RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 FOXR1Q6PIV2 292 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 VWA5B2Q8N398 1253 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 TRERF1Q96PN7 1200 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 PNMA5Q96PV4 448 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 ZFYVE28Q9HCC9 887 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 PARP2Q9UGN5 583 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 HCN2Q9UL51 889 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 ATXN7L1Q9ULK2 861 aaPredicted RBP8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 TBX22Q9Y458 520 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 MYO5BQ9ULV0 1848 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 PLEKHG1Q9ULL1 1385 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 POLR1AO95602 1720 aaPredicted RBP8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 GPR25O00155 361 aa8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 FGFR3P22607 806 aa8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 RXRBP28702 533 aa8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 SPEM2Q0P670 501 aa8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 C1orf127Q8N9H9 656 aa8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 RNF19AQ9NV58 838 aa8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 CNTN3Q9P232 1028 aa8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 UTRNP46939 3433 aa8.85□□□□□ -0.99
RTFDC1-209ENST00000487211 RARAP10276 462 aa8.84□□□□□ -0.99
RTFDC1-209ENST00000487211 ADAMTS13Q76LX8 1427 aa8.84□□□□□ -0.99
RTFDC1-209ENST00000487211 SV2AQ7L0J3 742 aa8.84□□□□□ -0.99
RTFDC1-209ENST00000487211 FAM161BQ96MY7 647 aa8.84□□□□□ -0.99
RTFDC1-209ENST00000487211 SLC30A3Q99726 388 aa8.84□□□□□ -0.99
RTFDC1-209ENST00000487211 CFHR5Q9BXR6 569 aa8.84□□□□□ -0.99
RTFDC1-209ENST00000487211 POLR3DP05423 398 aaPredicted RBP8.83□□□□□ -1
RTFDC1-209ENST00000487211 KCNA6P17658 529 aa8.83□□□□□ -1
RTFDC1-209ENST00000487211 NFKB1P19838 968 aa8.83□□□□□ -1
RTFDC1-209ENST00000487211 RAB44Q7Z6P3 723 aaPredicted RBP8.83□□□□□ -1
RTFDC1-209ENST00000487211 FBF1Q8TES7 1133 aa8.83□□□□□ -1
RTFDC1-209ENST00000487211 BHMTQ93088 406 aa8.83□□□□□ -1
RTFDC1-209ENST00000487211 CCDC74AQ96AQ1 378 aa8.83□□□□□ -1
RTFDC1-209ENST00000487211 CHRDQ9H2X0 955 aa8.83□□□□□ -1
RTFDC1-209ENST00000487211 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.83□□□□□ -1
RTFDC1-209ENST00000487211 NEXMIFQ5QGS0 1516 aa8.83□□□□□ -1
RTFDC1-209ENST00000487211 ROBO1Q9Y6N7 1651 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 FAM135BQ49AJ0 1406 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 EREGO14944 169 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 CES1P23141 567 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 PSMD2Q13200 908 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 PMEPA1Q969W9 287 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 MRS2Q9HD23 443 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 ZFATQ9P243 1243 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 METP08581 1390 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 KIF1BO60333 1816 aa8.82□□□□□ -1
RTFDC1-209ENST00000487211 MMP20O60882 483 aa8.81□□□□□ -1
RTFDC1-209ENST00000487211 DAB2P98082 770 aa8.81□□□□□ -1
RTFDC1-209ENST00000487211 CTBSQ01459 385 aa8.81□□□□□ -1
RTFDC1-209ENST00000487211 ZNF772Q68DY9 489 aaPredicted RBP8.81□□□□□ -1
RTFDC1-209ENST00000487211 TMEM132EQ6IEE7 984 aa8.81□□□□□ -1
RTFDC1-209ENST00000487211 C14orf93Q9H972 538 aaKnown RBP8.81□□□□□ -1
RTFDC1-209ENST00000487211 KANSL3Q9P2N6 904 aa8.81□□□□□ -1
RTFDC1-209ENST00000487211 IQGAP1P46940 1657 aa8.81□□□□□ -1
RTFDC1-209ENST00000487211 PTPRUQ92729 1446 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 PHF20L1A8MW92 1017 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 CYP2E1P05181 493 aaPredicted RBP8.8□□□□□ -1
RTFDC1-209ENST00000487211 VAMP1P23763 118 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 GNA15P30679 374 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 IRS1P35568 1242 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 VEGFBP49765 207 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.8□□□□□ -1
RTFDC1-209ENST00000487211 FAM182BQ5T319 152 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 PI16Q6UXB8 463 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 TMC4Q7Z404 712 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 OR13H1Q8NG92 308 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 EPS8L3Q8TE67 593 aaKnown RBP8.8□□□□□ -1
RTFDC1-209ENST00000487211 NANOS1Q8WY41 292 aaKnown RBP8.8□□□□□ -1
RTFDC1-209ENST00000487211 EFCC1Q9HA90 598 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 NLRP2Q9NX02 1062 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 PRR12Q9ULL5 1215 aa8.8□□□□□ -1
RTFDC1-209ENST00000487211 SORBS3O60504 671 aa8.79□□□□□ -1
RTFDC1-209ENST00000487211 PSAPP07602 524 aa8.79□□□□□ -1
RTFDC1-209ENST00000487211 MRPL58Q14197 206 aaKnown RBP8.79□□□□□ -1
RTFDC1-209ENST00000487211 NPHS2Q9NP85 383 aa8.79□□□□□ -1
RTFDC1-209ENST00000487211 SPG7Q9UQ90 795 aa8.79□□□□□ -1
RTFDC1-209ENST00000487211 TSNAXIP1Q2TAA8 658 aa8.78□□□□□ -1
RTFDC1-209ENST00000487211 GALNT12Q8IXK2 581 aa8.78□□□□□ -1
RTFDC1-209ENST00000487211 TLR7Q9NYK1 1049 aaKnown RBP8.78□□□□□ -1
RTFDC1-209ENST00000487211 NXF1Q9UBU9 619 aaKnown RBP8.78□□□□□ -1
RTFDC1-209ENST00000487211 VTI1BQ9UEU0 232 aa8.78□□□□□ -1
RTFDC1-209ENST00000487211 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.78□□□□□ -1
RTFDC1-209ENST00000487211 PIK3R4Q99570 1358 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 NRXN3Q9Y4C0 1643 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 GADD45BO75293 160 aaPredicted RBP8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 MAP3K6O95382 1288 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 RECKO95980 971 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 BMP4P12644 408 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 NBPF8Q3BBV2 869 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 DHX32Q7L7V1 743 aaKnown RBP8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 FRMD6Q96NE9 622 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 STK26Q9P289 416 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 CAMTA1Q9Y6Y1 1673 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 PIK3C2GO75747 1445 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 NRXN1Q9ULB1 1477 aa8.77□□□□□ -1.01
RTFDC1-209ENST00000487211 PPLO60437 1756 aa8.76□□□□□ -1.01
RTFDC1-209ENST00000487211 PLAURQ03405 335 aa8.76□□□□□ -1.01
RTFDC1-209ENST00000487211 HYAL2Q12891 473 aa8.76□□□□□ -1.01
RTFDC1-209ENST00000487211 NCAPG2Q86XI2 1143 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms