RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 LMBRD1Q9NUN5 540 aa11.39□□□□□ -0.59
UFD1-208ENST00000484101 FSD2A1L4K1 749 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 E7EWF7 191 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 PFKFB2O60825 505 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 IDH1O75874 414 aaKnown RBP11.38□□□□□ -0.59
UFD1-208ENST00000484101 PHF14O94880 888 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 F13A1P00488 732 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 SYT1P21579 422 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 NT5C2P49902 561 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 MRE11P49959 708 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 EVCP57679 992 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 EXOSC10Q01780 885 aaKnown RBP11.38□□□□□ -0.59
UFD1-208ENST00000484101 FSTL1Q12841 308 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 TRDNQ13061 729 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 RASGRF1Q13972 1273 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 Q6ZUG5 572 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 RALYLQ86SE5 291 aaKnown RBP11.38□□□□□ -0.59
UFD1-208ENST00000484101 NCOA7Q8NI08 942 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 ZNF274Q96GC6 653 aaPredicted RBP11.38□□□□□ -0.59
UFD1-208ENST00000484101 MTA3Q9BTC8 594 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 DENND2AQ9ULE3 1009 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 CD2APQ9Y5K6 639 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 TNRC6CQ9HCJ0 1690 aaKnown RBP11.38□□□□□ -0.59
UFD1-208ENST00000484101 MYH15Q9Y2K3 1946 aa11.38□□□□□ -0.59
UFD1-208ENST00000484101 ZNF532Q9HCE3 1301 aa11.37□□□□□ -0.59
UFD1-208ENST00000484101 TCRBV5S4A2TA0A5A2 114 aa11.37□□□□□ -0.59
UFD1-208ENST00000484101 ZNF213O14771 459 aa11.37□□□□□ -0.59
UFD1-208ENST00000484101 DHX16O60231 1041 aaKnown RBP11.37□□□□□ -0.59
UFD1-208ENST00000484101 CPA1P15085 419 aa11.37□□□□□ -0.59
UFD1-208ENST00000484101 MCM5P33992 734 aa11.37□□□□□ -0.59
UFD1-208ENST00000484101 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
UFD1-208ENST00000484101 NACAP1Q9BZK3 213 aa11.37□□□□□ -0.59
UFD1-208ENST00000484101 CNNM2Q9H8M5 875 aa11.37□□□□□ -0.59
UFD1-208ENST00000484101 PIH1D3Q9NQM4 214 aaKnown RBP11.37□□□□□ -0.59
UFD1-208ENST00000484101 LRRC37AA6NMS7 1700 aa11.36□□□□□ -0.59
UFD1-208ENST00000484101 LARGE1O95461 756 aa11.36□□□□□ -0.59
UFD1-208ENST00000484101 ZNF445P59923 1031 aa11.36□□□□□ -0.59
UFD1-208ENST00000484101 RPS8P62241 208 aaKnown RBP11.36□□□□□ -0.59
UFD1-208ENST00000484101 LARP1BQ659C4 914 aaKnown RBP11.36□□□□□ -0.59
UFD1-208ENST00000484101 STOX1Q6ZVD7 989 aa11.36□□□□□ -0.59
UFD1-208ENST00000484101 VPS37DQ86XT2 251 aa11.36□□□□□ -0.59
UFD1-208ENST00000484101 CNBD1Q8NA66 436 aa11.36□□□□□ -0.59
UFD1-208ENST00000484101 PUS7LQ9H0K6 701 aaKnown RBP11.36□□□□□ -0.59
UFD1-208ENST00000484101 TFCP2L1Q9NZI6 479 aa11.36□□□□□ -0.59
UFD1-208ENST00000484101 TCHHQ07283 1943 aa11.35□□□□□ -0.59
UFD1-208ENST00000484101 PATL2C9JE40 543 aaKnown RBP11.35□□□□□ -0.59
UFD1-208ENST00000484101 NPHP1O15259 732 aa11.35□□□□□ -0.59
UFD1-208ENST00000484101 FGAP02671 866 aa11.35□□□□□ -0.59
UFD1-208ENST00000484101 PCP11498 1178 aaKnown RBP11.35□□□□□ -0.59
UFD1-208ENST00000484101 ST5P78524 1137 aa11.35□□□□□ -0.59
UFD1-208ENST00000484101 TMC4Q7Z404 712 aa11.35□□□□□ -0.59
UFD1-208ENST00000484101 BRF1Q92994 677 aa11.35□□□□□ -0.59
UFD1-208ENST00000484101 STRBPQ96SI9 672 aaKnown RBP11.35□□□□□ -0.59
UFD1-208ENST00000484101 MINPP1Q9UNW1 487 aa11.35□□□□□ -0.59
UFD1-208ENST00000484101 LAMB1P07942 1786 aa11.35□□□□□ -0.59
UFD1-208ENST00000484101 CACNA1SQ13698 1873 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 PRPF40AO75400 957 aaKnown RBP11.34□□□□□ -0.59
UFD1-208ENST00000484101 LETM1O95202 739 aaPredicted RBP11.34□□□□□ -0.59
UFD1-208ENST00000484101 KRT85P78386 507 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 ST3GAL1Q11201 340 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 ATL3Q6DD88 541 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 NAA16Q6N069 864 aaPredicted RBP11.34□□□□□ -0.59
UFD1-208ENST00000484101 PI16Q6UXB8 463 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 BICDL1Q6ZP65 573 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 CERS3Q8IU89 383 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 MB21D2Q8IYB1 491 aaPredicted RBP11.34□□□□□ -0.59
UFD1-208ENST00000484101 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 FAM184AQ8NB25 1140 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 HELBQ8NG08 1087 aaPredicted RBP11.34□□□□□ -0.59
UFD1-208ENST00000484101 SMARCC2Q8TAQ2 1214 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 TMEM87BQ96K49 555 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 KRT23Q9C075 422 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 NAPBQ9H115 298 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 RNF41Q9H4P4 317 aaPredicted RBP11.34□□□□□ -0.59
UFD1-208ENST00000484101 ZSCAN16Q9H4T2 348 aaPredicted RBP11.34□□□□□ -0.59
UFD1-208ENST00000484101 LRP2BPQ9P2M1 347 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
UFD1-208ENST00000484101 MTMR6Q9Y217 621 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 LEMD3Q9Y2U8 911 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 NRXN2Q9P2S2 1712 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 TAF1P21675 1872 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 ELP1O95163 1332 aa11.34□□□□□ -0.59
UFD1-208ENST00000484101 FOXP2O15409 715 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 CDKL5O76039 1030 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 CHGBP05060 677 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 RCAN1P53805 252 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 UBE2HP62256 183 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 GRAPQ13588 217 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 SPTY2D1Q68D10 685 aaPredicted RBP11.33□□□□□ -0.6
UFD1-208ENST00000484101 MSL1Q68DK7 614 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 GIMAP6Q6P9H5 292 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 C15orf52Q6ZUT6 534 aaKnown RBP11.33□□□□□ -0.6
UFD1-208ENST00000484101 FBXO33Q7Z6M2 555 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 FLAD1Q8NFF5 587 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 GRAPLQ8TC17 118 aaPredicted RBP11.33□□□□□ -0.6
UFD1-208ENST00000484101 SCAND2PQ9GZW5 306 aaPredicted RBP11.33□□□□□ -0.6
UFD1-208ENST00000484101 TAF6LQ9Y6J9 622 aa11.33□□□□□ -0.6
UFD1-208ENST00000484101 COL4A1P02462 1669 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms