RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 RHOBTB3O94955 611 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 IRX5P78411 483 aaPredicted RBP7.44□□□□□ -1.22
KPNA1-208ENST00000485027 TCIRG1Q13488 830 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 GFOD2Q3B7J2 385 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 AKAP4Q5JQC9 854 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 HYIQ5T013 277 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 LHFPL2Q6ZUX7 228 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 EPS8L3Q8TE67 593 aaKnown RBP7.44□□□□□ -1.22
KPNA1-208ENST00000485027 SLC39A7Q92504 469 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 MTMR8Q96EF0 704 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 SERINC2Q96SA4 455 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 TRIM56Q9BRZ2 755 aaKnown RBP7.44□□□□□ -1.22
KPNA1-208ENST00000485027 YIPF4Q9BSR8 244 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 C2orf49Q9BVC5 232 aaPredicted RBP7.44□□□□□ -1.22
KPNA1-208ENST00000485027 ZNF180Q9UJW8 692 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 FBXO2Q9UK22 296 aaPredicted RBP7.44□□□□□ -1.22
KPNA1-208ENST00000485027 GPSM3Q9Y4H4 160 aa7.44□□□□□ -1.22
KPNA1-208ENST00000485027 PCF11O94913 1555 aaKnown RBP7.44□□□□□ -1.22
KPNA1-208ENST00000485027 A0A1W2PRU2 124 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 FIBPO43427 364 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 NBPF7P0C2Y1 421 aaPredicted RBP7.43□□□□□ -1.22
KPNA1-208ENST00000485027 TNS4Q8IZW8 715 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 PJA1Q8NG27 643 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 ZNF622Q969S3 477 aaKnown RBP eCLIP7.43□□□□□ -1.224e-7■□□□□ 9.2
KPNA1-208ENST00000485027 STRBPQ96SI9 672 aaKnown RBP7.43□□□□□ -1.22
KPNA1-208ENST00000485027 RHOBTB2Q9BYZ6 727 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 SAGE1Q9NXZ1 904 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 ISY1Q9ULR0 285 aaKnown RBP7.43□□□□□ -1.22
KPNA1-208ENST00000485027 ATP10BO94823 1461 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 KDM6BO15054 1643 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 HECW1Q76N89 1606 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 ABCA9Q8IUA7 1624 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 CBFA2T2O43439 604 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 TNFAIP3P21580 790 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 SOX5P35711 763 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 EIF4A3P38919 411 aaKnown RBP7.43□□□□□ -1.22
KPNA1-208ENST00000485027 PICALMQ13492 652 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 CDC37Q16543 378 aaPredicted RBP7.43□□□□□ -1.22
KPNA1-208ENST00000485027 PCNX4Q63HM2 1172 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 KIAA1958Q8N8K9 716 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 ZNF296Q8WUU4 475 aaPredicted RBP7.43□□□□□ -1.22
KPNA1-208ENST00000485027 ATXN2LQ8WWM7 1075 aaKnown RBP7.43□□□□□ -1.22
KPNA1-208ENST00000485027 SARGQ9BW04 601 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 SRRTQ9BXP5 876 aaKnown RBP7.43□□□□□ -1.22
KPNA1-208ENST00000485027 PCDHGA4Q9Y5G9 962 aa7.43□□□□□ -1.22
KPNA1-208ENST00000485027 MORC2Q9Y6X9 1032 aaPredicted RBP7.43□□□□□ -1.22
KPNA1-208ENST00000485027 ATAD2Q6PL18 1390 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 A6NCN8 305 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 A6NHS1 94 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 APAF1O14727 1248 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 EYA4O95677 639 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 PDGFAP04085 211 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 BCAMP50895 628 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 CCDC92Q53HC0 331 aaPredicted RBP7.42□□□□□ -1.22
KPNA1-208ENST00000485027 PERM1Q5SV97 790 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 PDXDC2PQ6P474 469 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 SYNPOQ8N3V7 929 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 EDEM1Q92611 657 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 TRIM8Q9BZR9 551 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 TSPAN10Q9H1Z9 355 aaPredicted RBP7.42□□□□□ -1.22
KPNA1-208ENST00000485027 UBP1Q9NZI7 540 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 FAM8A1Q9UBU6 413 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 PPT2Q9UMR5 302 aa7.42□□□□□ -1.22
KPNA1-208ENST00000485027 GSG1L2A8MUP6 293 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 AGR2O95994 175 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 DEKP35659 375 aaKnown RBP7.41□□□□□ -1.22
KPNA1-208ENST00000485027 ITKQ08881 620 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 NEUROD1Q13562 356 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 PUM3Q15397 648 aaKnown RBP7.41□□□□□ -1.22
KPNA1-208ENST00000485027 CFAP161Q6P656 301 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 FBXL19Q6PCT2 694 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 MSL3Q8N5Y2 521 aaKnown RBP7.41□□□□□ -1.22
KPNA1-208ENST00000485027 NELL1Q92832 810 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 SCLT1Q96NL6 688 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 HERPUD2Q9BSE4 406 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 CNNM2Q9H8M5 875 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 ATG3Q9NT62 314 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 HCN4Q9Y3Q4 1203 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 CDK13Q14004 1512 aaKnown RBP7.41□□□□□ -1.22
KPNA1-208ENST00000485027 A0A1W2PRQ8 180 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 CLGNO14967 610 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 SNX2O60749 519 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 STAU1O95793 577 aaKnown RBP7.41□□□□□ -1.22
KPNA1-208ENST00000485027 DGKGP49619 791 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 TNNI3KQ59H18 835 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 PPP4R3AQ6IN85 833 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 MMS22LQ6ZRQ5 1243 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 NELL2Q99435 816 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 SEZ6LQ9BYH1 1024 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 PLCB1Q9NQ66 1216 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 GTF2IRD1Q9UHL9 959 aa7.41□□□□□ -1.22
KPNA1-208ENST00000485027 LMTK3Q96Q04 1460 aa7.4□□□□□ -1.22
KPNA1-208ENST00000485027 TMEM229AB2RXF0 380 aa7.4□□□□□ -1.23
KPNA1-208ENST00000485027 RENBPP51606 427 aa7.4□□□□□ -1.23
KPNA1-208ENST00000485027 ANKRD23Q86SG2 305 aa7.4□□□□□ -1.23
KPNA1-208ENST00000485027 ZNF354CQ86Y25 554 aa7.4□□□□□ -1.23
KPNA1-208ENST00000485027 RELL1Q8IUW5 271 aa7.4□□□□□ -1.23
KPNA1-208ENST00000485027 TPH2Q8IWU9 490 aa7.4□□□□□ -1.23
KPNA1-208ENST00000485027 SNRNP27Q8WVK2 155 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms