.81
NECTIN3-209ENST00000488016 SLFN5Q08AF3 891 aa10□□□□□ -0.81
NECTIN3-209ENST00000488016 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
NECTIN3-209ENST00000488016 TNS4Q8IZW8 715 aa10□□□□□ -0.81
NECTIN3-209ENST00000488016 LRRN4Q8WUT4 740 aa10□□□□□ -0.81
NECTIN3-209ENST00000488016 JARID2Q92833 1246 aaPredicted RBP10□□□□□ -0.81
NECTIN3-209ENST00000488016 CACNA1SQ13698 1873 aa10□□□□□ -0.81
NECTIN3-209ENST00000488016 MAGEB6P1A0A0J9YX57 407 aa9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 NTSR2O95665 410 aa9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 WDR4P57081 412 aaKnown RBP9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 TGFB2P61812 414 aa9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 CCDC30Q5VVM6 783 aa9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 SH3BP5LQ7L8J4 393 aa9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 PCMTD1Q96MG8 357 aaPredicted RBP9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 MYD88Q99836 296 aa9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 BCL2L13Q9BXK5 485 aa9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 HYPKQ9NX55 129 aa9.99□□□□□ -0.81
NECTIN3-209ENST00000488016 DLEC1Q9Y238 1755 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 BMP1P13497 986 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 SNRPBP14678 240 aaKnown RBP9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 ST5P78524 1137 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 NR5A1Q13285 461 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 TCIRG1Q13488 830 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 OLFM4Q6UX06 510 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 NLRP10Q86W26 655 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 PLBD2Q8NHP8 589 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 ZNF622Q969S3 477 aaKnown RBP eCLIP9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 MAP3K2Q9Y2U5 619 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 COL4A1P02462 1669 aa9.98□□□□□ -0.81
NECTIN3-209ENST00000488016 PI4KAP2A4QPH2 592 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 E9PSI1 815 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 F6X3S4 739 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 HCLS1P14317 486 aaPredicted RBP9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 GTF2E1P29083 439 aaPredicted RBP9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 SH3RF1Q7Z6J0 888 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 PI4KAP1Q8N8J0 262 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 ISCA1Q9BUE6 129 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 BRIP1Q9BX63 1249 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 C1QTNF2Q9BXJ5 285 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 STK31Q9BXU1 1019 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 FKBPLQ9UIM3 349 aa9.97□□□□□ -0.81
NECTIN3-209ENST00000488016 LAMB2P55268 1798 aa9.96□□□□□ -0.81
NECTIN3-209ENST00000488016 SLX4Q8IY92 1834 aa9.96□□□□□ -0.81
NECTIN3-209ENST00000488016 H0YIN7 160 aa9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 RASSF7Q02833 373 aa9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 FLIIQ13045 1269 aa9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 CWF19L2Q2TBE0 894 aaKnown RBP9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 DALRD3Q5D0E6 543 aaKnown RBP9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 TPTE2Q6XPS3 522 aa9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 TRIM46Q7Z4K8 759 aa9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 TRMT2AQ8IZ69 625 aaKnown RBP9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 PNMA1Q8ND90 353 aa9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 FAM89AQ96GI7 184 aa9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 UTP14AQ9BVJ6 771 aaKnown RBP9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 GOPCQ9HD26 462 aa9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 PIM2Q9P1W9 311 aa9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 DDX60Q8IY21 1712 aaKnown RBP9.96□□□□□ -0.82
NECTIN3-209ENST00000488016 IGKV5-2P06315 115 aa9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 TIMP2P16035 220 aa9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 FKBP5Q13451 457 aaPredicted RBP9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 NR6A1Q15406 480 aa9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 PDXDC2PQ6P474 469 aa9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 VASH1Q7L8A9 365 aaPredicted RBP9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 TRMT44Q8IYL2 757 aaKnown RBP9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 SSH1Q8WYL5 1049 aa9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 ARHGAP9Q9BRR9 750 aa9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 TRMT112Q9UI30 125 aaKnown RBP9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 MAP4K5Q9Y4K4 846 aa9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 ZC3H4Q9UPT8 1303 aaKnown RBP9.95□□□□□ -0.82
NECTIN3-209ENST00000488016 TAF1P21675 1872 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 ARFGEF1Q9Y6D6 1849 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 IBTKQ9P2D0 1353 aaPredicted RBP9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 C21orf2O43822 256 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 SRGNP10124 158 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 FSHRP23945 695 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 PDE6BP35913 854 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 SCARF1Q14162 830 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 PARP10Q53GL7 1025 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 HSP90AB3PQ58FF7 597 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 TREML4Q6UXN2 200 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 KSR2Q6VAB6 950 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 ARHGAP27Q6ZUM4 889 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 IL27Q8NEV9 243 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 METTL22Q9BUU2 404 aaPredicted RBP9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 NYXQ9GZU5 481 aa9.94□□□□□ -0.82
NECTIN3-209ENST00000488016 KLRG2A4D1S0 409 aaPredicted RBP9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 ZIC2O95409 532 aaPredicted RBP9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 USP17L8P0C7I0 530 aa9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 RFC5P40937 340 aa9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 PRPF40BQ6NWY9 871 aaKnown RBP9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 MRPL14Q6P1L8 145 aaKnown RBP9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 PPP1R42Q7Z4L9 355 aa9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 TTLL6Q8N841 843 aa9.93□□□□□ -0.82
NECTIN3-209ENST00000488016 JMYQ8N9B5 988 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms