RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ZNF594Q96JF6 807 aaPredicted RBP14.13□□□□□ -0.15
COL3A1-206ENST00000487010 TIGD1Q96MW7 591 aa14.13□□□□□ -0.15
COL3A1-206ENST00000487010 HSD3B7Q9H2F3 369 aa14.13□□□□□ -0.15
COL3A1-206ENST00000487010 GJB4Q9NTQ9 266 aa14.13□□□□□ -0.15
COL3A1-206ENST00000487010 CPLX1O14810 134 aa14.13□□□□□ -0.15
COL3A1-206ENST00000487010 CYP27B1O15528 508 aa14.13□□□□□ -0.15
COL3A1-206ENST00000487010 WDHD1O75717 1129 aaPredicted RBP14.13□□□□□ -0.15
COL3A1-206ENST00000487010 FGAP02671 866 aa14.13□□□□□ -0.15
COL3A1-206ENST00000487010 SLC39A14Q15043 492 aa14.13□□□□□ -0.15
COL3A1-206ENST00000487010 RGS22Q8NE09 1264 aa14.13□□□□□ -0.15
COL3A1-206ENST00000487010 ATG3Q9NT62 314 aa14.13□□□□□ -0.15
COL3A1-206ENST00000487010 TJP1Q07157 1748 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 GLI3P10071 1580 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 NBPF26B4DH59 902 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 CABP4P57796 275 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 ANTXR2P58335 489 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 ETF1P62495 437 aaKnown RBP14.12□□□□□ -0.15
COL3A1-206ENST00000487010 FKBP4Q02790 459 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL3A1-206ENST00000487010 NBPF14Q5TI25 921 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 NBPF10Q6P3W6 841 aaKnown RBP14.12□□□□□ -0.15
COL3A1-206ENST00000487010 HOMER1Q86YM7 354 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 NBPF15Q8N660 670 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 NCOA7Q8NI08 942 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 TUBE1Q9UJT0 475 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 C4AP0C0L4 1744 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 C4BP0C0L5 1744 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 MROH7-TTC4A0A0A0MT08 1334 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 PHLPP2Q6ZVD8 1323 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 ZNF142P52746 1687 aaPredicted RBP14.12□□□□□ -0.15
COL3A1-206ENST00000487010 NUP188Q5SRE5 1749 aa14.12□□□□□ -0.15
COL3A1-206ENST00000487010 ZFYP08048 801 aaPredicted RBP14.11□□□□□ -0.15
COL3A1-206ENST00000487010 ATP1A3P13637 1013 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 FAM193AP78312 1265 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 WASHC4Q2M389 1173 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 ISM2Q6H9L7 571 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 PUS3Q9BZE2 481 aaKnown RBP14.11□□□□□ -0.15
COL3A1-206ENST00000487010 MST1RQ04912 1400 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 CBFA2T2O43439 604 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 MARCKSP29966 332 aaPredicted RBP14.11□□□□□ -0.15
COL3A1-206ENST00000487010 SYKP43405 635 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 CLCN6P51797 869 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 TTLL7Q6ZT98 887 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 RAB11FIP4Q86YS3 637 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 TMX1Q9H3N1 280 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 CEP126Q9P2H0 1117 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 HPSEQ9Y251 543 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 FHOD1Q9Y613 1164 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 WDR19Q8NEZ3 1342 aa14.11□□□□□ -0.15
COL3A1-206ENST00000487010 UBASH3AP57075 661 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 ARHGAP29Q52LW3 1261 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 CCDC158Q5M9N0 1113 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 TRIM65Q6PJ69 517 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 RALYLQ86SE5 291 aaKnown RBP14.1□□□□□ -0.15
COL3A1-206ENST00000487010 DPF2Q92785 391 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 ST7Q9NRC1 585 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 DNAI1Q9UI46 699 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 ALS2Q96Q42 1657 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 PPP6R2O75170 966 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 MYL5Q02045 173 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 TTC39AQ5SRH9 613 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 CCDC191Q8NCU4 936 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 APPBP2Q92624 585 aa14.1□□□□□ -0.15
COL3A1-206ENST00000487010 CPDO75976 1380 aa14.09□□□□□ -0.15
COL3A1-206ENST00000487010 PLEKHG2Q9H7P9 1386 aa14.09□□□□□ -0.15
COL3A1-206ENST00000487010 ZNF213O14771 459 aa14.09□□□□□ -0.15
COL3A1-206ENST00000487010 SERPINC1P01008 464 aa14.09□□□□□ -0.15
COL3A1-206ENST00000487010 CSB-PGBD3P0DP91 1061 aa14.09□□□□□ -0.15
COL3A1-206ENST00000487010 SHC4Q6S5L8 630 aa14.09□□□□□ -0.15
COL3A1-206ENST00000487010 CREBRFQ8IUR6 639 aa14.09□□□□□ -0.15
COL3A1-206ENST00000487010 REXO1L1PQ8IX06 675 aa14.09□□□□□ -0.15
COL3A1-206ENST00000487010 PKD1L3Q7Z443 1732 aa14.09□□□□□ -0.15
COL3A1-206ENST00000487010 COL18A1P39060 1754 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 FAM237AA0A1B0GTK4 181 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 ADORA1P30542 326 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 PTPAQ15257 358 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 GORABQ5T7V8 394 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 FCHSD1Q86WN1 690 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 VSTM4Q8IW00 320 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 JMYQ8N9B5 988 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 XAGE2Q96GT9 111 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 ALG1Q9BT22 464 aa14.08□□□□□ -0.15
COL3A1-206ENST00000487010 SRRTQ9BXP5 876 aaKnown RBP14.08□□□□□ -0.15
COL3A1-206ENST00000487010 PUS7LQ9H0K6 701 aaKnown RBP14.08□□□□□ -0.15
COL3A1-206ENST00000487010 C1orf167Q5SNV9 1468 aa14.08□□□□□ -0.16
COL3A1-206ENST00000487010 ZMYM6O95789 1325 aa14.08□□□□□ -0.16
COL3A1-206ENST00000487010 CCDC66A2RUB6 948 aa14.08□□□□□ -0.16
COL3A1-206ENST00000487010 MYO1BO43795 1136 aa14.08□□□□□ -0.16
COL3A1-206ENST00000487010 PNMA6AP0CW24 399 aaPredicted RBP14.08□□□□□ -0.16
COL3A1-206ENST00000487010 CFAP100Q494V2 611 aa14.08□□□□□ -0.16
COL3A1-206ENST00000487010 UBXN4Q92575 508 aa14.08□□□□□ -0.16
COL3A1-206ENST00000487010 NOL10Q9BSC4 688 aaKnown RBP14.08□□□□□ -0.16
COL3A1-206ENST00000487010 AKAP2Q9Y2D5 859 aa14.08□□□□□ -0.16
COL3A1-206ENST00000487010 ZRANB2O95218 330 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL3A1-206ENST00000487010 PNOCQ13519 176 aa14.07□□□□□ -0.16
COL3A1-206ENST00000487010 SCARF1Q14162 830 aa14.07□□□□□ -0.16
COL3A1-206ENST00000487010 RESP18Q5W5W9 173 aa14.07□□□□□ -0.16
COL3A1-206ENST00000487010 VPS37DQ86XT2 251 aa14.07□□□□□ -0.16
COL3A1-206ENST00000487010 AIFM3Q96NN9 605 aa14.07□□□□□ -0.16
COL3A1-206ENST00000487010 MAP3K14Q99558 947 aa14.07□□□□□ -0.16
COL3A1-206ENST00000487010 UTP14AQ9BVJ6 771 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms