RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 CYP11A1P05108 521 aa9.07□□□□□ -0.96
CCDC66-219ENST00000484441 NXPE4Q6UWF7 544 aa9.07□□□□□ -0.96
CCDC66-219ENST00000484441 SMG8Q8ND04 991 aaKnown RBP9.07□□□□□ -0.96
CCDC66-219ENST00000484441 ANKRD33BA6NCL7 494 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 GIPC1O14908 333 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 CTSBP07858 339 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 PREPP48147 710 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 FCGRTP55899 365 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 ATP2B2Q01814 1243 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 DTHD1Q6ZMT9 781 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.06□□□□□ -0.96
CCDC66-219ENST00000484441 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 ANKRD24Q8TF21 1146 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 MYRFLQ96LU7 910 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 OSBPL7Q9BZF2 842 aa9.06□□□□□ -0.96
CCDC66-219ENST00000484441 AP3B2Q13367 1082 aa9.05□□□□□ -0.96
CCDC66-219ENST00000484441 PRSS36Q5K4E3 855 aa9.05□□□□□ -0.96
CCDC66-219ENST00000484441 EXOSC6Q5RKV6 272 aaKnown RBP9.05□□□□□ -0.96
CCDC66-219ENST00000484441 DDX54Q8TDD1 881 aaKnown RBP9.05□□□□□ -0.96
CCDC66-219ENST00000484441 PPP4R2Q9NY27 417 aa9.05□□□□□ -0.96
CCDC66-219ENST00000484441 LDHBP07195 334 aaKnown RBP9.04□□□□□ -0.96
CCDC66-219ENST00000484441 MAOBP27338 520 aa9.04□□□□□ -0.96
CCDC66-219ENST00000484441 POU4F3Q15319 338 aa9.04□□□□□ -0.96
CCDC66-219ENST00000484441 HIF3AQ9Y2N7 669 aa9.04□□□□□ -0.96
CCDC66-219ENST00000484441 DHX15O43143 795 aaKnown RBP9.03□□□□□ -0.96
CCDC66-219ENST00000484441 PRPF40AO75400 957 aaKnown RBP9.03□□□□□ -0.96
CCDC66-219ENST00000484441 GSTT1P30711 240 aa9.03□□□□□ -0.96
CCDC66-219ENST00000484441 HP1BP3Q5SSJ5 553 aaPredicted RBP9.03□□□□□ -0.96
CCDC66-219ENST00000484441 NUTM2GQ5VZR2 741 aa9.03□□□□□ -0.96
CCDC66-219ENST00000484441 FDX2Q6P4F2 183 aa9.03□□□□□ -0.96
CCDC66-219ENST00000484441 UTP4Q969X6 686 aaKnown RBP9.03□□□□□ -0.96
CCDC66-219ENST00000484441 FRMD6Q96NE9 622 aa9.03□□□□□ -0.96
CCDC66-219ENST00000484441 C12orf49Q9H741 205 aa9.03□□□□□ -0.96
CCDC66-219ENST00000484441 CYP4F12Q9HCS2 524 aa9.03□□□□□ -0.96
CCDC66-219ENST00000484441 PPM1HQ9ULR3 514 aa9.03□□□□□ -0.96
CCDC66-219ENST00000484441 RAXQ9Y2V3 346 aa9.03□□□□□ -0.96
CCDC66-219ENST00000484441 ECEL1O95672 775 aa9.02□□□□□ -0.97
CCDC66-219ENST00000484441 FAM20CQ8IXL6 584 aa9.02□□□□□ -0.97
CCDC66-219ENST00000484441 SPG7Q9UQ90 795 aa9.02□□□□□ -0.97
CCDC66-219ENST00000484441 SYNGAP1Q96PV0 1343 aa9.02□□□□□ -0.97
CCDC66-219ENST00000484441 FGD1P98174 961 aa9.01□□□□□ -0.97
CCDC66-219ENST00000484441 SLC51AQ86UW1 340 aa9.01□□□□□ -0.97
CCDC66-219ENST00000484441 CORO1BQ9BR76 489 aa9.01□□□□□ -0.97
CCDC66-219ENST00000484441 GZF1Q9H116 711 aaPredicted RBP9.01□□□□□ -0.97
CCDC66-219ENST00000484441 TMEM39AQ9NV64 488 aa9.01□□□□□ -0.97
CCDC66-219ENST00000484441 GNA15P30679 374 aa9□□□□□ -0.97
CCDC66-219ENST00000484441 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
CCDC66-219ENST00000484441 PDZD3Q86UT5 571 aa9□□□□□ -0.97
CCDC66-219ENST00000484441 FAM8A1Q9UBU6 413 aa9□□□□□ -0.97
CCDC66-219ENST00000484441 LOC100996750A0A140TA64 210 aa8.99□□□□□ -0.97
CCDC66-219ENST00000484441 SART1O43290 800 aaKnown RBP8.99□□□□□ -0.97
CCDC66-219ENST00000484441 ADH5P11766 374 aa8.99□□□□□ -0.97
CCDC66-219ENST00000484441 ERCC3P19447 782 aa8.99□□□□□ -0.97
CCDC66-219ENST00000484441 ZNF157P51786 506 aaPredicted RBP8.99□□□□□ -0.97
CCDC66-219ENST00000484441 PPP2R3AQ06190 1150 aa8.99□□□□□ -0.97
CCDC66-219ENST00000484441 SOX4Q06945 474 aaPredicted RBP8.99□□□□□ -0.97
CCDC66-219ENST00000484441 CCDC27Q2M243 656 aa8.99□□□□□ -0.97
CCDC66-219ENST00000484441 FBXO33Q7Z6M2 555 aa8.99□□□□□ -0.97
CCDC66-219ENST00000484441 C2CD4AQ8NCU7 369 aaPredicted RBP8.99□□□□□ -0.97
CCDC66-219ENST00000484441 NECAB3Q96P71 396 aaPredicted RBP8.99□□□□□ -0.97
CCDC66-219ENST00000484441 KRTAP4-6Q9BYQ5 205 aa8.99□□□□□ -0.97
CCDC66-219ENST00000484441 GPN3Q9UHW5 284 aaPredicted RBP8.99□□□□□ -0.97
CCDC66-219ENST00000484441 BMP3P12645 472 aa8.98□□□□□ -0.97
CCDC66-219ENST00000484441 FSTP19883 344 aa8.98□□□□□ -0.97
CCDC66-219ENST00000484441 C12orf50Q8NA57 414 aaPredicted RBP8.98□□□□□ -0.97
CCDC66-219ENST00000484441 GSX1Q9H4S2 264 aaPredicted RBP8.98□□□□□ -0.97
CCDC66-219ENST00000484441 C7orf69Q9H7B7 122 aa8.98□□□□□ -0.97
CCDC66-219ENST00000484441 KRT82Q9NSB4 513 aa8.98□□□□□ -0.97
CCDC66-219ENST00000484441 AKAP2Q9Y2D5 859 aa8.98□□□□□ -0.97
CCDC66-219ENST00000484441 ENC1O14682 589 aa8.97□□□□□ -0.97
CCDC66-219ENST00000484441 GSTP1P09211 210 aaKnown RBP8.97□□□□□ -0.97
CCDC66-219ENST00000484441 CLEC10AQ8IUN9 316 aa8.97□□□□□ -0.97
CCDC66-219ENST00000484441 FAM83CQ9BQN1 747 aa8.97□□□□□ -0.97
CCDC66-219ENST00000484441 WDR18Q9BV38 432 aa8.97□□□□□ -0.97
CCDC66-219ENST00000484441 STOML1Q9UBI4 398 aa8.97□□□□□ -0.97
CCDC66-219ENST00000484441 GSC2O15499 205 aa8.96□□□□□ -0.98
CCDC66-219ENST00000484441 GAS2O43903 313 aaKnown RBP8.96□□□□□ -0.98
CCDC66-219ENST00000484441 USP17L7P0C7H9 530 aa8.96□□□□□ -0.98
CCDC66-219ENST00000484441 DRD2P14416 443 aa8.96□□□□□ -0.98
CCDC66-219ENST00000484441 SULF2Q8IWU5 870 aa8.96□□□□□ -0.98
CCDC66-219ENST00000484441 STK35Q8TDR2 534 aa8.96□□□□□ -0.98
CCDC66-219ENST00000484441 DUSP9Q99956 384 aaKnown RBP8.96□□□□□ -0.98
CCDC66-219ENST00000484441 CCDC86Q9H6F5 360 aaKnown RBP8.96□□□□□ -0.98
CCDC66-219ENST00000484441 CACNA2D2Q9NY47 1150 aa8.96□□□□□ -0.98
CCDC66-219ENST00000484441 AOC2O75106 756 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 NME2P22392 152 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 ZNF252P-AS1Q0IIN9 211 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 KIF4BQ2VIQ3 1234 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 SGO2Q562F6 1265 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 BEND4Q6ZU67 534 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 TRIM42Q8IWZ5 723 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 HOMEZQ8IX15 550 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 EZH1Q92800 747 aaPredicted RBP8.95□□□□□ -0.98
CCDC66-219ENST00000484441 CEP44Q9C0F1 390 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 RNF19AQ9NV58 838 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 PCDHGC5Q9Y5F6 944 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 AK5Q9Y6K8 562 aa8.95□□□□□ -0.98
CCDC66-219ENST00000484441 HMX2A2RU54 273 aa8.94□□□□□ -0.98
CCDC66-219ENST00000484441 ZNF862O60290 1169 aa8.94□□□□□ -0.98
CCDC66-219ENST00000484441 IGLV1-40P01703 118 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms