RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 MAOBP27338 520 aa8.94□□□□□ -0.98
SCAF11-207ENST00000484275 RXRBP28702 533 aa8.94□□□□□ -0.98
SCAF11-207ENST00000484275 GP2P55259 537 aaKnown RBP8.94□□□□□ -0.98
SCAF11-207ENST00000484275 KIAA0319Q5VV43 1072 aa8.94□□□□□ -0.98
SCAF11-207ENST00000484275 FBLIM1Q8WUP2 373 aa8.94□□□□□ -0.98
SCAF11-207ENST00000484275 TRIM56Q9BRZ2 755 aaKnown RBP8.94□□□□□ -0.98
SCAF11-207ENST00000484275 GRIK1P39086 918 aa8.93□□□□□ -0.98
SCAF11-207ENST00000484275 SOX4Q06945 474 aaPredicted RBP8.93□□□□□ -0.98
SCAF11-207ENST00000484275 FBXL6Q8N531 539 aa8.93□□□□□ -0.98
SCAF11-207ENST00000484275 ARID3AQ99856 593 aa8.93□□□□□ -0.98
SCAF11-207ENST00000484275 NPHS2Q9NP85 383 aa8.93□□□□□ -0.98
SCAF11-207ENST00000484275 GPR182O15218 404 aa8.92□□□□□ -0.98
SCAF11-207ENST00000484275 NDUFB5O43674 189 aa8.92□□□□□ -0.98
SCAF11-207ENST00000484275 RETREG2Q8NC44 543 aa8.92□□□□□ -0.98
SCAF11-207ENST00000484275 COL17A1Q9UMD9 1497 aaPredicted RBP8.91□□□□□ -0.98
SCAF11-207ENST00000484275 FAM95CA0A1B0GW59 222 aa8.91□□□□□ -0.98
SCAF11-207ENST00000484275 B3GALT4O96024 378 aa8.91□□□□□ -0.98
SCAF11-207ENST00000484275 ADH5P11766 374 aa8.91□□□□□ -0.98
SCAF11-207ENST00000484275 ADMP35318 185 aa8.91□□□□□ -0.98
SCAF11-207ENST00000484275 NFKBIBQ15653 356 aa8.91□□□□□ -0.98
SCAF11-207ENST00000484275 ZNF576Q9H609 170 aa8.91□□□□□ -0.98
SCAF11-207ENST00000484275 CPNE3O75131 537 aaKnown RBP8.9□□□□□ -0.98
SCAF11-207ENST00000484275 ITPKAP23677 461 aa8.9□□□□□ -0.98
SCAF11-207ENST00000484275 USP11P51784 963 aa8.9□□□□□ -0.98
SCAF11-207ENST00000484275 EZH1Q92800 747 aaPredicted RBP8.9□□□□□ -0.98
SCAF11-207ENST00000484275 EHD4Q9H223 541 aa8.9□□□□□ -0.98
SCAF11-207ENST00000484275 PIM2Q9P1W9 311 aa8.9□□□□□ -0.98
SCAF11-207ENST00000484275 ACTL7BQ9Y614 415 aa8.9□□□□□ -0.98
SCAF11-207ENST00000484275 EIF1AYO14602 144 aaKnown RBP8.89□□□□□ -0.99
SCAF11-207ENST00000484275 CYP11A1P05108 521 aa8.89□□□□□ -0.99
SCAF11-207ENST00000484275 PDE3BQ13370 1112 aa8.89□□□□□ -0.99
SCAF11-207ENST00000484275 POU4F3Q15319 338 aa8.89□□□□□ -0.99
SCAF11-207ENST00000484275 NIF3L1Q9GZT8 377 aa8.89□□□□□ -0.99
SCAF11-207ENST00000484275 ABCB6Q9NP58 842 aa8.89□□□□□ -0.99
SCAF11-207ENST00000484275 NEFLP07196 543 aa8.88□□□□□ -0.99
SCAF11-207ENST00000484275 GATA6Q92908 595 aa8.88□□□□□ -0.99
SCAF11-207ENST00000484275 CCDC74AQ96AQ1 378 aa8.88□□□□□ -0.99
SCAF11-207ENST00000484275 PRKAG2Q9UGJ0 569 aa8.88□□□□□ -0.99
SCAF11-207ENST00000484275 SUPT5HO00267 1087 aaKnown RBP8.87□□□□□ -0.99
SCAF11-207ENST00000484275 IRAK1P51617 712 aa8.87□□□□□ -0.99
SCAF11-207ENST00000484275 MSMPQ1L6U9 139 aa8.87□□□□□ -0.99
SCAF11-207ENST00000484275 PAOXQ6QHF9 649 aa8.87□□□□□ -0.99
SCAF11-207ENST00000484275 CITED4Q96RK1 184 aa8.87□□□□□ -0.99
SCAF11-207ENST00000484275 ATG3Q9NT62 314 aa8.87□□□□□ -0.99
SCAF11-207ENST00000484275 FAM105AQ9NUU6 356 aa8.87□□□□□ -0.99
SCAF11-207ENST00000484275 LEMD3Q9Y2U8 911 aa8.87□□□□□ -0.99
SCAF11-207ENST00000484275 EIF4EBP3O60516 100 aaPredicted RBP8.86□□□□□ -0.99
SCAF11-207ENST00000484275 WNT11O96014 354 aa8.86□□□□□ -0.99
SCAF11-207ENST00000484275 NFICP08651 508 aa8.86□□□□□ -0.99
SCAF11-207ENST00000484275 AKAP4Q5JQC9 854 aa8.86□□□□□ -0.99
SCAF11-207ENST00000484275 ZAR1Q86SH2 424 aa8.86□□□□□ -0.99
SCAF11-207ENST00000484275 KRTAP19-1Q8IUB9 90 aa8.86□□□□□ -0.99
SCAF11-207ENST00000484275 KRTAP1-3Q8IUG1 177 aa8.86□□□□□ -0.99
SCAF11-207ENST00000484275 GLIS3Q8NEA6 775 aa8.86□□□□□ -0.99
SCAF11-207ENST00000484275 OSBPL1AQ9BXW6 950 aa8.86□□□□□ -0.99
SCAF11-207ENST00000484275 FAM170BA6NMN3 283 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 FOSL1P15407 271 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 TAL1P17542 331 aaPredicted RBP8.85□□□□□ -0.99
SCAF11-207ENST00000484275 RAB6AP20340 208 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 FAAP100Q0VG06 881 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 PRPF40BQ6NWY9 871 aaKnown RBP8.85□□□□□ -0.99
SCAF11-207ENST00000484275 NFXL1Q6ZNB6 911 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 TBC1D32Q96NH3 1257 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 CORO1BQ9BR76 489 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 DNAJC25Q9H1X3 360 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 SEMA6CQ9H3T2 930 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 GSX1Q9H4S2 264 aaPredicted RBP8.85□□□□□ -0.99
SCAF11-207ENST00000484275 ACSS3Q9H6R3 686 aa8.85□□□□□ -0.99
SCAF11-207ENST00000484275 PTPN12Q05209 780 aaKnown RBP8.84□□□□□ -0.99
SCAF11-207ENST00000484275 GRM2Q14416 872 aa8.84□□□□□ -0.99
SCAF11-207ENST00000484275 DYMQ7RTS9 669 aa8.84□□□□□ -0.99
SCAF11-207ENST00000484275 GIMAP7Q8NHV1 300 aa8.84□□□□□ -0.99
SCAF11-207ENST00000484275 TMC1Q8TDI8 760 aa8.84□□□□□ -0.99
SCAF11-207ENST00000484275 EPS8L3Q8TE67 593 aaKnown RBP8.84□□□□□ -0.99
SCAF11-207ENST00000484275 RBCK1Q9BYM8 510 aa8.84□□□□□ -0.99
SCAF11-207ENST00000484275 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
SCAF11-207ENST00000484275 ZNF157P51786 506 aaPredicted RBP8.83□□□□□ -1
SCAF11-207ENST00000484275 WDR18Q9BV38 432 aa8.83□□□□□ -1
SCAF11-207ENST00000484275 RAD18Q9NS91 495 aa8.83□□□□□ -1
SCAF11-207ENST00000484275 AP4E1Q9UPM8 1137 aa8.83□□□□□ -1
SCAF11-207ENST00000484275 DYNC1LI2O43237 492 aaPredicted RBP8.82□□□□□ -1
SCAF11-207ENST00000484275 AOC2O75106 756 aa8.82□□□□□ -1
SCAF11-207ENST00000484275 GADD45BO75293 160 aaPredicted RBP8.82□□□□□ -1
SCAF11-207ENST00000484275 CPSF6Q16630 551 aaKnown RBP eCLIP8.82□□□□□ -1
SCAF11-207ENST00000484275 LCE3BQ5TA77 95 aa8.82□□□□□ -1
SCAF11-207ENST00000484275 PI16Q6UXB8 463 aa8.82□□□□□ -1
SCAF11-207ENST00000484275 SEZ6L2Q6UXD5 910 aa8.82□□□□□ -1
SCAF11-207ENST00000484275 ALKBH8Q96BT7 664 aaKnown RBP8.82□□□□□ -1
SCAF11-207ENST00000484275 WDR89Q96FK6 387 aaPredicted RBP8.82□□□□□ -1
SCAF11-207ENST00000484275 CSRNP1Q96S65 589 aa8.82□□□□□ -1
SCAF11-207ENST00000484275 YIPF2Q9BWQ6 316 aa8.82□□□□□ -1
SCAF11-207ENST00000484275 PPP1R9AQ9ULJ8 1098 aa8.82□□□□□ -1
SCAF11-207ENST00000484275 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.81□□□□□ -1
SCAF11-207ENST00000484275 SOWAHDA6NJG2 315 aa8.81□□□□□ -1
SCAF11-207ENST00000484275 HP1BP3Q5SSJ5 553 aaPredicted RBP8.81□□□□□ -1
SCAF11-207ENST00000484275 METTL22Q9BUU2 404 aaPredicted RBP8.81□□□□□ -1
SCAF11-207ENST00000484275 C1GALT1Q9NS00 363 aa8.81□□□□□ -1
SCAF11-207ENST00000484275 ADGRE2Q9UHX3 823 aa8.81□□□□□ -1
SCAF11-207ENST00000484275 ASPAP45381 313 aa8.8□□□□□ -1
SCAF11-207ENST00000484275 PDE3AQ14432 1141 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms