RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 C1orf127Q8N9H9 656 aa5.89□□□□□ -1.47
LRCH3-217ENST00000483442 HHIPQ96QV1 700 aa5.89□□□□□ -1.47
LRCH3-217ENST00000483442 MUC3BQ9H195 1237 aa5.89□□□□□ -1.47
LRCH3-217ENST00000483442 FAM13BQ9NYF5 915 aa5.89□□□□□ -1.47
LRCH3-217ENST00000483442 CDK11AQ9UQ88 783 aaPredicted RBP5.89□□□□□ -1.47
LRCH3-217ENST00000483442 RAXQ9Y2V3 346 aa5.89□□□□□ -1.47
LRCH3-217ENST00000483442 C3P01024 1663 aa5.88□□□□□ -1.47
LRCH3-217ENST00000483442 ADAMTS4O75173 837 aa5.88□□□□□ -1.47
LRCH3-217ENST00000483442 TGFB1P01137 390 aa5.88□□□□□ -1.47
LRCH3-217ENST00000483442 CD97P48960 835 aa5.88□□□□□ -1.47
LRCH3-217ENST00000483442 PBXIP1Q96AQ6 731 aa5.88□□□□□ -1.47
LRCH3-217ENST00000483442 SPACA7Q96KW9 195 aa5.88□□□□□ -1.47
LRCH3-217ENST00000483442 ADAM19Q9H013 955 aa5.88□□□□□ -1.47
LRCH3-217ENST00000483442 SALL4Q9UJQ4 1053 aa5.88□□□□□ -1.47
LRCH3-217ENST00000483442 FNDC3AQ9Y2H6 1198 aaKnown RBP5.88□□□□□ -1.47
LRCH3-217ENST00000483442 IGLV1-40P01703 118 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 NCAPG2Q86XI2 1143 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 ANKLE2Q86XL3 938 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 CACTIN-AS1Q8N1I8 211 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 ABTB2Q8N961 1025 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 EDEM1Q92611 657 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 FAM46AQ96IP4 442 aaKnown RBP5.87□□□□□ -1.47
LRCH3-217ENST00000483442 ZMYND15Q9H091 742 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 STOML1Q9UBI4 398 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 CNTLNQ9NXG0 1405 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 ZNF518AQ6AHZ1 1483 aa5.87□□□□□ -1.47
LRCH3-217ENST00000483442 NPATQ14207 1427 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 PTPRKQ15262 1439 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 HMX2A2RU54 273 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 MTMR3Q13615 1198 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 DUOXA2Q1HG44 320 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 PDE12Q6L8Q7 609 aaKnown RBP5.86□□□□□ -1.47
LRCH3-217ENST00000483442 ZNF438Q7Z4V0 828 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 ZDHHC13Q8IUH4 622 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 TRIM42Q8IWZ5 723 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 CHRDQ9H2X0 955 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 PCMTD2Q9NV79 361 aa5.86□□□□□ -1.47
LRCH3-217ENST00000483442 CDK13Q14004 1512 aaKnown RBP5.85□□□□□ -1.47
LRCH3-217ENST00000483442 SHANK2Q9UPX8 1470 aa5.85□□□□□ -1.47
LRCH3-217ENST00000483442 PDGFAP04085 211 aa5.85□□□□□ -1.47
LRCH3-217ENST00000483442 HNRNPMP52272 730 aaKnown RBP eCLIP5.85□□□□□ -1.47
LRCH3-217ENST00000483442 DNM1Q05193 864 aaKnown RBP5.85□□□□□ -1.47
LRCH3-217ENST00000483442 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
LRCH3-217ENST00000483442 XKR5Q6UX68 686 aa5.85□□□□□ -1.47
LRCH3-217ENST00000483442 C7orf69Q9H7B7 122 aa5.85□□□□□ -1.47
LRCH3-217ENST00000483442 DZANK1Q9NVP4 752 aa5.85□□□□□ -1.47
LRCH3-217ENST00000483442 ARHGAP5Q13017 1502 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 PLA2R1Q13018 1463 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 TCOF1Q13428 1488 aaKnown RBP5.84□□□□□ -1.47
LRCH3-217ENST00000483442 MLH3Q9UHC1 1453 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 PRR19A6NJB7 356 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 DHX15O43143 795 aaKnown RBP5.84□□□□□ -1.47
LRCH3-217ENST00000483442 PTPRAP18433 802 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 MPSTP25325 297 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 SLC51AQ86UW1 340 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 THEMISQ8N1K5 641 aaPredicted RBP5.84□□□□□ -1.47
LRCH3-217ENST00000483442 KLHL23Q8NBE8 558 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 HELQQ8TDG4 1101 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 UTP4Q969X6 686 aaKnown RBP5.84□□□□□ -1.47
LRCH3-217ENST00000483442 SEC31BQ9NQW1 1179 aa5.84□□□□□ -1.47
LRCH3-217ENST00000483442 SAMD9Q5K651 1589 aa5.84□□□□□ -1.48
LRCH3-217ENST00000483442 DIP2CQ9Y2E4 1556 aa5.84□□□□□ -1.48
LRCH3-217ENST00000483442 AGLP35573 1532 aa5.84□□□□□ -1.48
LRCH3-217ENST00000483442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.83□□□□□ -1.48
LRCH3-217ENST00000483442 SPAG9O60271 1321 aaKnown RBP5.83□□□□□ -1.48
LRCH3-217ENST00000483442 CARNS1A5YM72 827 aa5.83□□□□□ -1.48
LRCH3-217ENST00000483442 H3BRJ5 948 aa5.83□□□□□ -1.48
LRCH3-217ENST00000483442 CES1P23141 567 aa5.83□□□□□ -1.48
LRCH3-217ENST00000483442 EIF1AXP47813 144 aaKnown RBP5.83□□□□□ -1.48
LRCH3-217ENST00000483442 PREPP48147 710 aa5.83□□□□□ -1.48
LRCH3-217ENST00000483442 NLRP12P59046 1061 aa5.83□□□□□ -1.48
LRCH3-217ENST00000483442 NFIAQ12857 509 aa5.83□□□□□ -1.48
LRCH3-217ENST00000483442 DCAF11Q8TEB1 546 aa5.83□□□□□ -1.48
LRCH3-217ENST00000483442 GTF3C2Q8WUA4 911 aaPredicted RBP5.83□□□□□ -1.48
LRCH3-217ENST00000483442 MYRFLQ96LU7 910 aa5.83□□□□□ -1.48
LRCH3-217ENST00000483442 SOX13Q9UN79 622 aa5.83□□□□□ -1.48
LRCH3-217ENST00000483442 TMEM88BA6NKF7 163 aa5.82□□□□□ -1.48
LRCH3-217ENST00000483442 KIAA1324LA8MWY0 1029 aaPredicted RBP5.82□□□□□ -1.48
LRCH3-217ENST00000483442 PDE2AO00408 941 aaPredicted RBP5.82□□□□□ -1.48
LRCH3-217ENST00000483442 EREGO14944 169 aa5.82□□□□□ -1.48
LRCH3-217ENST00000483442 C8orf34Q49A92 452 aa5.82□□□□□ -1.48
LRCH3-217ENST00000483442 NOM1Q5C9Z4 860 aaKnown RBP5.82□□□□□ -1.48
LRCH3-217ENST00000483442 MCTP1Q6DN14 999 aa5.82□□□□□ -1.48
LRCH3-217ENST00000483442 FAM117BQ6P1L5 589 aa5.82□□□□□ -1.48
LRCH3-217ENST00000483442 SLC7A3Q8WY07 619 aa5.82□□□□□ -1.48
LRCH3-217ENST00000483442 CEP41Q9BYV8 373 aa5.82□□□□□ -1.48
LRCH3-217ENST00000483442 POLIQ9UNA4 740 aa5.82□□□□□ -1.48
LRCH3-217ENST00000483442 OAS3Q9Y6K5 1087 aaKnown RBP5.82□□□□□ -1.48
LRCH3-217ENST00000483442 CPS1P31327 1500 aa5.82□□□□□ -1.48
LRCH3-217ENST00000483442 KDM5CP41229 1560 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 SOX1O00570 391 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-217ENST00000483442 DLGAP3O95886 979 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 BMP3P12645 472 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 UVSSAQ2YD98 709 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 RNF43Q68DV7 783 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 VN1R5Q7Z5H4 357 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 FAM20CQ8IXL6 584 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 SHISA5Q8N114 240 aa5.81□□□□□ -1.48
LRCH3-217ENST00000483442 NXPE3Q969Y0 559 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms