RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 BMP3P12645 472 aa6.46□□□□□ -1.38
CBX3-207ENST00000481300 ENOX2Q16206 610 aaKnown RBP6.46□□□□□ -1.38
CBX3-207ENST00000481300 RNF43Q68DV7 783 aa6.46□□□□□ -1.38
CBX3-207ENST00000481300 ALG1LQ6GMV1 187 aa6.46□□□□□ -1.38
CBX3-207ENST00000481300 KRTAP9-6A0A140TA67 174 aa6.45□□□□□ -1.38
CBX3-207ENST00000481300 RBM47A0AV96 593 aaKnown RBP6.45□□□□□ -1.38
CBX3-207ENST00000481300 MEGF11A6BM72 1044 aa6.45□□□□□ -1.38
CBX3-207ENST00000481300 SART1O43290 800 aaKnown RBP6.45□□□□□ -1.38
CBX3-207ENST00000481300 DLGAP3O95886 979 aa6.45□□□□□ -1.38
CBX3-207ENST00000481300 POLR3DP05423 398 aaPredicted RBP6.45□□□□□ -1.38
CBX3-207ENST00000481300 ARL4DP49703 201 aa6.45□□□□□ -1.38
CBX3-207ENST00000481300 RBM25P49756 843 aaKnown RBP6.45□□□□□ -1.38
CBX3-207ENST00000481300 FBXO33Q7Z6M2 555 aa6.45□□□□□ -1.38
CBX3-207ENST00000481300 CLEC10AQ8IUN9 316 aa6.45□□□□□ -1.38
CBX3-207ENST00000481300 ASAP3Q8TDY4 903 aa6.45□□□□□ -1.38
CBX3-207ENST00000481300 FAM83CQ9BQN1 747 aa6.45□□□□□ -1.38
CBX3-207ENST00000481300 LOC100289279A0A1B0GTE1 492 aa6.44□□□□□ -1.38
CBX3-207ENST00000481300 PRR19A6NJB7 356 aa6.44□□□□□ -1.38
CBX3-207ENST00000481300 KIAA1324LA8MWY0 1029 aaPredicted RBP6.44□□□□□ -1.38
CBX3-207ENST00000481300 PRPF40AO75400 957 aaKnown RBP6.44□□□□□ -1.38
CBX3-207ENST00000481300 ESRRAP11474 423 aaPredicted RBP6.44□□□□□ -1.38
CBX3-207ENST00000481300 ZNF16P17020 682 aaPredicted RBP6.44□□□□□ -1.38
CBX3-207ENST00000481300 FDX2Q6P4F2 183 aa6.44□□□□□ -1.38
CBX3-207ENST00000481300 BEND4Q6ZU67 534 aa6.44□□□□□ -1.38
CBX3-207ENST00000481300 DBNDD2Q9BQY9 259 aa6.44□□□□□ -1.38
CBX3-207ENST00000481300 TMPRSS13Q9BYE2 586 aa6.44□□□□□ -1.38
CBX3-207ENST00000481300 SOX17Q9H6I2 414 aaPredicted RBP6.44□□□□□ -1.38
CBX3-207ENST00000481300 NLRP2Q9NX02 1062 aa6.44□□□□□ -1.38
CBX3-207ENST00000481300 COBLO75128 1261 aa6.43□□□□□ -1.38
CBX3-207ENST00000481300 TIAF1O95411 115 aa6.43□□□□□ -1.38
CBX3-207ENST00000481300 ITGAEP38570 1179 aa6.43□□□□□ -1.38
CBX3-207ENST00000481300 XPCQ01831 940 aaPredicted RBP6.43□□□□□ -1.38
CBX3-207ENST00000481300 NPM2Q86SE8 214 aaKnown RBP6.43□□□□□ -1.38
CBX3-207ENST00000481300 FBF1Q8TES7 1133 aa6.43□□□□□ -1.38
CBX3-207ENST00000481300 USP26Q9BXU7 913 aa6.43□□□□□ -1.38
CBX3-207ENST00000481300 NRSN2Q9GZP1 204 aa6.43□□□□□ -1.38
CBX3-207ENST00000481300 KCNF1Q9H3M0 494 aa6.43□□□□□ -1.38
CBX3-207ENST00000481300 WWC3Q9ULE0 1092 aa6.43□□□□□ -1.38
CBX3-207ENST00000481300 HIF3AQ9Y2N7 669 aa6.43□□□□□ -1.38
CBX3-207ENST00000481300 SGO2Q562F6 1265 aa6.42□□□□□ -1.38
CBX3-207ENST00000481300 USPL1Q5W0Q7 1092 aa6.42□□□□□ -1.38
CBX3-207ENST00000481300 GALNT12Q8IXK2 581 aa6.42□□□□□ -1.38
CBX3-207ENST00000481300 SMG8Q8ND04 991 aaKnown RBP6.42□□□□□ -1.38
CBX3-207ENST00000481300 SHKBP1Q8TBC3 707 aa6.42□□□□□ -1.38
CBX3-207ENST00000481300 CCDC74AQ96AQ1 378 aa6.42□□□□□ -1.38
CBX3-207ENST00000481300 TCF12Q99081 682 aa6.42□□□□□ -1.38
CBX3-207ENST00000481300 DUSP9Q99956 384 aaKnown RBP6.42□□□□□ -1.38
CBX3-207ENST00000481300 A0A1W2PP55 124 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 GAS2O43903 313 aaKnown RBP6.41□□□□□ -1.38
CBX3-207ENST00000481300 ADAMTS4O75173 837 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 SPINK2P20155 84 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 MAP4P27816 1152 aaKnown RBP6.41□□□□□ -1.38
CBX3-207ENST00000481300 GRIA4P48058 902 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 TAGLNQ01995 201 aaKnown RBP6.41□□□□□ -1.38
CBX3-207ENST00000481300 NUTM2GQ5VZR2 741 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 CCNJLQ8IV13 435 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 ZNF428Q96B54 188 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 SETDB2Q96T68 719 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 SUGCTQ9HAC7 445 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 MRS2Q9HD23 443 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 NPHS2Q9NP85 383 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 SPG7Q9UQ90 795 aa6.41□□□□□ -1.38
CBX3-207ENST00000481300 A0A096LPE4 126 aa6.4□□□□□ -1.38
CBX3-207ENST00000481300 A0A1W2PPZ6 126 aa6.4□□□□□ -1.38
CBX3-207ENST00000481300 GADD45BO75293 160 aaPredicted RBP6.4□□□□□ -1.38
CBX3-207ENST00000481300 DRD2P14416 443 aa6.4□□□□□ -1.38
CBX3-207ENST00000481300 GSTM4Q03013 218 aa6.4□□□□□ -1.38
CBX3-207ENST00000481300 PSMD2Q13200 908 aa6.4□□□□□ -1.38
CBX3-207ENST00000481300 ZNF423Q2M1K9 1284 aa6.4□□□□□ -1.38
CBX3-207ENST00000481300 SPRED3Q2MJR0 410 aa6.4□□□□□ -1.38
CBX3-207ENST00000481300 C12orf50Q8NA57 414 aaPredicted RBP6.4□□□□□ -1.38
CBX3-207ENST00000481300 PARP2Q9UGN5 583 aa6.4□□□□□ -1.38
CBX3-207ENST00000481300 GNA15P30679 374 aa6.39□□□□□ -1.39
CBX3-207ENST00000481300 PCDH1Q08174 1060 aa6.39□□□□□ -1.39
CBX3-207ENST00000481300 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.39□□□□□ -1.39
CBX3-207ENST00000481300 EXOSC6Q5RKV6 272 aaKnown RBP6.39□□□□□ -1.39
CBX3-207ENST00000481300 EPS8L3Q8TE67 593 aaKnown RBP6.39□□□□□ -1.39
CBX3-207ENST00000481300 MFSD14AQ96MC6 490 aa6.39□□□□□ -1.39
CBX3-207ENST00000481300 FRMD6Q96NE9 622 aa6.39□□□□□ -1.39
CBX3-207ENST00000481300 CLEC4MQ9H2X3 399 aaPredicted RBP6.39□□□□□ -1.39
CBX3-207ENST00000481300 LIN7BQ9HAP6 207 aa6.39□□□□□ -1.39
CBX3-207ENST00000481300 CYP4F12Q9HCS2 524 aa6.39□□□□□ -1.39
CBX3-207ENST00000481300 WDR64B1ANS9 1081 aa6.38□□□□□ -1.39
CBX3-207ENST00000481300 E9PSI1 815 aa6.38□□□□□ -1.39
CBX3-207ENST00000481300 CTSBP07858 339 aa6.38□□□□□ -1.39
CBX3-207ENST00000481300 GRIK1P39086 918 aa6.38□□□□□ -1.39
CBX3-207ENST00000481300 MCTP1Q6DN14 999 aa6.38□□□□□ -1.39
CBX3-207ENST00000481300 INTS5Q6P9B9 1019 aaKnown RBP6.38□□□□□ -1.39
CBX3-207ENST00000481300 DTX1Q86Y01 620 aa6.38□□□□□ -1.39
CBX3-207ENST00000481300 C2CD4AQ8NCU7 369 aaPredicted RBP6.38□□□□□ -1.39
CBX3-207ENST00000481300 MRRFQ96E11 262 aaKnown RBP6.38□□□□□ -1.39
CBX3-207ENST00000481300 EHD4Q9H223 541 aa6.38□□□□□ -1.39
CBX3-207ENST00000481300 PPP4R2Q9NY27 417 aa6.38□□□□□ -1.39
CBX3-207ENST00000481300 OAS3Q9Y6K5 1087 aaKnown RBP6.38□□□□□ -1.39
CBX3-207ENST00000481300 GIPC1O14908 333 aa6.37□□□□□ -1.39
CBX3-207ENST00000481300 SORBS3O60504 671 aa6.37□□□□□ -1.39
CBX3-207ENST00000481300 HOXA10P31260 410 aaPredicted RBP6.37□□□□□ -1.39
CBX3-207ENST00000481300 KIAA0319Q5VV43 1072 aa6.37□□□□□ -1.39
CBX3-207ENST00000481300 CDPF1Q6NVV7 123 aa6.37□□□□□ -1.39
CBX3-207ENST00000481300 PI16Q6UXB8 463 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms