RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 YIPF2Q9BWQ6 316 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 VCPKMTQ9H867 229 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 PUF60Q9UHX1 559 aaKnown RBP8.93□□□□□ -0.98
COL4A5-205ENST00000483338 MYO6Q9UM54 1294 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 EIF3HO15372 352 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL4A5-205ENST00000483338 NRDCO43847 1150 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 CUTAO60888 179 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 KIAA0754O94854 1291 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 AK2P54819 239 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 CAPRIN2Q6IMN6 1127 aaKnown RBP8.93□□□□□ -0.98
COL4A5-205ENST00000483338 MIS18BP1Q6P0N0 1132 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.93□□□□□ -0.98
COL4A5-205ENST00000483338 TCP11Q8WWU5 503 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 PGBD1Q96JS3 809 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 TTC14Q96N46 770 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 FRMPD1Q5SYB0 1578 aa8.93□□□□□ -0.98
COL4A5-205ENST00000483338 ZC3H4Q9UPT8 1303 aaKnown RBP8.92□□□□□ -0.98
COL4A5-205ENST00000483338 POTEB2H3BUK9 544 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 HSPA2P54652 639 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 FILIP1LQ4L180 1135 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 CFAP70Q5T0N1 1121 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 CCDC13Q8IYE1 715 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 MAGEC3Q8TD91 643 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 CFAP53Q96M91 514 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 STK31Q9BXU1 1019 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 TSPYL2Q9H2G4 693 aaPredicted RBP8.92□□□□□ -0.98
COL4A5-205ENST00000483338 BATF3Q9NR55 127 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 IFNKQ9P0W0 207 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 TFIP11Q9UBB9 837 aaKnown RBP8.92□□□□□ -0.98
COL4A5-205ENST00000483338 TRIM35Q9UPQ4 493 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 PCDHGC5Q9Y5F6 944 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 FMNL1O95466 1100 aaPredicted RBP8.92□□□□□ -0.98
COL4A5-205ENST00000483338 ACCSLQ4AC99 568 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 TMEM132EQ6IEE7 984 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 SPATA32Q96LK8 384 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 PHF8Q9UPP1 1060 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 PPP2R2CQ9Y2T4 447 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 FAM135BQ49AJ0 1406 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 IQGAP1P46940 1657 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 FESP07332 822 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 RHOXF2BP0C7M4 288 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 TPP2P29144 1249 aaPredicted RBP8.92□□□□□ -0.98
COL4A5-205ENST00000483338 ZBED6P86452 979 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 ACRBPQ8NEB7 543 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 SCLT1Q96NL6 688 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 RHOXF2Q9BQY4 288 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 YIPF3Q9GZM5 350 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 LIMCH1Q9UPQ0 1083 aa8.92□□□□□ -0.98
COL4A5-205ENST00000483338 ARHGEF40Q8TER5 1519 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 TPD52L2O43399 206 aaKnown RBP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 FCHSD2O94868 740 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 ALDH1B1P30837 517 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 MFSD4BQ5TF39 518 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 BZW1Q7L1Q6 419 aaKnown RBP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 CCDC83Q8IWF9 413 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 LEO1Q8WVC0 666 aaPredicted RBP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 RSRC1Q96IZ7 334 aaKnown RBP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 TPX2Q9ULW0 747 aaKnown RBP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 MYL1P05976 194 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 ARHGAP25P42331 645 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 CWF19L1Q69YN2 538 aaKnown RBP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 CDC37L1Q7L3B6 337 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 FAM76AQ8TAV0 307 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 CAPS2Q9BXY5 557 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 VIPAS39Q9H9C1 493 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 RGL1Q9NZL6 768 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 PTCH1Q13635 1447 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 ZSCAN12O43309 604 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 AHCYL1O43865 530 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 SMNDC1O75940 238 aaKnown RBP eCLIP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 SSBP05455 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 CDR1P51861 262 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 PRPF40BQ6NWY9 871 aaKnown RBP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 CYB5D1Q6P9G0 228 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 SLC30A9Q6PML9 568 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 B4GALNT4Q76KP1 1039 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 PROCA1Q8NCQ7 364 aaPredicted RBP8.91□□□□□ -0.98
COL4A5-205ENST00000483338 NUP133Q8WUM0 1156 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 TUBGCP6Q96RT7 1819 aa8.91□□□□□ -0.98
COL4A5-205ENST00000483338 ABCC4O15439 1325 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 RBM47A0AV96 593 aaKnown RBP8.9□□□□□ -0.98
COL4A5-205ENST00000483338 MAGEA10P43363 369 aaPredicted RBP8.9□□□□□ -0.98
COL4A5-205ENST00000483338 GNGT1P63211 74 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 GOLGA8FQ08AF8 430 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 GOLGA8DPQ0D2H9 430 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 CCDC178Q5BJE1 867 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 FAM81AQ8TBF8 368 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 SCAND2PQ9GZW5 306 aaPredicted RBP8.9□□□□□ -0.98
COL4A5-205ENST00000483338 HPCAL4Q9UM19 191 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 ADCY9O60503 1353 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 PPFIA1Q13136 1202 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 PLCB4Q15147 1175 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 ME3Q16798 604 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 KIF4BQ2VIQ3 1234 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 TSHZ3Q63HK5 1081 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 ANKLE2Q86XL3 938 aa8.9□□□□□ -0.98
COL4A5-205ENST00000483338 HOOK2Q96ED9 719 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms