RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
KPNA1-208ENST00000485027 AEBP2Q6ZN18 517 aaPredicted RBP14□□□□□ -0.17
KPNA1-208ENST00000485027 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
KPNA1-208ENST00000485027 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
KPNA1-208ENST00000485027 PHF23Q9BUL5 403 aaPredicted RBP13.28□□□□□ -0.28
KPNA1-208ENST00000485027 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
KPNA1-208ENST00000485027 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
KPNA1-208ENST00000485027 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
KPNA1-208ENST00000485027 KCNA4P22459 653 aa12.58□□□□□ -0.4
KPNA1-208ENST00000485027 AMER1Q5JTC6 1135 aaPredicted RBP12.4□□□□□ -0.42
KPNA1-208ENST00000485027 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.46
KPNA1-208ENST00000485027 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
KPNA1-208ENST00000485027 DAXXQ9UER7 740 aaPredicted RBP12□□□□□ -0.49
KPNA1-208ENST00000485027 PRKCSHP14314 528 aaPredicted RBP11.93□□□□□ -0.5
KPNA1-208ENST00000485027 ADRA2BP18089 450 aa11.91□□□□□ -0.5
KPNA1-208ENST00000485027 ZBTB22O15209 634 aa11.69□□□□□ -0.54
KPNA1-208ENST00000485027 TAOK2Q9UL54 1235 aa11.6□□□□□ -0.55
KPNA1-208ENST00000485027 TIMELESSQ9UNS1 1208 aa11.56□□□□□ -0.56
KPNA1-208ENST00000485027 ARXQ96QS3 562 aa11.53□□□□□ -0.56
KPNA1-208ENST00000485027 BCANQ96GW7 911 aa11.49□□□□□ -0.57
KPNA1-208ENST00000485027 PLCB2Q00722 1185 aa11.44□□□□□ -0.58
KPNA1-208ENST00000485027 TPRNQ4KMQ1 711 aa11.41□□□□□ -0.58
KPNA1-208ENST00000485027 SENP3Q9H4L4 574 aaPredicted RBP11.41□□□□□ -0.58
KPNA1-208ENST00000485027 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
KPNA1-208ENST00000485027 PPP6R1Q9UPN7 881 aa11.33□□□□□ -0.6
KPNA1-208ENST00000485027 NPM3O75607 178 aaKnown RBP11.31□□□□□ -0.6
KPNA1-208ENST00000485027 HAP1P54257 671 aaPredicted RBP11.3□□□□□ -0.6
KPNA1-208ENST00000485027 FKBP8Q14318 412 aa11.25□□□□□ -0.61
KPNA1-208ENST00000485027 PPP4R3CPQ6ZMV5 832 aa11.24□□□□□ -0.61
KPNA1-208ENST00000485027 HOMEZQ8IX15 550 aa11.19□□□□□ -0.62
KPNA1-208ENST00000485027 NISCHQ9Y2I1 1504 aa11.16□□□□□ -0.62
KPNA1-208ENST00000485027 GTF3C3Q9Y5Q9 886 aa11.12□□□□□ -0.63
KPNA1-208ENST00000485027 VSIG10Q8N0Z9 540 aa11.06□□□□□ -0.64
KPNA1-208ENST00000485027 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
KPNA1-208ENST00000485027 RANGAP1P46060 587 aaPredicted RBP11□□□□□ -0.65
KPNA1-208ENST00000485027 KDM2AQ9Y2K7 1162 aa10.98□□□□□ -0.65
KPNA1-208ENST00000485027 PODXL2Q9NZ53 605 aa10.91□□□□□ -0.66
KPNA1-208ENST00000485027 FBLN2P98095 1184 aa10.88□□□□□ -0.67
KPNA1-208ENST00000485027 TMEM132AQ24JP5 1023 aa10.88□□□□□ -0.67
KPNA1-208ENST00000485027 APLP2Q06481 763 aa10.87□□□□□ -0.67
KPNA1-208ENST00000485027 ERICH6Q7L0X2 663 aa10.86□□□□□ -0.67
KPNA1-208ENST00000485027 KLHL34Q8N239 644 aa10.83□□□□□ -0.68
KPNA1-208ENST00000485027 DCAF8L2P0C7V8 631 aa10.78□□□□□ -0.68
KPNA1-208ENST00000485027 C14orf37Q86TY3 774 aa10.77□□□□□ -0.68
KPNA1-208ENST00000485027 NPM2Q86SE8 214 aaKnown RBP10.62□□□□□ -0.71
KPNA1-208ENST00000485027 PELP1Q8IZL8 1130 aaKnown RBP10.62□□□□□ -0.71
KPNA1-208ENST00000485027 FOXD1Q16676 465 aa10.61□□□□□ -0.71
KPNA1-208ENST00000485027 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
KPNA1-208ENST00000485027 TTBK1Q5TCY1 1321 aaPredicted RBP10.57□□□□□ -0.72
KPNA1-208ENST00000485027 CNKSR2Q8WXI2 1034 aa10.56□□□□□ -0.72
KPNA1-208ENST00000485027 TRIM26Q12899 539 aaPredicted RBP10.54□□□□□ -0.72
KPNA1-208ENST00000485027 PAXIP1Q6ZW49 1069 aaPredicted RBP10.54□□□□□ -0.72
KPNA1-208ENST00000485027 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
KPNA1-208ENST00000485027 TSHZ2Q9NRE2 1034 aa10.49□□□□□ -0.73
KPNA1-208ENST00000485027 DNAJC5BQ9UF47 199 aa10.49□□□□□ -0.73
KPNA1-208ENST00000485027 PKD2Q13563 968 aa10.48□□□□□ -0.73
KPNA1-208ENST00000485027 UBTFP17480 764 aaKnown RBP10.47□□□□□ -0.73
KPNA1-208ENST00000485027 NBR1Q14596 966 aa10.47□□□□□ -0.73
KPNA1-208ENST00000485027 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.47□□□□□ -0.73
KPNA1-208ENST00000485027 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
KPNA1-208ENST00000485027 BBXQ8WY36 941 aaPredicted RBP10.45□□□□□ -0.74
KPNA1-208ENST00000485027 FBXO3Q9UK99 471 aa10.45□□□□□ -0.74
KPNA1-208ENST00000485027 ATXN8OSP0DMR3 200 aa10.43□□□□□ -0.74
KPNA1-208ENST00000485027 HRCP23327 699 aa10.43□□□□□ -0.74
KPNA1-208ENST00000485027 MYT1Q01538 1121 aa10.41□□□□□ -0.74
KPNA1-208ENST00000485027 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
KPNA1-208ENST00000485027 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
KPNA1-208ENST00000485027 DNAJC5Q9H3Z4 198 aa10.3□□□□□ -0.76
KPNA1-208ENST00000485027 VASPP50552 380 aaPredicted RBP10.27□□□□□ -0.77
KPNA1-208ENST00000485027 PIAS4Q8N2W9 510 aaPredicted RBP10.27□□□□□ -0.77
KPNA1-208ENST00000485027 SPRYD3Q8NCJ5 442 aa10.26□□□□□ -0.77
KPNA1-208ENST00000485027 MYCNP04198 464 aaPredicted RBP10.2□□□□□ -0.78
KPNA1-208ENST00000485027 LOC105371045A0A1W2PR82 267 aa10.19□□□□□ -0.78
KPNA1-208ENST00000485027 EIF5BO60841 1220 aaKnown RBP10.19□□□□□ -0.78
KPNA1-208ENST00000485027 POTEDQ86YR6 584 aa10.14□□□□□ -0.79
KPNA1-208ENST00000485027 TRHP20396 242 aaPredicted RBP10.12□□□□□ -0.79
KPNA1-208ENST00000485027 BRPF1P55201 1214 aaPredicted RBP10.1□□□□□ -0.79
KPNA1-208ENST00000485027 ATF5Q9Y2D1 282 aaPredicted RBP10.09□□□□□ -0.79
KPNA1-208ENST00000485027 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
KPNA1-208ENST00000485027 SCAF1Q9H7N4 1312 aaKnown RBP10.05□□□□□ -0.8
KPNA1-208ENST00000485027 RGL2O15211 777 aa10.05□□□□□ -0.8
KPNA1-208ENST00000485027 RNF216Q9NWF9 866 aaPredicted RBP10.03□□□□□ -0.8
KPNA1-208ENST00000485027 CCDC180Q9P1Z9 1646 aa10.03□□□□□ -0.8
KPNA1-208ENST00000485027 ARID3AQ99856 593 aa9.99□□□□□ -0.81
KPNA1-208ENST00000485027 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
KPNA1-208ENST00000485027 PROM2Q8N271 834 aa9.98□□□□□ -0.81
KPNA1-208ENST00000485027 MAPK8IP2Q13387 824 aaPredicted RBP9.96□□□□□ -0.81
KPNA1-208ENST00000485027 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
KPNA1-208ENST00000485027 CHGAP10645 457 aaKnown RBP9.93□□□□□ -0.82
KPNA1-208ENST00000485027 IGSF3O75054 1194 aa9.92□□□□□ -0.82
KPNA1-208ENST00000485027 C1orf115Q9H7X2 142 aa9.92□□□□□ -0.82
KPNA1-208ENST00000485027 NECTIN2Q92692 538 aa9.91□□□□□ -0.82
KPNA1-208ENST00000485027 ZMYND15Q9H091 742 aa9.9□□□□□ -0.82
KPNA1-208ENST00000485027 NEUROD2Q15784 382 aa9.88□□□□□ -0.83
KPNA1-208ENST00000485027 RSPH6AQ9H0K4 717 aa9.87□□□□□ -0.83
KPNA1-208ENST00000485027 ZBTB7CA1YPR0 619 aa9.86□□□□□ -0.83
KPNA1-208ENST00000485027 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
KPNA1-208ENST00000485027 LMOD2Q6P5Q4 547 aa9.84□□□□□ -0.83
KPNA1-208ENST00000485027 SHROOM4Q9ULL8 1493 aa9.83□□□□□ -0.84
KPNA1-208ENST00000485027 SPOCK2Q92563 424 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms