RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 PODXL2Q9NZ53 605 aa24.11■■□□□ 1.45
PHF1-209ENST00000487667 IRS2Q9Y4H2 1338 aa24.1■■□□□ 1.45
PHF1-209ENST00000487667 MBD4O95243 580 aa24.1■■□□□ 1.45
PHF1-209ENST00000487667 SKOR2Q2VWA4 1001 aaPredicted RBP24.1■■□□□ 1.45
PHF1-209ENST00000487667 RALYLQ86SE5 291 aaKnown RBP24.1■■□□□ 1.45
PHF1-209ENST00000487667 CYP7A1P22680 504 aa24.1■■□□□ 1.45
PHF1-209ENST00000487667 CCDC83Q8IWF9 413 aa24.1■■□□□ 1.45
PHF1-209ENST00000487667 MYH13Q9UKX3 1938 aa24.09■■□□□ 1.45
PHF1-209ENST00000487667 SALL1Q9NSC2 1324 aa24.09■■□□□ 1.45
PHF1-209ENST00000487667 PDCP20941 246 aa24.09■■□□□ 1.45
PHF1-209ENST00000487667 MCM5P33992 734 aa24.09■■□□□ 1.45
PHF1-209ENST00000487667 TTLL5Q6EMB2 1281 aa24.09■■□□□ 1.45
PHF1-209ENST00000487667 WDR66Q8TBY9 1149 aa24.09■■□□□ 1.45
PHF1-209ENST00000487667 NAPBQ9H115 298 aa24.09■■□□□ 1.45
PHF1-209ENST00000487667 GGA1Q9UJY5 639 aa24.09■■□□□ 1.45
PHF1-209ENST00000487667 IQSEC3Q9UPP2 1182 aaPredicted RBP24.09■■□□□ 1.45
PHF1-209ENST00000487667 BAG4O95429 457 aaKnown RBP24.08■■□□□ 1.45
PHF1-209ENST00000487667 ALDH1B1P30837 517 aa24.08■■□□□ 1.45
PHF1-209ENST00000487667 COL1A1P02452 1464 aaPredicted RBP24.08■■□□□ 1.45
PHF1-209ENST00000487667 NPR1P16066 1061 aa24.08■■□□□ 1.44
PHF1-209ENST00000487667 MSL1Q68DK7 614 aa24.08■■□□□ 1.44
PHF1-209ENST00000487667 NAA16Q6N069 864 aaPredicted RBP24.08■■□□□ 1.44
PHF1-209ENST00000487667 SP8Q8IXZ3 490 aa24.08■■□□□ 1.44
PHF1-209ENST00000487667 DUOX1Q9NRD9 1551 aa24.07■■□□□ 1.44
PHF1-209ENST00000487667 LAMA4Q16363 1823 aa24.07■■□□□ 1.44
PHF1-209ENST00000487667 MAGEB6P1A0A0J9YX57 407 aa24.07■■□□□ 1.44
PHF1-209ENST00000487667 LARGE1O95461 756 aa24.07■■□□□ 1.44
PHF1-209ENST00000487667 IFNL3Q8IZI9 196 aa24.07■■□□□ 1.44
PHF1-209ENST00000487667 UPF1Q92900 1129 aaKnown RBP eCLIP24.07■■□□□ 1.447e-8■■■□□ 14.7
PHF1-209ENST00000487667 ATP6V1DQ9Y5K8 247 aa24.06■■□□□ 1.44
PHF1-209ENST00000487667 TDRD7Q8NHU6 1098 aaKnown RBP24.06■■□□□ 1.44
PHF1-209ENST00000487667 ZNF274Q96GC6 653 aaPredicted RBP24.06■■□□□ 1.44
PHF1-209ENST00000487667 TCEANC2Q96MN5 208 aa24.06■■□□□ 1.44
PHF1-209ENST00000487667 LARP6Q9BRS8 491 aaKnown RBP24.06■■□□□ 1.44
PHF1-209ENST00000487667 LLPHQ9BRT6 129 aaKnown RBP24.06■■□□□ 1.44
PHF1-209ENST00000487667 TMX4Q9H1E5 349 aaPredicted RBP24.06■■□□□ 1.44
PHF1-209ENST00000487667 CNNM2Q9H8M5 875 aa24.06■■□□□ 1.44
PHF1-209ENST00000487667 ARMT1Q9H993 441 aa24.06■■□□□ 1.44
PHF1-209ENST00000487667 NSFL1CQ9UNZ2 370 aaKnown RBP24.06■■□□□ 1.44
PHF1-209ENST00000487667 SLC4A4Q9Y6R1 1079 aa24.06■■□□□ 1.44
PHF1-209ENST00000487667 QSER1Q2KHR3 1735 aa24.05■■□□□ 1.44
PHF1-209ENST00000487667 WTIPA6NIX2 430 aaPredicted RBP24.05■■□□□ 1.44
PHF1-209ENST00000487667 MMP10P09238 476 aa24.05■■□□□ 1.44
PHF1-209ENST00000487667 KLRK1P26718 216 aa24.05■■□□□ 1.44
PHF1-209ENST00000487667 GPSM2P81274 684 aa24.05■■□□□ 1.44
PHF1-209ENST00000487667 GIMAP6Q6P9H5 292 aa24.05■■□□□ 1.44
PHF1-209ENST00000487667 BRF1Q92994 677 aa24.05■■□□□ 1.44
PHF1-209ENST00000487667 GTF3C6Q969F1 213 aa24.05■■□□□ 1.44
PHF1-209ENST00000487667 ZDHHC9Q9Y397 364 aa24.05■■□□□ 1.44
PHF1-209ENST00000487667 GJB2P29033 226 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 EVCP57679 992 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 HAND2P61296 217 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 MB21D2Q8IYB1 491 aaPredicted RBP24.04■■□□□ 1.44
PHF1-209ENST00000487667 LRRC37AA6NMS7 1700 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 MAST2Q6P0Q8 1798 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 GSG1L2A8MUP6 293 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 PPEF1O14829 653 aaPredicted RBP24.04■■□□□ 1.44
PHF1-209ENST00000487667 PFKFB2O60825 505 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 UFL1O94874 794 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 SRGNP10124 158 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 PKP1Q13835 747 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 KIF3AQ9Y496 699 aa24.04■■□□□ 1.44
PHF1-209ENST00000487667 STX6O43752 255 aa24.03■■□□□ 1.44
PHF1-209ENST00000487667 TDO2P48775 406 aa24.03■■□□□ 1.44
PHF1-209ENST00000487667 LCORLQ8N3X6 602 aa24.03■■□□□ 1.44
PHF1-209ENST00000487667 NSUN4Q96CB9 384 aaKnown RBP24.03■■□□□ 1.44
PHF1-209ENST00000487667 RNF41Q9H4P4 317 aaPredicted RBP24.03■■□□□ 1.44
PHF1-209ENST00000487667 ATP6V0A2Q9Y487 856 aa24.03■■□□□ 1.44
PHF1-209ENST00000487667 CACNA1SQ13698 1873 aa24.03■■□□□ 1.44
PHF1-209ENST00000487667 GSTO1P78417 241 aa24.02■■□□□ 1.44
PHF1-209ENST00000487667 CERS3Q8IU89 383 aa24.02■■□□□ 1.44
PHF1-209ENST00000487667 MASTLQ96GX5 879 aa24.02■■□□□ 1.44
PHF1-209ENST00000487667 KRT23Q9C075 422 aa24.02■■□□□ 1.44
PHF1-209ENST00000487667 PDGFDQ9GZP0 370 aaPredicted RBP24.02■■□□□ 1.44
PHF1-209ENST00000487667 TRAK2O60296 914 aa24.02■■□□□ 1.44
PHF1-209ENST00000487667 NECAB1Q8N987 351 aa24.02■■□□□ 1.44
PHF1-209ENST00000487667 MTA3Q9BTC8 594 aa24.02■■□□□ 1.44
PHF1-209ENST00000487667 ANKRD31Q8N7Z5 1873 aa24.01■■□□□ 1.43
PHF1-209ENST00000487667 SOCS7O14512 581 aa24.01■■□□□ 1.43
PHF1-209ENST00000487667 PRC1O43663 620 aa24.01■■□□□ 1.43
PHF1-209ENST00000487667 SYT1P21579 422 aa24.01■■□□□ 1.43
PHF1-209ENST00000487667 CHAF1AQ13111 956 aaPredicted RBP24.01■■□□□ 1.43
PHF1-209ENST00000487667 TXNRD3Q86VQ6 643 aa24.01■■□□□ 1.43
PHF1-209ENST00000487667 TMEM87BQ96K49 555 aa24.01■■□□□ 1.43
PHF1-209ENST00000487667 RIOK1Q9BRS2 568 aaKnown RBP24.01■■□□□ 1.43
PHF1-209ENST00000487667 CCDC88AQ3V6T2 1871 aa24.01■■□□□ 1.43
PHF1-209ENST00000487667 ZSCAN22P10073 491 aaPredicted RBP24■■□□□ 1.43
PHF1-209ENST00000487667 IL1R1P14778 569 aa24■■□□□ 1.43
PHF1-209ENST00000487667 ST3GAL1Q11201 340 aa24■■□□□ 1.43
PHF1-209ENST00000487667 COL9A3Q14050 684 aaPredicted RBP24■■□□□ 1.43
PHF1-209ENST00000487667 MIGA1Q8NAN2 632 aa24■■□□□ 1.43
PHF1-209ENST00000487667 EPB41L4AQ9HCS5 686 aaPredicted RBP24■■□□□ 1.43
PHF1-209ENST00000487667 TIAM2Q8IVF5 1701 aa24■■□□□ 1.43
PHF1-209ENST00000487667 A0A0G2JLW4 131 aa24■■□□□ 1.43
PHF1-209ENST00000487667 DHX16O60231 1041 aaKnown RBP24■■□□□ 1.43
PHF1-209ENST00000487667 PCP11498 1178 aaKnown RBP24■■□□□ 1.43
PHF1-209ENST00000487667 HMGN5P82970 282 aaKnown RBP24■■□□□ 1.43
PHF1-209ENST00000487667 MECOMQ03112 1051 aa24■■□□□ 1.43
PHF1-209ENST00000487667 DZIP1Q86YF9 867 aaKnown RBP24■■□□□ 1.43
PHF1-209ENST00000487667 TBC1D16Q8TBP0 767 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms